RNA–Protein interactions for RNA: ENST00000595690.1

SPTBN4-208, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 763 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-208ENST00000595690 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
SPTBN4-208ENST00000595690 ABCC9O60706 1549 aa25.75■■□□□ 1.71
SPTBN4-208ENST00000595690 CCDC180Q9P1Z9 1646 aa25.35■■□□□ 1.65
SPTBN4-208ENST00000595690 DNAJC5BQ9UF47 199 aa24.6■■□□□ 1.53
SPTBN4-208ENST00000595690 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
SPTBN4-208ENST00000595690 NACADO15069 1562 aa24.07■■□□□ 1.44
SPTBN4-208ENST00000595690 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
SPTBN4-208ENST00000595690 UNC13AQ9UPW8 1703 aa23.79■■□□□ 1.4
SPTBN4-208ENST00000595690 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
SPTBN4-208ENST00000595690 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
SPTBN4-208ENST00000595690 MYO15BQ96JP2 1530 aa23.65■■□□□ 1.38
SPTBN4-208ENST00000595690 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
SPTBN4-208ENST00000595690 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
SPTBN4-208ENST00000595690 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
SPTBN4-208ENST00000595690 ZCCHC6Q5VYS8 1495 aaKnown RBP23.22■■□□□ 1.31
SPTBN4-208ENST00000595690 DCAF1Q9Y4B6 1507 aa23.2■■□□□ 1.3
SPTBN4-208ENST00000595690 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
SPTBN4-208ENST00000595690 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
SPTBN4-208ENST00000595690 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
SPTBN4-208ENST00000595690 CUX2O14529 1486 aa22.35■■□□□ 1.17
SPTBN4-208ENST00000595690 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
SPTBN4-208ENST00000595690 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
SPTBN4-208ENST00000595690 ATAD2BQ9ULI0 1458 aa22.14■■□□□ 1.13
SPTBN4-208ENST00000595690 NESP48681 1621 aa22.04■■□□□ 1.12
SPTBN4-208ENST00000595690 HMGXB3Q12766 1538 aa22.04■■□□□ 1.12
SPTBN4-208ENST00000595690 SMARCA2P51531 1590 aa22■■□□□ 1.11
SPTBN4-208ENST00000595690 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
SPTBN4-208ENST00000595690 THOC2Q8NI27 1593 aaKnown RBP21.9■■□□□ 1.1
SPTBN4-208ENST00000595690 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
SPTBN4-208ENST00000595690 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
SPTBN4-208ENST00000595690 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
SPTBN4-208ENST00000595690 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
SPTBN4-208ENST00000595690 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
SPTBN4-208ENST00000595690 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
SPTBN4-208ENST00000595690 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
SPTBN4-208ENST00000595690 TRIM41Q8WV44 630 aa21.57■■□□□ 1.04
SPTBN4-208ENST00000595690 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
SPTBN4-208ENST00000595690 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.03
SPTBN4-208ENST00000595690 WDR62O43379 1518 aa21.5■■□□□ 1.03
SPTBN4-208ENST00000595690 WIZO95785 1651 aa21.34■■□□□ 1.01
SPTBN4-208ENST00000595690 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
SPTBN4-208ENST00000595690 FANCD2Q9BXW9 1451 aa21.29■■□□□ 1
SPTBN4-208ENST00000595690 CFTRP13569 1480 aa21.24■□□□□ 0.99
SPTBN4-208ENST00000595690 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
SPTBN4-208ENST00000595690 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
SPTBN4-208ENST00000595690 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
SPTBN4-208ENST00000595690 TOP2AP11388 1531 aaKnown RBP21.05■□□□□ 0.96
SPTBN4-208ENST00000595690 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
SPTBN4-208ENST00000595690 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
SPTBN4-208ENST00000595690 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
SPTBN4-208ENST00000595690 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
SPTBN4-208ENST00000595690 ARHGEF11O15085 1522 aa20.94■□□□□ 0.94
SPTBN4-208ENST00000595690 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
SPTBN4-208ENST00000595690 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
SPTBN4-208ENST00000595690 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
SPTBN4-208ENST00000595690 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
SPTBN4-208ENST00000595690 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
SPTBN4-208ENST00000595690 CYB5RLQ6IPT4 315 aa20.77■□□□□ 0.92
SPTBN4-208ENST00000595690 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
SPTBN4-208ENST00000595690 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
SPTBN4-208ENST00000595690 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
SPTBN4-208ENST00000595690 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
SPTBN4-208ENST00000595690 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
SPTBN4-208ENST00000595690 CHD1O14646 1710 aa20.7■□□□□ 0.9
SPTBN4-208ENST00000595690 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
SPTBN4-208ENST00000595690 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
SPTBN4-208ENST00000595690 FBLN2P98095 1184 aa20.56■□□□□ 0.88
SPTBN4-208ENST00000595690 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
SPTBN4-208ENST00000595690 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
SPTBN4-208ENST00000595690 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
SPTBN4-208ENST00000595690 SOGA1O94964 1423 aa20.49■□□□□ 0.87
SPTBN4-208ENST00000595690 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
SPTBN4-208ENST00000595690 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
SPTBN4-208ENST00000595690 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
SPTBN4-208ENST00000595690 MAGI1Q96QZ7 1491 aaPredicted RBP20.41■□□□□ 0.86
SPTBN4-208ENST00000595690 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
SPTBN4-208ENST00000595690 CHMP7Q8WUX9 453 aaPredicted RBP20.37■□□□□ 0.85
SPTBN4-208ENST00000595690 CUX1P39880 1505 aa20.37■□□□□ 0.85
SPTBN4-208ENST00000595690 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
SPTBN4-208ENST00000595690 SYNJ2O15056 1496 aa20.35■□□□□ 0.85
SPTBN4-208ENST00000595690 GAPVD1Q14C86 1478 aa20.29■□□□□ 0.84
SPTBN4-208ENST00000595690 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
SPTBN4-208ENST00000595690 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
SPTBN4-208ENST00000595690 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
SPTBN4-208ENST00000595690 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
SPTBN4-208ENST00000595690 ERCC6L2Q5T890 1561 aa20.18■□□□□ 0.82
SPTBN4-208ENST00000595690 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
SPTBN4-208ENST00000595690 NUP160Q12769 1436 aa20.1■□□□□ 0.81
SPTBN4-208ENST00000595690 CEP170Q5SW79 1584 aa20.08■□□□□ 0.8
SPTBN4-208ENST00000595690 ADAMTS12P58397 1594 aa20.06■□□□□ 0.8
SPTBN4-208ENST00000595690 SHROOM2Q13796 1616 aa20.04■□□□□ 0.8
SPTBN4-208ENST00000595690 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
SPTBN4-208ENST00000595690 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
SPTBN4-208ENST00000595690 KIF13AQ9H1H9 1805 aa19.96■□□□□ 0.79
SPTBN4-208ENST00000595690 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
SPTBN4-208ENST00000595690 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
SPTBN4-208ENST00000595690 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
SPTBN4-208ENST00000595690 PRG4Q92954 1404 aaPredicted RBP19.89■□□□□ 0.77
SPTBN4-208ENST00000595690 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
SPTBN4-208ENST00000595690 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms