RNA–Protein interactions for RNA: ENST00000596256.1

FARP1-216, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-216ENST00000596256 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
FARP1-216ENST00000596256 CCDC180Q9P1Z9 1646 aa33.27■■■□□ 2.92
FARP1-216ENST00000596256 ABCC9O60706 1549 aa33.16■■■□□ 2.9
FARP1-216ENST00000596256 RB1CC1Q8TDY2 1594 aa31.6■■■□□ 2.65
FARP1-216ENST00000596256 NACADO15069 1562 aa31.4■■■□□ 2.62
FARP1-216ENST00000596256 DCAF8L2P0C7V8 631 aa31.26■■■□□ 2.59
FARP1-216ENST00000596256 DNAJC5BQ9UF47 199 aa31.02■■■□□ 2.56
FARP1-216ENST00000596256 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
FARP1-216ENST00000596256 UNC13AQ9UPW8 1703 aa30.97■■■□□ 2.55
FARP1-216ENST00000596256 PABPN1Q86U42 306 aaKnown RBP eCLIP30.87■■■□□ 2.533e-7■□□□□ 8
FARP1-216ENST00000596256 ZCCHC6Q5VYS8 1495 aaKnown RBP30.78■■■□□ 2.52
FARP1-216ENST00000596256 BICRAQ9NZM4 1560 aa30.71■■■□□ 2.51
FARP1-216ENST00000596256 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
FARP1-216ENST00000596256 SCRIBQ14160 1630 aa30.33■■■□□ 2.45
FARP1-216ENST00000596256 SHROOM4Q9ULL8 1493 aa30.24■■■□□ 2.43
FARP1-216ENST00000596256 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
FARP1-216ENST00000596256 EIF4G1Q04637 1599 aaKnown RBP29.92■■■□□ 2.38
FARP1-216ENST00000596256 CECR2Q9BXF3 1484 aa29.84■■■□□ 2.37
FARP1-216ENST00000596256 NCAPD3P42695 1498 aa28.98■■■□□ 2.23
FARP1-216ENST00000596256 SMARCA4P51532 1647 aa28.94■■■□□ 2.22
FARP1-216ENST00000596256 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
FARP1-216ENST00000596256 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
FARP1-216ENST00000596256 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
FARP1-216ENST00000596256 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
FARP1-216ENST00000596256 PEG3Q9GZU2 1588 aa28.65■■■□□ 2.18
FARP1-216ENST00000596256 BAZ1BQ9UIG0 1483 aaKnown RBP28.64■■■□□ 2.17
FARP1-216ENST00000596256 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
FARP1-216ENST00000596256 ERCC6Q03468 1493 aa28.59■■■□□ 2.17
FARP1-216ENST00000596256 NESP48681 1621 aa28.53■■■□□ 2.16
FARP1-216ENST00000596256 CUX2O14529 1486 aa28.5■■■□□ 2.15
FARP1-216ENST00000596256 DNAJC5Q9H3Z4 198 aa28.36■■■□□ 2.13
FARP1-216ENST00000596256 LAMC3Q9Y6N6 1575 aa28.33■■■□□ 2.12
FARP1-216ENST00000596256 WIZO95785 1651 aa28.3■■■□□ 2.12
FARP1-216ENST00000596256 THOC2Q8NI27 1593 aaKnown RBP28.22■■■□□ 2.11
FARP1-216ENST00000596256 KIF21AQ7Z4S6 1674 aa28.19■■■□□ 2.1
FARP1-216ENST00000596256 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
FARP1-216ENST00000596256 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
FARP1-216ENST00000596256 RSF1Q96T23 1441 aaPredicted RBP28.04■■■□□ 2.08
FARP1-216ENST00000596256 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
FARP1-216ENST00000596256 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.06
FARP1-216ENST00000596256 WDR62O43379 1518 aa27.84■■■□□ 2.05
FARP1-216ENST00000596256 CFTRP13569 1480 aa27.82■■■□□ 2.04
FARP1-216ENST00000596256 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
FARP1-216ENST00000596256 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
FARP1-216ENST00000596256 PRDM2Q13029 1718 aa27.61■■■□□ 2.01
FARP1-216ENST00000596256 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
FARP1-216ENST00000596256 URB2Q14146 1524 aaKnown RBP27.58■■■□□ 2.01
FARP1-216ENST00000596256 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
FARP1-216ENST00000596256 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
FARP1-216ENST00000596256 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
FARP1-216ENST00000596256 OSCARQ8IYS5 282 aa27.21■■□□□ 1.95
FARP1-216ENST00000596256 ABCC8Q09428 1581 aa27.21■■□□□ 1.95
FARP1-216ENST00000596256 DNMBPQ6XZF7 1577 aa27.2■■□□□ 1.94
FARP1-216ENST00000596256 TRIM41Q8WV44 630 aa27.17■■□□□ 1.94
FARP1-216ENST00000596256 EIF4G3O43432 1585 aaKnown RBP27.09■■□□□ 1.93
FARP1-216ENST00000596256 TARBP1Q13395 1621 aaKnown RBP27.06■■□□□ 1.92
FARP1-216ENST00000596256 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
FARP1-216ENST00000596256 AQRO60306 1485 aaKnown RBP eCLIP26.98■■□□□ 1.918e-10■■□□□ 13.6
FARP1-216ENST00000596256 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
FARP1-216ENST00000596256 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
FARP1-216ENST00000596256 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
FARP1-216ENST00000596256 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
FARP1-216ENST00000596256 CHD1O14646 1710 aa26.89■■□□□ 1.9
FARP1-216ENST00000596256 SOGA1O94964 1423 aa26.89■■□□□ 1.89
FARP1-216ENST00000596256 SUPT5HO00267 1087 aaKnown RBP26.88■■□□□ 1.89
FARP1-216ENST00000596256 CUX1P39880 1505 aa26.87■■□□□ 1.89
FARP1-216ENST00000596256 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
FARP1-216ENST00000596256 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.88
FARP1-216ENST00000596256 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
FARP1-216ENST00000596256 FBLN2P98095 1184 aa26.76■■□□□ 1.87
FARP1-216ENST00000596256 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
FARP1-216ENST00000596256 SNAPC4Q5SXM2 1469 aa26.7■■□□□ 1.87
FARP1-216ENST00000596256 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
FARP1-216ENST00000596256 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
FARP1-216ENST00000596256 PBRM1Q86U86 1689 aa26.6■■□□□ 1.85
FARP1-216ENST00000596256 CYB5RLQ6IPT4 315 aa26.58■■□□□ 1.85
FARP1-216ENST00000596256 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
FARP1-216ENST00000596256 GAPVD1Q14C86 1478 aa26.56■■□□□ 1.84
FARP1-216ENST00000596256 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
FARP1-216ENST00000596256 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
FARP1-216ENST00000596256 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
FARP1-216ENST00000596256 SYNJ2O15056 1496 aa26.54■■□□□ 1.84
FARP1-216ENST00000596256 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
FARP1-216ENST00000596256 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
FARP1-216ENST00000596256 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
FARP1-216ENST00000596256 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
FARP1-216ENST00000596256 WRNQ14191 1432 aaPredicted RBP eCLIP26.46■■□□□ 1.83
FARP1-216ENST00000596256 ADAMTS12P58397 1594 aa26.32■■□□□ 1.8
FARP1-216ENST00000596256 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
FARP1-216ENST00000596256 TRHP20396 242 aaPredicted RBP26.24■■□□□ 1.79
FARP1-216ENST00000596256 CEP170Q5SW79 1584 aa26.23■■□□□ 1.79
FARP1-216ENST00000596256 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
FARP1-216ENST00000596256 FHAD1B1AJZ9 1412 aa26.22■■□□□ 1.79
FARP1-216ENST00000596256 NUP160Q12769 1436 aa26.21■■□□□ 1.79
FARP1-216ENST00000596256 ERCC6L2Q5T890 1561 aa26.17■■□□□ 1.78
FARP1-216ENST00000596256 SHROOM2Q13796 1616 aa26.11■■□□□ 1.77
FARP1-216ENST00000596256 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
FARP1-216ENST00000596256 PRG4Q92954 1404 aaPredicted RBP25.95■■□□□ 1.74
FARP1-216ENST00000596256 JPH4Q96JJ6 628 aa25.93■■□□□ 1.74
FARP1-216ENST00000596256 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms