RNA–Protein interactions for RNA: ENST00000596496.1

CCDC94-202, Transcript of Coiled-coil domain-containing protein 94, humanhuman

TSL 3

Gene CCDC94, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-202ENST00000596496 NISCHQ9Y2I1 1504 aa24.49■■□□□ 1.51
CCDC94-202ENST00000596496 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
CCDC94-202ENST00000596496 ABCC9O60706 1549 aa21.35■■□□□ 1.01
CCDC94-202ENST00000596496 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
CCDC94-202ENST00000596496 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
CCDC94-202ENST00000596496 NACADO15069 1562 aa20.48■□□□□ 0.87
CCDC94-202ENST00000596496 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
CCDC94-202ENST00000596496 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
CCDC94-202ENST00000596496 UNC13AQ9UPW8 1703 aa20.21■□□□□ 0.83
CCDC94-202ENST00000596496 DCAF8L2P0C7V8 631 aa20.18■□□□□ 0.82
CCDC94-202ENST00000596496 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
CCDC94-202ENST00000596496 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC94-202ENST00000596496 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
CCDC94-202ENST00000596496 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
CCDC94-202ENST00000596496 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
CCDC94-202ENST00000596496 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
CCDC94-202ENST00000596496 CC2D2AQ9P2K1 1620 aa19.39■□□□□ 0.69
CCDC94-202ENST00000596496 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
CCDC94-202ENST00000596496 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
CCDC94-202ENST00000596496 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.62
CCDC94-202ENST00000596496 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.62
CCDC94-202ENST00000596496 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
CCDC94-202ENST00000596496 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
CCDC94-202ENST00000596496 RSF1Q96T23 1441 aaPredicted RBP18.84■□□□□ 0.61
CCDC94-202ENST00000596496 SMARCA2P51531 1590 aa18.83■□□□□ 0.6
CCDC94-202ENST00000596496 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
CCDC94-202ENST00000596496 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
CCDC94-202ENST00000596496 WIZO95785 1651 aa18.75■□□□□ 0.59
CCDC94-202ENST00000596496 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
CCDC94-202ENST00000596496 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
CCDC94-202ENST00000596496 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
CCDC94-202ENST00000596496 NESP48681 1621 aa18.48■□□□□ 0.55
CCDC94-202ENST00000596496 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
CCDC94-202ENST00000596496 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
CCDC94-202ENST00000596496 CUX2O14529 1486 aa18.33■□□□□ 0.52
CCDC94-202ENST00000596496 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
CCDC94-202ENST00000596496 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
CCDC94-202ENST00000596496 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
CCDC94-202ENST00000596496 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
CCDC94-202ENST00000596496 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
CCDC94-202ENST00000596496 CFTRP13569 1480 aa18.19■□□□□ 0.5
CCDC94-202ENST00000596496 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
CCDC94-202ENST00000596496 WDR62O43379 1518 aa18.09■□□□□ 0.49
CCDC94-202ENST00000596496 MRC2Q9UBG0 1479 aa18.09■□□□□ 0.49
CCDC94-202ENST00000596496 FANCD2Q9BXW9 1451 aa18.08■□□□□ 0.49
CCDC94-202ENST00000596496 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
CCDC94-202ENST00000596496 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
CCDC94-202ENST00000596496 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
CCDC94-202ENST00000596496 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
CCDC94-202ENST00000596496 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
CCDC94-202ENST00000596496 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
CCDC94-202ENST00000596496 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
CCDC94-202ENST00000596496 IFT140Q96RY7 1462 aa17.7■□□□□ 0.42
CCDC94-202ENST00000596496 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
CCDC94-202ENST00000596496 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
CCDC94-202ENST00000596496 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
CCDC94-202ENST00000596496 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
CCDC94-202ENST00000596496 CUX1P39880 1505 aa17.68■□□□□ 0.42
CCDC94-202ENST00000596496 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
CCDC94-202ENST00000596496 TOP2BQ02880 1626 aa17.67■□□□□ 0.42
CCDC94-202ENST00000596496 POLA1P09884 1462 aaPredicted RBP17.64■□□□□ 0.41
CCDC94-202ENST00000596496 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
CCDC94-202ENST00000596496 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
CCDC94-202ENST00000596496 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
CCDC94-202ENST00000596496 RAD54L2Q9Y4B4 1467 aa17.55■□□□□ 0.4
CCDC94-202ENST00000596496 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
CCDC94-202ENST00000596496 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC94-202ENST00000596496 SOGA1O94964 1423 aa17.5■□□□□ 0.39
CCDC94-202ENST00000596496 CHD1O14646 1710 aa17.46■□□□□ 0.39
CCDC94-202ENST00000596496 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
CCDC94-202ENST00000596496 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
CCDC94-202ENST00000596496 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
CCDC94-202ENST00000596496 ABCA5Q8WWZ7 1642 aa17.41■□□□□ 0.38
CCDC94-202ENST00000596496 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
CCDC94-202ENST00000596496 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
CCDC94-202ENST00000596496 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
CCDC94-202ENST00000596496 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
CCDC94-202ENST00000596496 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
CCDC94-202ENST00000596496 GAPVD1Q14C86 1478 aa17.32■□□□□ 0.36
CCDC94-202ENST00000596496 RIMBP3CA6NJZ7 1639 aa17.31■□□□□ 0.36
CCDC94-202ENST00000596496 RIMBP3BA6NNM3 1639 aa17.31■□□□□ 0.36
CCDC94-202ENST00000596496 RIMBP3Q9UFD9 1639 aa17.31■□□□□ 0.36
CCDC94-202ENST00000596496 EEA1Q15075 1411 aa17.29■□□□□ 0.36
CCDC94-202ENST00000596496 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
CCDC94-202ENST00000596496 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
CCDC94-202ENST00000596496 ARHGEF11O15085 1522 aa17.26■□□□□ 0.35
CCDC94-202ENST00000596496 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
CCDC94-202ENST00000596496 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
CCDC94-202ENST00000596496 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
CCDC94-202ENST00000596496 IGF1RP08069 1367 aa17.2■□□□□ 0.34
CCDC94-202ENST00000596496 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
CCDC94-202ENST00000596496 FBLN2P98095 1184 aa17.19■□□□□ 0.34
CCDC94-202ENST00000596496 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
CCDC94-202ENST00000596496 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
CCDC94-202ENST00000596496 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
CCDC94-202ENST00000596496 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
CCDC94-202ENST00000596496 KIF21BO75037 1637 aa17.14■□□□□ 0.33
CCDC94-202ENST00000596496 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
CCDC94-202ENST00000596496 FHAD1B1AJZ9 1412 aa17.12■□□□□ 0.33
CCDC94-202ENST00000596496 CUL7Q14999 1698 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms