RNA–Protein interactions for RNA: ENST00000596016.5

STRN4-213, Transcript of striatin 4, humanhuman

TSL 4

Gene STRN4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-213ENST00000596016 NISCHQ9Y2I1 1504 aa32.81■■■□□ 2.84
STRN4-213ENST00000596016 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
STRN4-213ENST00000596016 ABCC9O60706 1549 aa28.76■■■□□ 2.19
STRN4-213ENST00000596016 RB1CC1Q8TDY2 1594 aa27.57■■■□□ 2
STRN4-213ENST00000596016 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
STRN4-213ENST00000596016 NACADO15069 1562 aa27.52■■■□□ 2
STRN4-213ENST00000596016 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
STRN4-213ENST00000596016 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
STRN4-213ENST00000596016 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
STRN4-213ENST00000596016 PABPN1Q86U42 306 aaKnown RBP eCLIP26.91■■□□□ 1.9
STRN4-213ENST00000596016 UNC13AQ9UPW8 1703 aa26.83■■□□□ 1.89
STRN4-213ENST00000596016 BICRAQ9NZM4 1560 aa26.72■■□□□ 1.87
STRN4-213ENST00000596016 SCRIBQ14160 1630 aa26.62■■□□□ 1.85
STRN4-213ENST00000596016 DNAJC5BQ9UF47 199 aa26.61■■□□□ 1.85
STRN4-213ENST00000596016 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
STRN4-213ENST00000596016 EIF4G1Q04637 1599 aaKnown RBP26.04■■□□□ 1.76
STRN4-213ENST00000596016 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
STRN4-213ENST00000596016 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
STRN4-213ENST00000596016 SMARCA4P51532 1647 aa25.45■■□□□ 1.66
STRN4-213ENST00000596016 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
STRN4-213ENST00000596016 NCAPD3P42695 1498 aa25.42■■□□□ 1.66
STRN4-213ENST00000596016 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
STRN4-213ENST00000596016 SMARCA2P51531 1590 aa25.34■■□□□ 1.65
STRN4-213ENST00000596016 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
STRN4-213ENST00000596016 HMGXB3Q12766 1538 aa25.23■■□□□ 1.63
STRN4-213ENST00000596016 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
STRN4-213ENST00000596016 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
STRN4-213ENST00000596016 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
STRN4-213ENST00000596016 WIZO95785 1651 aa24.96■■□□□ 1.59
STRN4-213ENST00000596016 NESP48681 1621 aa24.83■■□□□ 1.56
STRN4-213ENST00000596016 ERCC6Q03468 1493 aa24.81■■□□□ 1.56
STRN4-213ENST00000596016 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
STRN4-213ENST00000596016 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
STRN4-213ENST00000596016 CADPSQ9ULU8 1353 aa24.69■■□□□ 1.54
STRN4-213ENST00000596016 PDS5BQ9NTI5 1447 aa24.63■■□□□ 1.53
STRN4-213ENST00000596016 CUX2O14529 1486 aa24.59■■□□□ 1.53
STRN4-213ENST00000596016 DNAJC5Q9H3Z4 198 aa24.53■■□□□ 1.52
STRN4-213ENST00000596016 CFTRP13569 1480 aa24.49■■□□□ 1.51
STRN4-213ENST00000596016 CCDC88BA6NC98 1476 aa24.45■■□□□ 1.51
STRN4-213ENST00000596016 KIF21AQ7Z4S6 1674 aa24.45■■□□□ 1.5
STRN4-213ENST00000596016 THOC2Q8NI27 1593 aaKnown RBP24.43■■□□□ 1.5
STRN4-213ENST00000596016 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
STRN4-213ENST00000596016 MRC2Q9UBG0 1479 aa24.35■■□□□ 1.49
STRN4-213ENST00000596016 CEP164Q9UPV0 1460 aa24.35■■□□□ 1.49
STRN4-213ENST00000596016 SUPT5HO00267 1087 aaKnown RBP24.26■■□□□ 1.47
STRN4-213ENST00000596016 WDR62O43379 1518 aa24.25■■□□□ 1.47
STRN4-213ENST00000596016 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
STRN4-213ENST00000596016 URB2Q14146 1524 aaKnown RBP24.13■■□□□ 1.45
STRN4-213ENST00000596016 ABCC8Q09428 1581 aa23.98■■□□□ 1.43
STRN4-213ENST00000596016 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
STRN4-213ENST00000596016 DNMBPQ6XZF7 1577 aa23.9■■□□□ 1.42
STRN4-213ENST00000596016 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
STRN4-213ENST00000596016 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
STRN4-213ENST00000596016 POLA1P09884 1462 aaPredicted RBP23.75■■□□□ 1.39
STRN4-213ENST00000596016 CUX1P39880 1505 aa23.71■■□□□ 1.39
STRN4-213ENST00000596016 SOGA1O94964 1423 aa23.69■■□□□ 1.38
STRN4-213ENST00000596016 TARBP1Q13395 1621 aaKnown RBP23.67■■□□□ 1.38
STRN4-213ENST00000596016 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
STRN4-213ENST00000596016 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
STRN4-213ENST00000596016 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.371e-6■■■■□ 21
STRN4-213ENST00000596016 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
STRN4-213ENST00000596016 EIF4G3O43432 1585 aaKnown RBP23.6■■□□□ 1.37
STRN4-213ENST00000596016 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
STRN4-213ENST00000596016 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
STRN4-213ENST00000596016 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
STRN4-213ENST00000596016 TOP2BQ02880 1626 aa23.45■■□□□ 1.34
STRN4-213ENST00000596016 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
STRN4-213ENST00000596016 ABCA10Q8WWZ4 1543 aa23.43■■□□□ 1.34
STRN4-213ENST00000596016 BIVM-ERCC5R4GMW8 1640 aa23.42■■□□□ 1.34
STRN4-213ENST00000596016 FBLN2P98095 1184 aa23.42■■□□□ 1.34
STRN4-213ENST00000596016 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
STRN4-213ENST00000596016 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.34
STRN4-213ENST00000596016 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
STRN4-213ENST00000596016 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
STRN4-213ENST00000596016 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
STRN4-213ENST00000596016 CHMP7Q8WUX9 453 aaPredicted RBP23.34■■□□□ 1.33
STRN4-213ENST00000596016 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
STRN4-213ENST00000596016 CHD1O14646 1710 aa23.3■■□□□ 1.32
STRN4-213ENST00000596016 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
STRN4-213ENST00000596016 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
STRN4-213ENST00000596016 ARHGEF11O15085 1522 aa23.15■■□□□ 1.3
STRN4-213ENST00000596016 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
STRN4-213ENST00000596016 RIMBP3CA6NJZ7 1639 aa23.14■■□□□ 1.29
STRN4-213ENST00000596016 RIMBP3BA6NNM3 1639 aa23.14■■□□□ 1.29
STRN4-213ENST00000596016 RIMBP3Q9UFD9 1639 aa23.14■■□□□ 1.29
STRN4-213ENST00000596016 FHAD1B1AJZ9 1412 aa23.12■■□□□ 1.29
STRN4-213ENST00000596016 CLASP1Q7Z460 1538 aa23.11■■□□□ 1.29
STRN4-213ENST00000596016 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
STRN4-213ENST00000596016 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
STRN4-213ENST00000596016 KIF27Q86VH2 1401 aa23.08■■□□□ 1.28
STRN4-213ENST00000596016 CYB5RLQ6IPT4 315 aa23.02■■□□□ 1.28
STRN4-213ENST00000596016 IGF1RP08069 1367 aa23.01■■□□□ 1.27
STRN4-213ENST00000596016 NUP160Q12769 1436 aa23■■□□□ 1.27
STRN4-213ENST00000596016 ARAP1Q96P48 1450 aa22.96■■□□□ 1.27
STRN4-213ENST00000596016 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
STRN4-213ENST00000596016 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
STRN4-213ENST00000596016 CUL7Q14999 1698 aa22.87■■□□□ 1.25
STRN4-213ENST00000596016 JPH4Q96JJ6 628 aa22.83■■□□□ 1.25
STRN4-213ENST00000596016 RUSC2Q8N2Y8 1516 aa22.8■■□□□ 1.24
STRN4-213ENST00000596016 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms