RNA–Protein interactions for RNA: ENST00000596520.1

SNAPC2-205, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 2

Gene SNAPC2, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-205ENST00000596520 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
SNAPC2-205ENST00000596520 ABCC9O60706 1549 aa25.62■■□□□ 1.69
SNAPC2-205ENST00000596520 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
SNAPC2-205ENST00000596520 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
SNAPC2-205ENST00000596520 DNAJC5BQ9UF47 199 aa24.24■■□□□ 1.47
SNAPC2-205ENST00000596520 NACADO15069 1562 aa24.03■■□□□ 1.44
SNAPC2-205ENST00000596520 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
SNAPC2-205ENST00000596520 PABPN1Q86U42 306 aaKnown RBP eCLIP23.82■■□□□ 1.4
SNAPC2-205ENST00000596520 UNC13AQ9UPW8 1703 aa23.69■■□□□ 1.38
SNAPC2-205ENST00000596520 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
SNAPC2-205ENST00000596520 BICRAQ9NZM4 1560 aa23.55■■□□□ 1.36
SNAPC2-205ENST00000596520 ZCCHC6Q5VYS8 1495 aaKnown RBP23.28■■□□□ 1.32
SNAPC2-205ENST00000596520 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
SNAPC2-205ENST00000596520 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
SNAPC2-205ENST00000596520 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
SNAPC2-205ENST00000596520 SCRIBQ14160 1630 aa23.1■■□□□ 1.29
SNAPC2-205ENST00000596520 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
SNAPC2-205ENST00000596520 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
SNAPC2-205ENST00000596520 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
SNAPC2-205ENST00000596520 NCAPD3P42695 1498 aa22.2■■□□□ 1.14
SNAPC2-205ENST00000596520 CUX2O14529 1486 aa22.17■■□□□ 1.14
SNAPC2-205ENST00000596520 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
SNAPC2-205ENST00000596520 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
SNAPC2-205ENST00000596520 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
SNAPC2-205ENST00000596520 SMARCA4P51532 1647 aa22.01■■□□□ 1.11
SNAPC2-205ENST00000596520 HMGXB3Q12766 1538 aa22.01■■□□□ 1.11
SNAPC2-205ENST00000596520 NESP48681 1621 aa21.93■■□□□ 1.1
SNAPC2-205ENST00000596520 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
SNAPC2-205ENST00000596520 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
SNAPC2-205ENST00000596520 PEG3Q9GZU2 1588 aa21.79■■□□□ 1.08
SNAPC2-205ENST00000596520 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
SNAPC2-205ENST00000596520 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
SNAPC2-205ENST00000596520 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
SNAPC2-205ENST00000596520 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
SNAPC2-205ENST00000596520 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
SNAPC2-205ENST00000596520 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
SNAPC2-205ENST00000596520 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.03
SNAPC2-205ENST00000596520 WIZO95785 1651 aa21.4■■□□□ 1.02
SNAPC2-205ENST00000596520 WDR62O43379 1518 aa21.4■■□□□ 1.02
SNAPC2-205ENST00000596520 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
SNAPC2-205ENST00000596520 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
SNAPC2-205ENST00000596520 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
SNAPC2-205ENST00000596520 CFTRP13569 1480 aa21.22■□□□□ 0.99
SNAPC2-205ENST00000596520 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
SNAPC2-205ENST00000596520 OSCARQ8IYS5 282 aa21.13■□□□□ 0.97
SNAPC2-205ENST00000596520 TOP2AP11388 1531 aaKnown RBP21.13■□□□□ 0.97
SNAPC2-205ENST00000596520 URB2Q14146 1524 aaKnown RBP21.11■□□□□ 0.97
SNAPC2-205ENST00000596520 PRDM2Q13029 1718 aa20.95■□□□□ 0.94
SNAPC2-205ENST00000596520 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
SNAPC2-205ENST00000596520 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.94
SNAPC2-205ENST00000596520 CCDC88BA6NC98 1476 aa20.89■□□□□ 0.94
SNAPC2-205ENST00000596520 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
SNAPC2-205ENST00000596520 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
SNAPC2-205ENST00000596520 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
SNAPC2-205ENST00000596520 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
SNAPC2-205ENST00000596520 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
SNAPC2-205ENST00000596520 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
SNAPC2-205ENST00000596520 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
SNAPC2-205ENST00000596520 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
SNAPC2-205ENST00000596520 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.91e-8■■■■□ 21.1
SNAPC2-205ENST00000596520 CYB5RLQ6IPT4 315 aa20.66■□□□□ 0.9
SNAPC2-205ENST00000596520 TARBP1Q13395 1621 aaKnown RBP20.66■□□□□ 0.9
SNAPC2-205ENST00000596520 CHD1O14646 1710 aa20.64■□□□□ 0.89
SNAPC2-205ENST00000596520 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
SNAPC2-205ENST00000596520 FBLN2P98095 1184 aa20.61■□□□□ 0.89
SNAPC2-205ENST00000596520 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
SNAPC2-205ENST00000596520 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
SNAPC2-205ENST00000596520 TRHP20396 242 aaPredicted RBP20.53■□□□□ 0.88
SNAPC2-205ENST00000596520 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
SNAPC2-205ENST00000596520 SOGA1O94964 1423 aa20.52■□□□□ 0.87
SNAPC2-205ENST00000596520 SNAPC4Q5SXM2 1469 aa20.46■□□□□ 0.87
SNAPC2-205ENST00000596520 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
SNAPC2-205ENST00000596520 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
SNAPC2-205ENST00000596520 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
SNAPC2-205ENST00000596520 CLASP1Q7Z460 1538 aa20.4■□□□□ 0.86
SNAPC2-205ENST00000596520 MAGI1Q96QZ7 1491 aaPredicted RBP20.39■□□□□ 0.85
SNAPC2-205ENST00000596520 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
SNAPC2-205ENST00000596520 CUX1P39880 1505 aa20.38■□□□□ 0.85
SNAPC2-205ENST00000596520 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
SNAPC2-205ENST00000596520 SYNJ2O15056 1496 aa20.33■□□□□ 0.85
SNAPC2-205ENST00000596520 GAPVD1Q14C86 1478 aa20.27■□□□□ 0.84
SNAPC2-205ENST00000596520 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
SNAPC2-205ENST00000596520 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
SNAPC2-205ENST00000596520 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
SNAPC2-205ENST00000596520 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
SNAPC2-205ENST00000596520 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
SNAPC2-205ENST00000596520 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
SNAPC2-205ENST00000596520 ERCC6L2Q5T890 1561 aa20.08■□□□□ 0.8
SNAPC2-205ENST00000596520 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
SNAPC2-205ENST00000596520 ADAMTS12P58397 1594 aa20.05■□□□□ 0.8
SNAPC2-205ENST00000596520 NUP160Q12769 1436 aa20.05■□□□□ 0.8
SNAPC2-205ENST00000596520 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
SNAPC2-205ENST00000596520 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
SNAPC2-205ENST00000596520 TOP2BQ02880 1626 aa19.99■□□□□ 0.79
SNAPC2-205ENST00000596520 BIVM-ERCC5R4GMW8 1640 aa19.99■□□□□ 0.79
SNAPC2-205ENST00000596520 SHROOM2Q13796 1616 aa19.97■□□□□ 0.79
SNAPC2-205ENST00000596520 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
SNAPC2-205ENST00000596520 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
SNAPC2-205ENST00000596520 JPH4Q96JJ6 628 aa19.85■□□□□ 0.77
SNAPC2-205ENST00000596520 KIF13AQ9H1H9 1805 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms