RNA–Protein interactions for RNA: ENST00000596617.5

AC003002.4-201, humanhuman

APPRIS P1 TSL 4

Gene AC003002.4, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003002.4-201ENST00000596617 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
AC003002.4-201ENST00000596617 CCDC180Q9P1Z9 1646 aa24.71■■□□□ 1.55
AC003002.4-201ENST00000596617 ABCC9O60706 1549 aa24.13■■□□□ 1.45
AC003002.4-201ENST00000596617 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
AC003002.4-201ENST00000596617 NACADO15069 1562 aa23.22■■□□□ 1.31
AC003002.4-201ENST00000596617 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
AC003002.4-201ENST00000596617 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
AC003002.4-201ENST00000596617 DCAF1Q9Y4B6 1507 aa22.99■■□□□ 1.27
AC003002.4-201ENST00000596617 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
AC003002.4-201ENST00000596617 UNC13AQ9UPW8 1703 aa22.73■■□□□ 1.23
AC003002.4-201ENST00000596617 BICRAQ9NZM4 1560 aa22.6■■□□□ 1.21
AC003002.4-201ENST00000596617 PABPN1Q86U42 306 aaKnown RBP eCLIP22.47■■□□□ 1.19
AC003002.4-201ENST00000596617 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
AC003002.4-201ENST00000596617 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
AC003002.4-201ENST00000596617 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
AC003002.4-201ENST00000596617 EIF4G1Q04637 1599 aaKnown RBP21.97■■□□□ 1.11
AC003002.4-201ENST00000596617 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
AC003002.4-201ENST00000596617 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
AC003002.4-201ENST00000596617 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
AC003002.4-201ENST00000596617 BAZ1AQ9NRL2 1556 aaPredicted RBP21.47■■□□□ 1.03
AC003002.4-201ENST00000596617 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
AC003002.4-201ENST00000596617 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
AC003002.4-201ENST00000596617 SMARCA2P51531 1590 aa21.38■■□□□ 1.01
AC003002.4-201ENST00000596617 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
AC003002.4-201ENST00000596617 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
AC003002.4-201ENST00000596617 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
AC003002.4-201ENST00000596617 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
AC003002.4-201ENST00000596617 WIZO95785 1651 aa21.09■□□□□ 0.97
AC003002.4-201ENST00000596617 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
AC003002.4-201ENST00000596617 TOP2AP11388 1531 aaKnown RBP20.89■□□□□ 0.94
AC003002.4-201ENST00000596617 NESP48681 1621 aa20.89■□□□□ 0.93
AC003002.4-201ENST00000596617 LAMC3Q9Y6N6 1575 aa20.87■□□□□ 0.93
AC003002.4-201ENST00000596617 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
AC003002.4-201ENST00000596617 CADPSQ9ULU8 1353 aa20.75■□□□□ 0.91
AC003002.4-201ENST00000596617 CUX2O14529 1486 aa20.69■□□□□ 0.9
AC003002.4-201ENST00000596617 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
AC003002.4-201ENST00000596617 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
AC003002.4-201ENST00000596617 CFTRP13569 1480 aa20.66■□□□□ 0.9
AC003002.4-201ENST00000596617 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
AC003002.4-201ENST00000596617 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
AC003002.4-201ENST00000596617 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
AC003002.4-201ENST00000596617 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
AC003002.4-201ENST00000596617 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
AC003002.4-201ENST00000596617 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
AC003002.4-201ENST00000596617 WDR62O43379 1518 aa20.48■□□□□ 0.87
AC003002.4-201ENST00000596617 URB2Q14146 1524 aaKnown RBP20.35■□□□□ 0.85
AC003002.4-201ENST00000596617 SUPT5HO00267 1087 aaKnown RBP20.28■□□□□ 0.84
AC003002.4-201ENST00000596617 TOPBP1Q92547 1522 aa20.2■□□□□ 0.82
AC003002.4-201ENST00000596617 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
AC003002.4-201ENST00000596617 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
AC003002.4-201ENST00000596617 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
AC003002.4-201ENST00000596617 DNAJC5Q9H3Z4 198 aa20.06■□□□□ 0.8
AC003002.4-201ENST00000596617 POLA1P09884 1462 aaPredicted RBP20.04■□□□□ 0.8
AC003002.4-201ENST00000596617 CUX1P39880 1505 aa20.03■□□□□ 0.8
AC003002.4-201ENST00000596617 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
AC003002.4-201ENST00000596617 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
AC003002.4-201ENST00000596617 FGD5Q6ZNL6 1462 aa19.95■□□□□ 0.78
AC003002.4-201ENST00000596617 EIF4G3O43432 1585 aaKnown RBP19.95■□□□□ 0.78
AC003002.4-201ENST00000596617 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
AC003002.4-201ENST00000596617 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
AC003002.4-201ENST00000596617 SOGA1O94964 1423 aa19.88■□□□□ 0.77
AC003002.4-201ENST00000596617 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
AC003002.4-201ENST00000596617 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
AC003002.4-201ENST00000596617 AQRO60306 1485 aaKnown RBP eCLIP19.84■□□□□ 0.774e-10■■■■■ 60.8
AC003002.4-201ENST00000596617 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
AC003002.4-201ENST00000596617 WRNQ14191 1432 aaPredicted RBP eCLIP19.83■□□□□ 0.76
AC003002.4-201ENST00000596617 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
AC003002.4-201ENST00000596617 TDRD9Q8NDG6 1382 aaKnown RBP19.76■□□□□ 0.75
AC003002.4-201ENST00000596617 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
AC003002.4-201ENST00000596617 GRIN2BQ13224 1484 aa19.7■□□□□ 0.74
AC003002.4-201ENST00000596617 OSCARQ8IYS5 282 aa19.69■□□□□ 0.74
AC003002.4-201ENST00000596617 SNAPC4Q5SXM2 1469 aa19.68■□□□□ 0.74
AC003002.4-201ENST00000596617 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
AC003002.4-201ENST00000596617 CHD1O14646 1710 aa19.68■□□□□ 0.74
AC003002.4-201ENST00000596617 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
AC003002.4-201ENST00000596617 PBRM1Q86U86 1689 aa19.67■□□□□ 0.74
AC003002.4-201ENST00000596617 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
AC003002.4-201ENST00000596617 ERICH3Q5RHP9 1530 aa19.55■□□□□ 0.72
AC003002.4-201ENST00000596617 ADAMTS12P58397 1594 aa19.54■□□□□ 0.72
AC003002.4-201ENST00000596617 CLASP1Q7Z460 1538 aa19.52■□□□□ 0.72
AC003002.4-201ENST00000596617 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
AC003002.4-201ENST00000596617 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
AC003002.4-201ENST00000596617 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
AC003002.4-201ENST00000596617 ARHGEF11O15085 1522 aa19.48■□□□□ 0.71
AC003002.4-201ENST00000596617 FBLN2P98095 1184 aa19.48■□□□□ 0.71
AC003002.4-201ENST00000596617 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
AC003002.4-201ENST00000596617 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
AC003002.4-201ENST00000596617 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
AC003002.4-201ENST00000596617 NUP160Q12769 1436 aa19.42■□□□□ 0.7
AC003002.4-201ENST00000596617 KIF27Q86VH2 1401 aa19.41■□□□□ 0.7
AC003002.4-201ENST00000596617 CEP170Q5SW79 1584 aa19.38■□□□□ 0.69
AC003002.4-201ENST00000596617 IGF1RP08069 1367 aa19.35■□□□□ 0.69
AC003002.4-201ENST00000596617 CUL7Q14999 1698 aa19.35■□□□□ 0.69
AC003002.4-201ENST00000596617 ARAP1Q96P48 1450 aa19.33■□□□□ 0.68
AC003002.4-201ENST00000596617 SHROOM2Q13796 1616 aa19.29■□□□□ 0.68
AC003002.4-201ENST00000596617 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.68
AC003002.4-201ENST00000596617 TRIM41Q8WV44 630 aa19.25■□□□□ 0.67
AC003002.4-201ENST00000596617 ERCC6L2Q5T890 1561 aa19.21■□□□□ 0.67
AC003002.4-201ENST00000596617 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
AC003002.4-201ENST00000596617 KIAA0586Q9BVV6 1533 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms