RNA–Protein interactions for RNA: ENST00000595720.5

TMEM143-205, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 1,094 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-205ENST00000595720 NISCHQ9Y2I1 1504 aa43.58■■■■■ 4.57
TMEM143-205ENST00000595720 CCDC180Q9P1Z9 1646 aa39.22■■■■□ 3.87
TMEM143-205ENST00000595720 ABCC9O60706 1549 aa38.96■■■■□ 3.83
TMEM143-205ENST00000595720 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
TMEM143-205ENST00000595720 NACADO15069 1562 aa36.99■■■■□ 3.51
TMEM143-205ENST00000595720 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
TMEM143-205ENST00000595720 DNAJC5BQ9UF47 199 aa36.45■■■■□ 3.43
TMEM143-205ENST00000595720 UNC13AQ9UPW8 1703 aa36.41■■■■□ 3.42
TMEM143-205ENST00000595720 DCAF8L2P0C7V8 631 aa36.37■■■■□ 3.41
TMEM143-205ENST00000595720 ZCCHC6Q5VYS8 1495 aaKnown RBP36.19■■■■□ 3.38
TMEM143-205ENST00000595720 BICRAQ9NZM4 1560 aa36.17■■■■□ 3.38
TMEM143-205ENST00000595720 PABPN1Q86U42 306 aaKnown RBP eCLIP36.15■■■■□ 3.38
TMEM143-205ENST00000595720 DCAF1Q9Y4B6 1507 aa36.11■■■■□ 3.37
TMEM143-205ENST00000595720 SHROOM4Q9ULL8 1493 aa35.8■■■■□ 3.32
TMEM143-205ENST00000595720 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
TMEM143-205ENST00000595720 CC2D2AQ9P2K1 1620 aa35.28■■■■□ 3.24
TMEM143-205ENST00000595720 EIF4G1Q04637 1599 aaKnown RBP35.25■■■■□ 3.23
TMEM143-205ENST00000595720 CECR2Q9BXF3 1484 aa35.13■■■■□ 3.21
TMEM143-205ENST00000595720 NCAPD3P42695 1498 aa34.12■■■■□ 3.05
TMEM143-205ENST00000595720 SMARCA4P51532 1647 aa34.02■■■■□ 3.04
TMEM143-205ENST00000595720 ATAD2BQ9ULI0 1458 aa34■■■■□ 3.03
TMEM143-205ENST00000595720 HMGXB3Q12766 1538 aa33.95■■■■□ 3.03
TMEM143-205ENST00000595720 SMARCA2P51531 1590 aa33.94■■■■□ 3.02
TMEM143-205ENST00000595720 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
TMEM143-205ENST00000595720 PEG3Q9GZU2 1588 aa33.78■■■■□ 3
TMEM143-205ENST00000595720 CUX2O14529 1486 aa33.69■■■□□ 2.98
TMEM143-205ENST00000595720 BAZ1BQ9UIG0 1483 aaKnown RBP33.65■■■□□ 2.98
TMEM143-205ENST00000595720 ERCC6Q03468 1493 aa33.63■■■□□ 2.97
TMEM143-205ENST00000595720 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
TMEM143-205ENST00000595720 NESP48681 1621 aa33.5■■■□□ 2.95
TMEM143-205ENST00000595720 DNAJC5Q9H3Z4 198 aa33.47■■■□□ 2.95
TMEM143-205ENST00000595720 LAMC3Q9Y6N6 1575 aa33.38■■■□□ 2.93
TMEM143-205ENST00000595720 THOC2Q8NI27 1593 aaKnown RBP33.3■■■□□ 2.92
TMEM143-205ENST00000595720 KIF21AQ7Z4S6 1674 aa33.15■■■□□ 2.9
TMEM143-205ENST00000595720 WIZO95785 1651 aa33.13■■■□□ 2.89
TMEM143-205ENST00000595720 PDS5BQ9NTI5 1447 aa33.08■■■□□ 2.89
TMEM143-205ENST00000595720 CADPSQ9ULU8 1353 aa33.01■■■□□ 2.88
TMEM143-205ENST00000595720 MRC2Q9UBG0 1479 aa32.86■■■□□ 2.85
TMEM143-205ENST00000595720 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
TMEM143-205ENST00000595720 WDR62O43379 1518 aa32.84■■■□□ 2.85
TMEM143-205ENST00000595720 TOP2AP11388 1531 aaKnown RBP32.8■■■□□ 2.84
TMEM143-205ENST00000595720 CFTRP13569 1480 aa32.72■■■□□ 2.83
TMEM143-205ENST00000595720 CEP164Q9UPV0 1460 aa32.72■■■□□ 2.83
TMEM143-205ENST00000595720 FANCD2Q9BXW9 1451 aa32.67■■■□□ 2.82
TMEM143-205ENST00000595720 PRDM2Q13029 1718 aa32.48■■■□□ 2.79
TMEM143-205ENST00000595720 URB2Q14146 1524 aaKnown RBP32.43■■■□□ 2.78
TMEM143-205ENST00000595720 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
TMEM143-205ENST00000595720 TOPBP1Q92547 1522 aa32.07■■■□□ 2.72
TMEM143-205ENST00000595720 IFT140Q96RY7 1462 aa32.07■■■□□ 2.72
TMEM143-205ENST00000595720 ABCC8Q09428 1581 aa32■■■□□ 2.71
TMEM143-205ENST00000595720 DNMBPQ6XZF7 1577 aa32■■■□□ 2.71
TMEM143-205ENST00000595720 ZNF608Q9ULD9 1512 aaPredicted RBP31.98■■■□□ 2.71
TMEM143-205ENST00000595720 OSCARQ8IYS5 282 aa31.94■■■□□ 2.7
TMEM143-205ENST00000595720 EIF4G3O43432 1585 aaKnown RBP31.9■■■□□ 2.7
TMEM143-205ENST00000595720 TRIM41Q8WV44 630 aa31.87■■■□□ 2.69
TMEM143-205ENST00000595720 TARBP1Q13395 1621 aaKnown RBP31.85■■■□□ 2.69
TMEM143-205ENST00000595720 POLA1P09884 1462 aaPredicted RBP31.76■■■□□ 2.67
TMEM143-205ENST00000595720 RIMBP3CA6NJZ7 1639 aa31.7■■■□□ 2.66
TMEM143-205ENST00000595720 RIMBP3BA6NNM3 1639 aa31.7■■■□□ 2.66
TMEM143-205ENST00000595720 RIMBP3Q9UFD9 1639 aa31.7■■■□□ 2.66
TMEM143-205ENST00000595720 AQRO60306 1485 aaKnown RBP eCLIP31.64■■■□□ 2.664e-7■■■■■ 29.2
TMEM143-205ENST00000595720 CHD1O14646 1710 aa31.61■■■□□ 2.65
TMEM143-205ENST00000595720 ARHGEF11O15085 1522 aa31.61■■■□□ 2.65
TMEM143-205ENST00000595720 WDR97A6NE52 1622 aa31.6■■■□□ 2.65
TMEM143-205ENST00000595720 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
TMEM143-205ENST00000595720 FGD5Q6ZNL6 1462 aa31.54■■■□□ 2.64
TMEM143-205ENST00000595720 CUX1P39880 1505 aa31.54■■■□□ 2.64
TMEM143-205ENST00000595720 SOGA1O94964 1423 aa31.5■■■□□ 2.63
TMEM143-205ENST00000595720 TDRD9Q8NDG6 1382 aaKnown RBP31.42■■■□□ 2.62
TMEM143-205ENST00000595720 SNAPC4Q5SXM2 1469 aa31.39■■■□□ 2.62
TMEM143-205ENST00000595720 MAGI1Q96QZ7 1491 aaPredicted RBP31.36■■■□□ 2.61
TMEM143-205ENST00000595720 CLASP1Q7Z460 1538 aa31.32■■■□□ 2.6
TMEM143-205ENST00000595720 GRIN2BQ13224 1484 aa31.31■■■□□ 2.6
TMEM143-205ENST00000595720 ARAP1Q96P48 1450 aa31.3■■■□□ 2.6
TMEM143-205ENST00000595720 FBLN2P98095 1184 aa31.25■■■□□ 2.59
TMEM143-205ENST00000595720 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
TMEM143-205ENST00000595720 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
TMEM143-205ENST00000595720 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
TMEM143-205ENST00000595720 SYNJ2O15056 1496 aa31.23■■■□□ 2.59
TMEM143-205ENST00000595720 ABCA10Q8WWZ4 1543 aa31.23■■■□□ 2.59
TMEM143-205ENST00000595720 GAPVD1Q14C86 1478 aa31.18■■■□□ 2.58
TMEM143-205ENST00000595720 SUPT5HO00267 1087 aaKnown RBP31.15■■■□□ 2.58
TMEM143-205ENST00000595720 CYB5RLQ6IPT4 315 aa31.14■■■□□ 2.58
TMEM143-205ENST00000595720 BIVM-ERCC5R4GMW8 1640 aa31.11■■■□□ 2.57
TMEM143-205ENST00000595720 CHMP7Q8WUX9 453 aaPredicted RBP31.09■■■□□ 2.57
TMEM143-205ENST00000595720 TOP2BQ02880 1626 aa31.08■■■□□ 2.57
TMEM143-205ENST00000595720 WRNQ14191 1432 aaPredicted RBP eCLIP31.04■■■□□ 2.56
TMEM143-205ENST00000595720 ADAMTS12P58397 1594 aa30.99■■■□□ 2.55
TMEM143-205ENST00000595720 GRIN2AQ12879 1464 aa30.94■■■□□ 2.54
TMEM143-205ENST00000595720 NUP160Q12769 1436 aa30.86■■■□□ 2.53
TMEM143-205ENST00000595720 CEP170Q5SW79 1584 aa30.85■■■□□ 2.53
TMEM143-205ENST00000595720 ERICH3Q5RHP9 1530 aa30.85■■■□□ 2.53
TMEM143-205ENST00000595720 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
TMEM143-205ENST00000595720 SHROOM2Q13796 1616 aa30.77■■■□□ 2.52
TMEM143-205ENST00000595720 ERCC6L2Q5T890 1561 aa30.75■■■□□ 2.51
TMEM143-205ENST00000595720 TRHP20396 242 aaPredicted RBP30.73■■■□□ 2.51
TMEM143-205ENST00000595720 RUSC2Q8N2Y8 1516 aa30.57■■■□□ 2.48
TMEM143-205ENST00000595720 PRG4Q92954 1404 aaPredicted RBP30.45■■■□□ 2.46
TMEM143-205ENST00000595720 CUL7Q14999 1698 aa30.42■■■□□ 2.46
TMEM143-205ENST00000595720 KIF27Q86VH2 1401 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 269.5 ms