RNA–Protein interactions for RNA: ENST00000595961.5

TIMM50-206, Transcript of translocase of inner mitochondrial membrane 50, humanhuman

TSL 2

Gene TIMM50, Length 2,576 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM50-206ENST00000595961 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
TIMM50-206ENST00000595961 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
TIMM50-206ENST00000595961 ZCCHC6Q5VYS8 1495 aaKnown RBP23.79■■□□□ 1.4
TIMM50-206ENST00000595961 SHROOM4Q9ULL8 1493 aa23.72■■□□□ 1.39
TIMM50-206ENST00000595961 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
TIMM50-206ENST00000595961 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
TIMM50-206ENST00000595961 SUPT5HO00267 1087 aaKnown RBP23.06■■□□□ 1.28
TIMM50-206ENST00000595961 ABCC9O60706 1549 aa22.76■■□□□ 1.23
TIMM50-206ENST00000595961 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
TIMM50-206ENST00000595961 SCRIBQ14160 1630 aa22.63■■□□□ 1.21
TIMM50-206ENST00000595961 NACADO15069 1562 aa22.48■■□□□ 1.19
TIMM50-206ENST00000595961 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
TIMM50-206ENST00000595961 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
TIMM50-206ENST00000595961 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
TIMM50-206ENST00000595961 CECR2Q9BXF3 1484 aa22.03■■□□□ 1.12
TIMM50-206ENST00000595961 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
TIMM50-206ENST00000595961 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
TIMM50-206ENST00000595961 WIZO95785 1651 aa21.81■■□□□ 1.08
TIMM50-206ENST00000595961 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
TIMM50-206ENST00000595961 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
TIMM50-206ENST00000595961 BICRAQ9NZM4 1560 aa21.62■■□□□ 1.05
TIMM50-206ENST00000595961 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
TIMM50-206ENST00000595961 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
TIMM50-206ENST00000595961 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
TIMM50-206ENST00000595961 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
TIMM50-206ENST00000595961 CCDC88BA6NC98 1476 aa21.33■■□□□ 1.01
TIMM50-206ENST00000595961 SMARCA2P51531 1590 aa21.32■■□□□ 1
TIMM50-206ENST00000595961 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
TIMM50-206ENST00000595961 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
TIMM50-206ENST00000595961 HRCP23327 699 aa21.25■□□□□ 0.99
TIMM50-206ENST00000595961 PEG3Q9GZU2 1588 aa21.2■□□□□ 0.98
TIMM50-206ENST00000595961 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
TIMM50-206ENST00000595961 EHMT2Q96KQ7 1210 aa21.15■□□□□ 0.98
TIMM50-206ENST00000595961 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
TIMM50-206ENST00000595961 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
TIMM50-206ENST00000595961 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
TIMM50-206ENST00000595961 PPARGC1BQ86YN6 1023 aaKnown RBP20.86■□□□□ 0.93
TIMM50-206ENST00000595961 SOGA1O94964 1423 aa20.84■□□□□ 0.93
TIMM50-206ENST00000595961 WRNQ14191 1432 aaPredicted RBP eCLIP20.83■□□□□ 0.93
TIMM50-206ENST00000595961 TRIM26Q12899 539 aaPredicted RBP20.8■□□□□ 0.92
TIMM50-206ENST00000595961 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
TIMM50-206ENST00000595961 RUSC2Q8N2Y8 1516 aa20.77■□□□□ 0.92
TIMM50-206ENST00000595961 HMGXB3Q12766 1538 aa20.77■□□□□ 0.92
TIMM50-206ENST00000595961 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
TIMM50-206ENST00000595961 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
TIMM50-206ENST00000595961 EEA1Q15075 1411 aa20.67■□□□□ 0.9
TIMM50-206ENST00000595961 UBTFP17480 764 aaKnown RBP20.56■□□□□ 0.88
TIMM50-206ENST00000595961 CEP162Q5TB80 1403 aa20.55■□□□□ 0.88
TIMM50-206ENST00000595961 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
TIMM50-206ENST00000595961 TNIKQ9UKE5 1360 aa20.54■□□□□ 0.88
TIMM50-206ENST00000595961 CC2D2AQ9P2K1 1620 aa20.52■□□□□ 0.88
TIMM50-206ENST00000595961 GOLGA3Q08378 1498 aa20.52■□□□□ 0.88
TIMM50-206ENST00000595961 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
TIMM50-206ENST00000595961 CFTRP13569 1480 aa20.5■□□□□ 0.87
TIMM50-206ENST00000595961 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
TIMM50-206ENST00000595961 KIF21BO75037 1637 aa20.44■□□□□ 0.86
TIMM50-206ENST00000595961 CUX1P39880 1505 aa20.44■□□□□ 0.86
TIMM50-206ENST00000595961 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
TIMM50-206ENST00000595961 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
TIMM50-206ENST00000595961 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
TIMM50-206ENST00000595961 CADPSQ9ULU8 1353 aa20.35■□□□□ 0.85
TIMM50-206ENST00000595961 PELP1Q8IZL8 1130 aaKnown RBP20.29■□□□□ 0.84
TIMM50-206ENST00000595961 RANGAP1P46060 587 aaPredicted RBP20.27■□□□□ 0.83
TIMM50-206ENST00000595961 CLIP1P30622 1438 aa20.26■□□□□ 0.83
TIMM50-206ENST00000595961 KIF27Q86VH2 1401 aa20.22■□□□□ 0.83
TIMM50-206ENST00000595961 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
TIMM50-206ENST00000595961 ERICH3Q5RHP9 1530 aa20.18■□□□□ 0.82
TIMM50-206ENST00000595961 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
TIMM50-206ENST00000595961 NESP48681 1621 aa20.16■□□□□ 0.82
TIMM50-206ENST00000595961 FGD5Q6ZNL6 1462 aa20.14■□□□□ 0.81
TIMM50-206ENST00000595961 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
TIMM50-206ENST00000595961 CUX2O14529 1486 aa20.12■□□□□ 0.81
TIMM50-206ENST00000595961 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
TIMM50-206ENST00000595961 SCAF1Q9H7N4 1312 aaKnown RBP20.1■□□□□ 0.81
TIMM50-206ENST00000595961 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
TIMM50-206ENST00000595961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.06■□□□□ 0.8
TIMM50-206ENST00000595961 IGF1RP08069 1367 aa20.03■□□□□ 0.8
TIMM50-206ENST00000595961 DNMBPQ6XZF7 1577 aa20.02■□□□□ 0.8
TIMM50-206ENST00000595961 APLP2Q06481 763 aa20■□□□□ 0.79
TIMM50-206ENST00000595961 TOPBP1Q92547 1522 aa20■□□□□ 0.79
TIMM50-206ENST00000595961 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
TIMM50-206ENST00000595961 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
TIMM50-206ENST00000595961 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
TIMM50-206ENST00000595961 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
TIMM50-206ENST00000595961 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
TIMM50-206ENST00000595961 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.78
TIMM50-206ENST00000595961 URB2Q14146 1524 aaKnown RBP19.9■□□□□ 0.78
TIMM50-206ENST00000595961 ARHGAP35Q9NRY4 1499 aa19.89■□□□□ 0.78
TIMM50-206ENST00000595961 ABCA10Q8WWZ4 1543 aa19.89■□□□□ 0.77
TIMM50-206ENST00000595961 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
TIMM50-206ENST00000595961 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
TIMM50-206ENST00000595961 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
TIMM50-206ENST00000595961 KANK4Q5T7N3 995 aaPredicted RBP19.82■□□□□ 0.76
TIMM50-206ENST00000595961 WDR97A6NE52 1622 aa19.79■□□□□ 0.76
TIMM50-206ENST00000595961 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
TIMM50-206ENST00000595961 CUL7Q14999 1698 aa19.74■□□□□ 0.75
TIMM50-206ENST00000595961 P3H3Q8IVL6 736 aa19.72■□□□□ 0.75
TIMM50-206ENST00000595961 ABCA5Q8WWZ7 1642 aa19.7■□□□□ 0.74
TIMM50-206ENST00000595961 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
TIMM50-206ENST00000595961 CTTNBP2Q8WZ74 1663 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms