RNA–Protein interactions for RNA: ENST00000595900.1

SIN3B-207, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 4

Gene SIN3B, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-207ENST00000595900 NISCHQ9Y2I1 1504 aa27.07■■□□□ 1.92
SIN3B-207ENST00000595900 ABCC9O60706 1549 aa25.27■■□□□ 1.64
SIN3B-207ENST00000595900 CCDC180Q9P1Z9 1646 aa24.51■■□□□ 1.51
SIN3B-207ENST00000595900 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
SIN3B-207ENST00000595900 RB1CC1Q8TDY2 1594 aa23.72■■□□□ 1.39
SIN3B-207ENST00000595900 PABPN1Q86U42 306 aaKnown RBP eCLIP23.45■■□□□ 1.34
SIN3B-207ENST00000595900 NACADO15069 1562 aa23.4■■□□□ 1.34
SIN3B-207ENST00000595900 DCAF8L2P0C7V8 631 aa23.18■■□□□ 1.3
SIN3B-207ENST00000595900 UNC13AQ9UPW8 1703 aa23.06■■□□□ 1.28
SIN3B-207ENST00000595900 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
SIN3B-207ENST00000595900 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.25
SIN3B-207ENST00000595900 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
SIN3B-207ENST00000595900 CECR2Q9BXF3 1484 aa22.85■■□□□ 1.25
SIN3B-207ENST00000595900 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
SIN3B-207ENST00000595900 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
SIN3B-207ENST00000595900 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
SIN3B-207ENST00000595900 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
SIN3B-207ENST00000595900 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
SIN3B-207ENST00000595900 ZCCHC6Q5VYS8 1495 aaKnown RBP22.29■■□□□ 1.16
SIN3B-207ENST00000595900 CUX2O14529 1486 aa22.09■■□□□ 1.13
SIN3B-207ENST00000595900 ERCC6Q03468 1493 aa21.88■■□□□ 1.09
SIN3B-207ENST00000595900 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
SIN3B-207ENST00000595900 TRIM41Q8WV44 630 aa21.57■■□□□ 1.04
SIN3B-207ENST00000595900 NESP48681 1621 aa21.5■■□□□ 1.03
SIN3B-207ENST00000595900 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
SIN3B-207ENST00000595900 HMGXB3Q12766 1538 aa21.39■■□□□ 1.02
SIN3B-207ENST00000595900 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
SIN3B-207ENST00000595900 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
SIN3B-207ENST00000595900 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
SIN3B-207ENST00000595900 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
SIN3B-207ENST00000595900 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
SIN3B-207ENST00000595900 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
SIN3B-207ENST00000595900 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
SIN3B-207ENST00000595900 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
SIN3B-207ENST00000595900 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
SIN3B-207ENST00000595900 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
SIN3B-207ENST00000595900 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
SIN3B-207ENST00000595900 WDR62O43379 1518 aa20.98■□□□□ 0.95
SIN3B-207ENST00000595900 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
SIN3B-207ENST00000595900 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
SIN3B-207ENST00000595900 CEP164Q9UPV0 1460 aa20.79■□□□□ 0.92
SIN3B-207ENST00000595900 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
SIN3B-207ENST00000595900 RIMBP3CA6NJZ7 1639 aa20.7■□□□□ 0.9
SIN3B-207ENST00000595900 RIMBP3BA6NNM3 1639 aa20.7■□□□□ 0.9
SIN3B-207ENST00000595900 RIMBP3Q9UFD9 1639 aa20.7■□□□□ 0.9
SIN3B-207ENST00000595900 ARHGEF11O15085 1522 aa20.61■□□□□ 0.89
SIN3B-207ENST00000595900 CFTRP13569 1480 aa20.58■□□□□ 0.89
SIN3B-207ENST00000595900 URB2Q14146 1524 aaKnown RBP20.57■□□□□ 0.88
SIN3B-207ENST00000595900 CYB5RLQ6IPT4 315 aa20.54■□□□□ 0.88
SIN3B-207ENST00000595900 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
SIN3B-207ENST00000595900 WIZO95785 1651 aa20.51■□□□□ 0.87
SIN3B-207ENST00000595900 ZNF608Q9ULD9 1512 aaPredicted RBP20.44■□□□□ 0.86
SIN3B-207ENST00000595900 AEBP2Q6ZN18 517 aaPredicted RBP20.44■□□□□ 0.86
SIN3B-207ENST00000595900 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
SIN3B-207ENST00000595900 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
SIN3B-207ENST00000595900 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.84
SIN3B-207ENST00000595900 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
SIN3B-207ENST00000595900 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
SIN3B-207ENST00000595900 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
SIN3B-207ENST00000595900 FBLN2P98095 1184 aa20.2■□□□□ 0.82
SIN3B-207ENST00000595900 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.824e-6■■■□□ 16.1
SIN3B-207ENST00000595900 CHD1O14646 1710 aa20.16■□□□□ 0.82
SIN3B-207ENST00000595900 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
SIN3B-207ENST00000595900 PRDM2Q13029 1718 aa20.14■□□□□ 0.81
SIN3B-207ENST00000595900 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
SIN3B-207ENST00000595900 TARBP1Q13395 1621 aaKnown RBP20.06■□□□□ 0.8
SIN3B-207ENST00000595900 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
SIN3B-207ENST00000595900 CLASP1Q7Z460 1538 aa20■□□□□ 0.79
SIN3B-207ENST00000595900 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
SIN3B-207ENST00000595900 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.79
SIN3B-207ENST00000595900 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
SIN3B-207ENST00000595900 SNAPC4Q5SXM2 1469 aa19.94■□□□□ 0.78
SIN3B-207ENST00000595900 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
SIN3B-207ENST00000595900 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
SIN3B-207ENST00000595900 SOGA1O94964 1423 aa19.9■□□□□ 0.78
SIN3B-207ENST00000595900 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
SIN3B-207ENST00000595900 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
SIN3B-207ENST00000595900 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
SIN3B-207ENST00000595900 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
SIN3B-207ENST00000595900 GRIN2BQ13224 1484 aa19.8■□□□□ 0.76
SIN3B-207ENST00000595900 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
SIN3B-207ENST00000595900 ILDR1Q86SU0 546 aaPredicted RBP19.64■□□□□ 0.73
SIN3B-207ENST00000595900 ERCC6L2Q5T890 1561 aa19.63■□□□□ 0.73
SIN3B-207ENST00000595900 CUX1P39880 1505 aa19.62■□□□□ 0.73
SIN3B-207ENST00000595900 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
SIN3B-207ENST00000595900 CEP170Q5SW79 1584 aa19.54■□□□□ 0.72
SIN3B-207ENST00000595900 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
SIN3B-207ENST00000595900 KDM4FA0A1W2PPD8 638 aa19.53■□□□□ 0.72
SIN3B-207ENST00000595900 NUP160Q12769 1436 aa19.51■□□□□ 0.71
SIN3B-207ENST00000595900 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
SIN3B-207ENST00000595900 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
SIN3B-207ENST00000595900 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
SIN3B-207ENST00000595900 FAM69CQ0P6D2 419 aa19.48■□□□□ 0.71
SIN3B-207ENST00000595900 SHROOM2Q13796 1616 aa19.44■□□□□ 0.7
SIN3B-207ENST00000595900 ABCC10Q5T3U5 1492 aa19.44■□□□□ 0.7
SIN3B-207ENST00000595900 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
SIN3B-207ENST00000595900 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
SIN3B-207ENST00000595900 FHAD1B1AJZ9 1412 aa19.37■□□□□ 0.69
SIN3B-207ENST00000595900 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
SIN3B-207ENST00000595900 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms