RNA–Protein interactions for RNA: ENST00000596295.1

HNRNPM-205, Transcript of heterogeneous nuclear ribonucleoprotein M, humanhuman

TSL 3

Gene HNRNPM, Length 910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPM-205ENST00000596295 NISCHQ9Y2I1 1504 aa43.98■■■■■ 4.63
HNRNPM-205ENST00000596295 CCDC180Q9P1Z9 1646 aa39.22■■■■□ 3.87
HNRNPM-205ENST00000596295 ABCC9O60706 1549 aa38.39■■■■□ 3.74
HNRNPM-205ENST00000596295 RB1CC1Q8TDY2 1594 aa36.98■■■■□ 3.51
HNRNPM-205ENST00000596295 NACADO15069 1562 aa36.92■■■■□ 3.5
HNRNPM-205ENST00000596295 MYO15BQ96JP2 1530 aa36.74■■■■□ 3.47
HNRNPM-205ENST00000596295 ZCCHC6Q5VYS8 1495 aaKnown RBP36.63■■■■□ 3.45
HNRNPM-205ENST00000596295 DCAF8L2P0C7V8 631 aa36.63■■■■□ 3.45
HNRNPM-205ENST00000596295 DCAF1Q9Y4B6 1507 aa36.49■■■■□ 3.43
HNRNPM-205ENST00000596295 UNC13AQ9UPW8 1703 aa35.95■■■■□ 3.35
HNRNPM-205ENST00000596295 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
HNRNPM-205ENST00000596295 BICRAQ9NZM4 1560 aa35.77■■■■□ 3.32
HNRNPM-205ENST00000596295 SCRIBQ14160 1630 aa35.65■■■■□ 3.3
HNRNPM-205ENST00000596295 SHROOM4Q9ULL8 1493 aa35.65■■■■□ 3.3
HNRNPM-205ENST00000596295 DNAJC5BQ9UF47 199 aa35.27■■■■□ 3.24
HNRNPM-205ENST00000596295 EIF4G1Q04637 1599 aaKnown RBP34.89■■■■□ 3.18
HNRNPM-205ENST00000596295 CC2D2AQ9P2K1 1620 aa34.74■■■■□ 3.15
HNRNPM-205ENST00000596295 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
HNRNPM-205ENST00000596295 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
HNRNPM-205ENST00000596295 SMARCA4P51532 1647 aa34.14■■■■□ 3.06
HNRNPM-205ENST00000596295 NCAPD3P42695 1498 aa34.06■■■■□ 3.04
HNRNPM-205ENST00000596295 SMARCA2P51531 1590 aa34.02■■■■□ 3.04
HNRNPM-205ENST00000596295 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.03
HNRNPM-205ENST00000596295 HMGXB3Q12766 1538 aa33.91■■■■□ 3.02
HNRNPM-205ENST00000596295 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
HNRNPM-205ENST00000596295 MROH2BQ7Z745 1585 aa33.82■■■■□ 3
HNRNPM-205ENST00000596295 BAZ1BQ9UIG0 1483 aaKnown RBP33.75■■■□□ 2.99
HNRNPM-205ENST00000596295 RSF1Q96T23 1441 aaPredicted RBP33.42■■■□□ 2.94
HNRNPM-205ENST00000596295 WIZO95785 1651 aa33.4■■■□□ 2.94
HNRNPM-205ENST00000596295 LAMC3Q9Y6N6 1575 aa33.19■■■□□ 2.9
HNRNPM-205ENST00000596295 ERCC6Q03468 1493 aa33.18■■■□□ 2.9
HNRNPM-205ENST00000596295 TOP2AP11388 1531 aaKnown RBP33.18■■■□□ 2.9
HNRNPM-205ENST00000596295 NESP48681 1621 aa33.14■■■□□ 2.9
HNRNPM-205ENST00000596295 CADPSQ9ULU8 1353 aa33.03■■■□□ 2.88
HNRNPM-205ENST00000596295 PDS5BQ9NTI5 1447 aa32.99■■■□□ 2.87
HNRNPM-205ENST00000596295 CUX2O14529 1486 aa32.96■■■□□ 2.87
HNRNPM-205ENST00000596295 CFTRP13569 1480 aa32.82■■■□□ 2.84
HNRNPM-205ENST00000596295 THOC2Q8NI27 1593 aaKnown RBP32.76■■■□□ 2.84
HNRNPM-205ENST00000596295 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
HNRNPM-205ENST00000596295 CCDC88BA6NC98 1476 aa32.71■■■□□ 2.83
HNRNPM-205ENST00000596295 FANCD2Q9BXW9 1451 aa32.64■■■□□ 2.82
HNRNPM-205ENST00000596295 CEP164Q9UPV0 1460 aa32.64■■■□□ 2.82
HNRNPM-205ENST00000596295 MRC2Q9UBG0 1479 aa32.63■■■□□ 2.81
HNRNPM-205ENST00000596295 WDR62O43379 1518 aa32.53■■■□□ 2.8
HNRNPM-205ENST00000596295 PRDM2Q13029 1718 aa32.49■■■□□ 2.79
HNRNPM-205ENST00000596295 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
HNRNPM-205ENST00000596295 URB2Q14146 1524 aaKnown RBP32.29■■■□□ 2.76
HNRNPM-205ENST00000596295 ABCC8Q09428 1581 aa32.18■■■□□ 2.74
HNRNPM-205ENST00000596295 TOPBP1Q92547 1522 aa32.09■■■□□ 2.73
HNRNPM-205ENST00000596295 DNMBPQ6XZF7 1577 aa32.07■■■□□ 2.72
HNRNPM-205ENST00000596295 DNAJC5Q9H3Z4 198 aa32.02■■■□□ 2.72
HNRNPM-205ENST00000596295 IFT140Q96RY7 1462 aa31.99■■■□□ 2.71
HNRNPM-205ENST00000596295 POLA1P09884 1462 aaPredicted RBP31.82■■■□□ 2.68
HNRNPM-205ENST00000596295 CUX1P39880 1505 aa31.75■■■□□ 2.67
HNRNPM-205ENST00000596295 ZNF608Q9ULD9 1512 aaPredicted RBP31.74■■■□□ 2.67
HNRNPM-205ENST00000596295 TARBP1Q13395 1621 aaKnown RBP31.73■■■□□ 2.67
HNRNPM-205ENST00000596295 FGD5Q6ZNL6 1462 aa31.7■■■□□ 2.66
HNRNPM-205ENST00000596295 EIF4G3O43432 1585 aaKnown RBP31.66■■■□□ 2.66
HNRNPM-205ENST00000596295 SOGA1O94964 1423 aa31.66■■■□□ 2.66
HNRNPM-205ENST00000596295 WDR97A6NE52 1622 aa31.63■■■□□ 2.65
HNRNPM-205ENST00000596295 RAD54L2Q9Y4B4 1467 aa31.59■■■□□ 2.65
HNRNPM-205ENST00000596295 WRNQ14191 1432 aaPredicted RBP eCLIP31.55■■■□□ 2.64
HNRNPM-205ENST00000596295 AQRO60306 1485 aaKnown RBP eCLIP31.53■■■□□ 2.644e-9■■■■■ 29.6
HNRNPM-205ENST00000596295 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
HNRNPM-205ENST00000596295 OSCARQ8IYS5 282 aa31.48■■■□□ 2.63
HNRNPM-205ENST00000596295 BIVM-ERCC5R4GMW8 1640 aa31.47■■■□□ 2.63
HNRNPM-205ENST00000596295 TDRD9Q8NDG6 1382 aaKnown RBP31.45■■■□□ 2.63
HNRNPM-205ENST00000596295 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
HNRNPM-205ENST00000596295 SYNJ1O43426 1573 aa31.41■■■□□ 2.62
HNRNPM-205ENST00000596295 GRIN2BQ13224 1484 aa31.37■■■□□ 2.61
HNRNPM-205ENST00000596295 MAGI1Q96QZ7 1491 aaPredicted RBP31.33■■■□□ 2.61
HNRNPM-205ENST00000596295 GAPVD1Q14C86 1478 aa31.32■■■□□ 2.6
HNRNPM-205ENST00000596295 SNAPC4Q5SXM2 1469 aa31.29■■■□□ 2.6
HNRNPM-205ENST00000596295 ABCA5Q8WWZ7 1642 aa31.29■■■□□ 2.6
HNRNPM-205ENST00000596295 CHD1O14646 1710 aa31.21■■■□□ 2.59
HNRNPM-205ENST00000596295 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
HNRNPM-205ENST00000596295 SYNJ2O15056 1496 aa31.19■■■□□ 2.58
HNRNPM-205ENST00000596295 FBLN2P98095 1184 aa31.17■■■□□ 2.58
HNRNPM-205ENST00000596295 CHMP7Q8WUX9 453 aaPredicted RBP31.13■■■□□ 2.57
HNRNPM-205ENST00000596295 ERICH3Q5RHP9 1530 aa31.08■■■□□ 2.57
HNRNPM-205ENST00000596295 ADAMTS12P58397 1594 aa31.02■■■□□ 2.56
HNRNPM-205ENST00000596295 FHAD1B1AJZ9 1412 aa30.98■■■□□ 2.55
HNRNPM-205ENST00000596295 ARHGEF11O15085 1522 aa30.98■■■□□ 2.55
HNRNPM-205ENST00000596295 CLASP1Q7Z460 1538 aa30.98■■■□□ 2.55
HNRNPM-205ENST00000596295 GRIN2AQ12879 1464 aa30.95■■■□□ 2.54
HNRNPM-205ENST00000596295 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.54
HNRNPM-205ENST00000596295 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.54
HNRNPM-205ENST00000596295 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.54
HNRNPM-205ENST00000596295 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
HNRNPM-205ENST00000596295 NUP160Q12769 1436 aa30.83■■■□□ 2.53
HNRNPM-205ENST00000596295 TRIM41Q8WV44 630 aa30.81■■■□□ 2.52
HNRNPM-205ENST00000596295 IGF1RP08069 1367 aa30.76■■■□□ 2.51
HNRNPM-205ENST00000596295 CUL7Q14999 1698 aa30.75■■■□□ 2.51
HNRNPM-205ENST00000596295 CEP170Q5SW79 1584 aa30.75■■■□□ 2.51
HNRNPM-205ENST00000596295 ARAP1Q96P48 1450 aa30.7■■■□□ 2.51
HNRNPM-205ENST00000596295 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
HNRNPM-205ENST00000596295 SHROOM2Q13796 1616 aa30.59■■■□□ 2.49
HNRNPM-205ENST00000596295 CARMIL1Q5VZK9 1371 aa30.58■■■□□ 2.49
HNRNPM-205ENST00000596295 RUSC2Q8N2Y8 1516 aa30.57■■■□□ 2.48
HNRNPM-205ENST00000596295 KIAA0586Q9BVV6 1533 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms