RNA–Protein interactions for RNA: ENST00000595951.1

GTPBP3-210, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-210ENST00000595951 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
GTPBP3-210ENST00000595951 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
GTPBP3-210ENST00000595951 ABCC9O60706 1549 aa26.09■■□□□ 1.77
GTPBP3-210ENST00000595951 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
GTPBP3-210ENST00000595951 NACADO15069 1562 aa24.94■■□□□ 1.58
GTPBP3-210ENST00000595951 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
GTPBP3-210ENST00000595951 MYO15BQ96JP2 1530 aa24.72■■□□□ 1.55
GTPBP3-210ENST00000595951 ZCCHC6Q5VYS8 1495 aaKnown RBP24.66■■□□□ 1.54
GTPBP3-210ENST00000595951 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
GTPBP3-210ENST00000595951 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
GTPBP3-210ENST00000595951 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.49
GTPBP3-210ENST00000595951 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
GTPBP3-210ENST00000595951 DNAJC5BQ9UF47 199 aa24.15■■□□□ 1.46
GTPBP3-210ENST00000595951 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
GTPBP3-210ENST00000595951 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
GTPBP3-210ENST00000595951 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
GTPBP3-210ENST00000595951 CC2D2AQ9P2K1 1620 aa23.61■■□□□ 1.37
GTPBP3-210ENST00000595951 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
GTPBP3-210ENST00000595951 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
GTPBP3-210ENST00000595951 NCAPD3P42695 1498 aa23■■□□□ 1.27
GTPBP3-210ENST00000595951 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
GTPBP3-210ENST00000595951 ATAD2BQ9ULI0 1458 aa22.99■■□□□ 1.27
GTPBP3-210ENST00000595951 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
GTPBP3-210ENST00000595951 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
GTPBP3-210ENST00000595951 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
GTPBP3-210ENST00000595951 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
GTPBP3-210ENST00000595951 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
GTPBP3-210ENST00000595951 WIZO95785 1651 aa22.62■■□□□ 1.21
GTPBP3-210ENST00000595951 NESP48681 1621 aa22.52■■□□□ 1.2
GTPBP3-210ENST00000595951 RSF1Q96T23 1441 aaPredicted RBP22.51■■□□□ 1.19
GTPBP3-210ENST00000595951 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
GTPBP3-210ENST00000595951 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
GTPBP3-210ENST00000595951 CUX2O14529 1486 aa22.35■■□□□ 1.17
GTPBP3-210ENST00000595951 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
GTPBP3-210ENST00000595951 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
GTPBP3-210ENST00000595951 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
GTPBP3-210ENST00000595951 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
GTPBP3-210ENST00000595951 THOC2Q8NI27 1593 aaKnown RBP22.24■■□□□ 1.15
GTPBP3-210ENST00000595951 CFTRP13569 1480 aa22.15■■□□□ 1.14
GTPBP3-210ENST00000595951 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
GTPBP3-210ENST00000595951 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.12
GTPBP3-210ENST00000595951 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
GTPBP3-210ENST00000595951 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
GTPBP3-210ENST00000595951 WDR62O43379 1518 aa22.01■■□□□ 1.11
GTPBP3-210ENST00000595951 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
GTPBP3-210ENST00000595951 DNAJC5Q9H3Z4 198 aa21.98■■□□□ 1.11
GTPBP3-210ENST00000595951 URB2Q14146 1524 aaKnown RBP21.87■■□□□ 1.09
GTPBP3-210ENST00000595951 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
GTPBP3-210ENST00000595951 TOPBP1Q92547 1522 aa21.7■■□□□ 1.07
GTPBP3-210ENST00000595951 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
GTPBP3-210ENST00000595951 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
GTPBP3-210ENST00000595951 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
GTPBP3-210ENST00000595951 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
GTPBP3-210ENST00000595951 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
GTPBP3-210ENST00000595951 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
GTPBP3-210ENST00000595951 CUX1P39880 1505 aa21.46■■□□□ 1.03
GTPBP3-210ENST00000595951 EIF4G3O43432 1585 aaKnown RBP21.44■■□□□ 1.02
GTPBP3-210ENST00000595951 FGD5Q6ZNL6 1462 aa21.41■■□□□ 1.02
GTPBP3-210ENST00000595951 RAD54L2Q9Y4B4 1467 aa21.41■■□□□ 1.02
GTPBP3-210ENST00000595951 SOGA1O94964 1423 aa21.4■■□□□ 1.02
GTPBP3-210ENST00000595951 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
GTPBP3-210ENST00000595951 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.018e-8■■■■■ 39.5
GTPBP3-210ENST00000595951 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
GTPBP3-210ENST00000595951 WDR97A6NE52 1622 aa21.3■■□□□ 1
GTPBP3-210ENST00000595951 CHD1O14646 1710 aa21.24■□□□□ 0.99
GTPBP3-210ENST00000595951 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
GTPBP3-210ENST00000595951 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
GTPBP3-210ENST00000595951 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
GTPBP3-210ENST00000595951 ABCA10Q8WWZ4 1543 aa21.2■□□□□ 0.98
GTPBP3-210ENST00000595951 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
GTPBP3-210ENST00000595951 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
GTPBP3-210ENST00000595951 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
GTPBP3-210ENST00000595951 FBLN2P98095 1184 aa21.17■□□□□ 0.98
GTPBP3-210ENST00000595951 GAPVD1Q14C86 1478 aa21.16■□□□□ 0.98
GTPBP3-210ENST00000595951 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
GTPBP3-210ENST00000595951 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
GTPBP3-210ENST00000595951 TRIM41Q8WV44 630 aa21.15■□□□□ 0.98
GTPBP3-210ENST00000595951 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.97
GTPBP3-210ENST00000595951 RIMBP3CA6NJZ7 1639 aa21.08■□□□□ 0.97
GTPBP3-210ENST00000595951 RIMBP3BA6NNM3 1639 aa21.08■□□□□ 0.97
GTPBP3-210ENST00000595951 RIMBP3Q9UFD9 1639 aa21.08■□□□□ 0.97
GTPBP3-210ENST00000595951 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.97
GTPBP3-210ENST00000595951 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
GTPBP3-210ENST00000595951 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
GTPBP3-210ENST00000595951 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
GTPBP3-210ENST00000595951 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
GTPBP3-210ENST00000595951 ERICH3Q5RHP9 1530 aa20.94■□□□□ 0.94
GTPBP3-210ENST00000595951 FHAD1B1AJZ9 1412 aa20.91■□□□□ 0.94
GTPBP3-210ENST00000595951 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
GTPBP3-210ENST00000595951 ARAP1Q96P48 1450 aa20.86■□□□□ 0.93
GTPBP3-210ENST00000595951 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
GTPBP3-210ENST00000595951 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
GTPBP3-210ENST00000595951 NUP160Q12769 1436 aa20.82■□□□□ 0.92
GTPBP3-210ENST00000595951 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
GTPBP3-210ENST00000595951 IGF1RP08069 1367 aa20.75■□□□□ 0.91
GTPBP3-210ENST00000595951 CUL7Q14999 1698 aa20.72■□□□□ 0.91
GTPBP3-210ENST00000595951 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
GTPBP3-210ENST00000595951 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
GTPBP3-210ENST00000595951 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.9
GTPBP3-210ENST00000595951 CARMIL1Q5VZK9 1371 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms