RNA–Protein interactions for RNA: ENST00000595817.5

FARP1-215, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 778 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-215ENST00000595817 NISCHQ9Y2I1 1504 aa26.89■■□□□ 1.89
FARP1-215ENST00000595817 CCDC180Q9P1Z9 1646 aa24.01■■□□□ 1.43
FARP1-215ENST00000595817 ABCC9O60706 1549 aa23.94■■□□□ 1.42
FARP1-215ENST00000595817 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
FARP1-215ENST00000595817 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
FARP1-215ENST00000595817 NACADO15069 1562 aa22.69■■□□□ 1.22
FARP1-215ENST00000595817 MYO15BQ96JP2 1530 aa22.4■■□□□ 1.18
FARP1-215ENST00000595817 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
FARP1-215ENST00000595817 ZCCHC6Q5VYS8 1495 aaKnown RBP22.32■■□□□ 1.16
FARP1-215ENST00000595817 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
FARP1-215ENST00000595817 UNC13AQ9UPW8 1703 aa22.21■■□□□ 1.15
FARP1-215ENST00000595817 DCAF1Q9Y4B6 1507 aa22.18■■□□□ 1.14
FARP1-215ENST00000595817 BICRAQ9NZM4 1560 aa22.08■■□□□ 1.12
FARP1-215ENST00000595817 SCRIBQ14160 1630 aa21.97■■□□□ 1.11
FARP1-215ENST00000595817 SHROOM4Q9ULL8 1493 aa21.84■■□□□ 1.09
FARP1-215ENST00000595817 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
FARP1-215ENST00000595817 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
FARP1-215ENST00000595817 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
FARP1-215ENST00000595817 NCAPD3P42695 1498 aa20.94■□□□□ 0.94
FARP1-215ENST00000595817 SMARCA4P51532 1647 aa20.93■□□□□ 0.94
FARP1-215ENST00000595817 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
FARP1-215ENST00000595817 SMARCA2P51531 1590 aa20.89■□□□□ 0.93
FARP1-215ENST00000595817 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.93
FARP1-215ENST00000595817 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
FARP1-215ENST00000595817 BAZ1BQ9UIG0 1483 aaKnown RBP20.78■□□□□ 0.92
FARP1-215ENST00000595817 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
FARP1-215ENST00000595817 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
FARP1-215ENST00000595817 PEG3Q9GZU2 1588 aa20.68■□□□□ 0.9
FARP1-215ENST00000595817 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
FARP1-215ENST00000595817 NESP48681 1621 aa20.58■□□□□ 0.89
FARP1-215ENST00000595817 CUX2O14529 1486 aa20.52■□□□□ 0.88
FARP1-215ENST00000595817 WIZO95785 1651 aa20.48■□□□□ 0.87
FARP1-215ENST00000595817 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
FARP1-215ENST00000595817 PDS5BQ9NTI5 1447 aa20.38■□□□□ 0.85
FARP1-215ENST00000595817 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
FARP1-215ENST00000595817 CADPSQ9ULU8 1353 aa20.35■□□□□ 0.85
FARP1-215ENST00000595817 DNAJC5Q9H3Z4 198 aa20.31■□□□□ 0.84
FARP1-215ENST00000595817 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
FARP1-215ENST00000595817 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
FARP1-215ENST00000595817 TOP2AP11388 1531 aaKnown RBP20.25■□□□□ 0.83
FARP1-215ENST00000595817 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
FARP1-215ENST00000595817 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
FARP1-215ENST00000595817 CFTRP13569 1480 aa20.13■□□□□ 0.81
FARP1-215ENST00000595817 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
FARP1-215ENST00000595817 WDR62O43379 1518 aa20.07■□□□□ 0.8
FARP1-215ENST00000595817 CCDC88BA6NC98 1476 aa20.02■□□□□ 0.8
FARP1-215ENST00000595817 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
FARP1-215ENST00000595817 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
FARP1-215ENST00000595817 TOPBP1Q92547 1522 aa19.75■□□□□ 0.75
FARP1-215ENST00000595817 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
FARP1-215ENST00000595817 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
FARP1-215ENST00000595817 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
FARP1-215ENST00000595817 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
FARP1-215ENST00000595817 OSCARQ8IYS5 282 aa19.68■□□□□ 0.74
FARP1-215ENST00000595817 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
FARP1-215ENST00000595817 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
FARP1-215ENST00000595817 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
FARP1-215ENST00000595817 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
FARP1-215ENST00000595817 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
FARP1-215ENST00000595817 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.721e-8■■□□□ 13
FARP1-215ENST00000595817 SOGA1O94964 1423 aa19.51■□□□□ 0.71
FARP1-215ENST00000595817 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
FARP1-215ENST00000595817 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
FARP1-215ENST00000595817 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
FARP1-215ENST00000595817 FBLN2P98095 1184 aa19.47■□□□□ 0.71
FARP1-215ENST00000595817 CUX1P39880 1505 aa19.46■□□□□ 0.71
FARP1-215ENST00000595817 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
FARP1-215ENST00000595817 CHD1O14646 1710 aa19.35■□□□□ 0.69
FARP1-215ENST00000595817 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
FARP1-215ENST00000595817 WDR97A6NE52 1622 aa19.34■□□□□ 0.69
FARP1-215ENST00000595817 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
FARP1-215ENST00000595817 RIMBP3CA6NJZ7 1639 aa19.33■□□□□ 0.68
FARP1-215ENST00000595817 RIMBP3BA6NNM3 1639 aa19.33■□□□□ 0.68
FARP1-215ENST00000595817 RIMBP3Q9UFD9 1639 aa19.33■□□□□ 0.68
FARP1-215ENST00000595817 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
FARP1-215ENST00000595817 ARHGEF11O15085 1522 aa19.3■□□□□ 0.68
FARP1-215ENST00000595817 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
FARP1-215ENST00000595817 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.67
FARP1-215ENST00000595817 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
FARP1-215ENST00000595817 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
FARP1-215ENST00000595817 CYB5RLQ6IPT4 315 aa19.23■□□□□ 0.67
FARP1-215ENST00000595817 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
FARP1-215ENST00000595817 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
FARP1-215ENST00000595817 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
FARP1-215ENST00000595817 PBRM1Q86U86 1689 aa19.19■□□□□ 0.66
FARP1-215ENST00000595817 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
FARP1-215ENST00000595817 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
FARP1-215ENST00000595817 CLASP1Q7Z460 1538 aa19.12■□□□□ 0.65
FARP1-215ENST00000595817 ARAP1Q96P48 1450 aa19.12■□□□□ 0.65
FARP1-215ENST00000595817 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
FARP1-215ENST00000595817 ADAMTS12P58397 1594 aa19.04■□□□□ 0.64
FARP1-215ENST00000595817 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
FARP1-215ENST00000595817 TRHP20396 242 aaPredicted RBP19.02■□□□□ 0.64
FARP1-215ENST00000595817 ERICH3Q5RHP9 1530 aa19.01■□□□□ 0.63
FARP1-215ENST00000595817 NUP160Q12769 1436 aa18.95■□□□□ 0.62
FARP1-215ENST00000595817 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
FARP1-215ENST00000595817 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
FARP1-215ENST00000595817 ERCC6L2Q5T890 1561 aa18.85■□□□□ 0.61
FARP1-215ENST00000595817 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
FARP1-215ENST00000595817 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms