RNA–Protein interactions for RNA: ENST00000595681.5

SH2D3A-204, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 1,750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-204ENST00000595681 NISCHQ9Y2I1 1504 aa50.61■■■■■ 5.69
SH2D3A-204ENST00000595681 CCDC180Q9P1Z9 1646 aa44.89■■■■■ 4.78
SH2D3A-204ENST00000595681 ABCC9O60706 1549 aa44.1■■■■■ 4.65
SH2D3A-204ENST00000595681 DCAF8L2P0C7V8 631 aa42.37■■■■■ 4.37
SH2D3A-204ENST00000595681 RB1CC1Q8TDY2 1594 aa42.29■■■■■ 4.36
SH2D3A-204ENST00000595681 NACADO15069 1562 aa42.24■■■■■ 4.35
SH2D3A-204ENST00000595681 ZCCHC6Q5VYS8 1495 aaKnown RBP42.16■■■■■ 4.34
SH2D3A-204ENST00000595681 MYO15BQ96JP2 1530 aa41.96■■■■■ 4.31
SH2D3A-204ENST00000595681 DCAF1Q9Y4B6 1507 aa41.8■■■■■ 4.28
SH2D3A-204ENST00000595681 UNC13AQ9UPW8 1703 aa41.37■■■■■ 4.21
SH2D3A-204ENST00000595681 PABPN1Q86U42 306 aaKnown RBP eCLIP41.27■■■■■ 4.2
SH2D3A-204ENST00000595681 BICRAQ9NZM4 1560 aa41.12■■■■■ 4.17
SH2D3A-204ENST00000595681 SCRIBQ14160 1630 aa41.1■■■■■ 4.17
SH2D3A-204ENST00000595681 DNAJC5BQ9UF47 199 aa40.59■■■■■ 4.09
SH2D3A-204ENST00000595681 SHROOM4Q9ULL8 1493 aa40.51■■■■■ 4.08
SH2D3A-204ENST00000595681 EIF4G1Q04637 1599 aaKnown RBP40■■■■□ 3.99
SH2D3A-204ENST00000595681 CC2D2AQ9P2K1 1620 aa39.84■■■■□ 3.97
SH2D3A-204ENST00000595681 CECR2Q9BXF3 1484 aa39.59■■■■□ 3.93
SH2D3A-204ENST00000595681 SMARCA4P51532 1647 aa39.26■■■■□ 3.88
SH2D3A-204ENST00000595681 BAZ1AQ9NRL2 1556 aaPredicted RBP39.18■■■■□ 3.86
SH2D3A-204ENST00000595681 ATAD2BQ9ULI0 1458 aa39.08■■■■□ 3.85
SH2D3A-204ENST00000595681 MROH2BQ7Z745 1585 aa39.06■■■■□ 3.84
SH2D3A-204ENST00000595681 NCAPD3P42695 1498 aa39.03■■■■□ 3.84
SH2D3A-204ENST00000595681 SMARCA2P51531 1590 aa38.95■■■■□ 3.83
SH2D3A-204ENST00000595681 PEG3Q9GZU2 1588 aa38.84■■■■□ 3.81
SH2D3A-204ENST00000595681 HMGXB3Q12766 1538 aa38.8■■■■□ 3.8
SH2D3A-204ENST00000595681 BAZ1BQ9UIG0 1483 aaKnown RBP38.73■■■■□ 3.79
SH2D3A-204ENST00000595681 WIZO95785 1651 aa38.62■■■■□ 3.77
SH2D3A-204ENST00000595681 RSF1Q96T23 1441 aaPredicted RBP38.61■■■■□ 3.77
SH2D3A-204ENST00000595681 NESP48681 1621 aa38.2■■■■□ 3.7
SH2D3A-204ENST00000595681 TOP2AP11388 1531 aaKnown RBP38.16■■■■□ 3.7
SH2D3A-204ENST00000595681 LAMC3Q9Y6N6 1575 aa37.95■■■■□ 3.67
SH2D3A-204ENST00000595681 ERCC6Q03468 1493 aa37.94■■■■□ 3.66
SH2D3A-204ENST00000595681 CADPSQ9ULU8 1353 aa37.91■■■■□ 3.66
SH2D3A-204ENST00000595681 CCDC88BA6NC98 1476 aa37.77■■■■□ 3.64
SH2D3A-204ENST00000595681 PDS5BQ9NTI5 1447 aa37.71■■■■□ 3.63
SH2D3A-204ENST00000595681 CFTRP13569 1480 aa37.68■■■■□ 3.62
SH2D3A-204ENST00000595681 SUPT5HO00267 1087 aaKnown RBP37.67■■■■□ 3.62
SH2D3A-204ENST00000595681 KIF21AQ7Z4S6 1674 aa37.65■■■■□ 3.62
SH2D3A-204ENST00000595681 THOC2Q8NI27 1593 aaKnown RBP37.53■■■■□ 3.6
SH2D3A-204ENST00000595681 CUX2O14529 1486 aa37.5■■■■□ 3.59
SH2D3A-204ENST00000595681 FANCD2Q9BXW9 1451 aa37.48■■■■□ 3.59
SH2D3A-204ENST00000595681 CEP164Q9UPV0 1460 aa37.4■■■■□ 3.58
SH2D3A-204ENST00000595681 MRC2Q9UBG0 1479 aa37.35■■■■□ 3.57
SH2D3A-204ENST00000595681 PRDM2Q13029 1718 aa37.27■■■■□ 3.56
SH2D3A-204ENST00000595681 WDR62O43379 1518 aa37.23■■■■□ 3.55
SH2D3A-204ENST00000595681 URB2Q14146 1524 aaKnown RBP37.14■■■■□ 3.54
SH2D3A-204ENST00000595681 TOPBP1Q92547 1522 aa36.89■■■■□ 3.5
SH2D3A-204ENST00000595681 DNMBPQ6XZF7 1577 aa36.8■■■■□ 3.48
SH2D3A-204ENST00000595681 ABCC8Q09428 1581 aa36.77■■■■□ 3.48
SH2D3A-204ENST00000595681 CUX1P39880 1505 aa36.63■■■■□ 3.46
SH2D3A-204ENST00000595681 IFT140Q96RY7 1462 aa36.61■■■■□ 3.45
SH2D3A-204ENST00000595681 POLA1P09884 1462 aaPredicted RBP36.58■■■■□ 3.45
SH2D3A-204ENST00000595681 ZNF608Q9ULD9 1512 aaPredicted RBP36.56■■■■□ 3.44
SH2D3A-204ENST00000595681 FGD5Q6ZNL6 1462 aa36.5■■■■□ 3.43
SH2D3A-204ENST00000595681 RAD54L2Q9Y4B4 1467 aa36.48■■■■□ 3.43
SH2D3A-204ENST00000595681 TARBP1Q13395 1621 aaKnown RBP36.47■■■■□ 3.43
SH2D3A-204ENST00000595681 DNAJC5Q9H3Z4 198 aa36.45■■■■□ 3.43
SH2D3A-204ENST00000595681 SOGA1O94964 1423 aa36.42■■■■□ 3.42
SH2D3A-204ENST00000595681 WRNQ14191 1432 aaPredicted RBP eCLIP36.36■■■■□ 3.41
SH2D3A-204ENST00000595681 AQRO60306 1485 aaKnown RBP eCLIP36.34■■■■□ 3.41
SH2D3A-204ENST00000595681 EIF4G3O43432 1585 aaKnown RBP36.33■■■■□ 3.41
SH2D3A-204ENST00000595681 SYNJ1O43426 1573 aa36.31■■■■□ 3.4
SH2D3A-204ENST00000595681 TDRD9Q8NDG6 1382 aaKnown RBP36.27■■■■□ 3.4
SH2D3A-204ENST00000595681 TOP2BQ02880 1626 aa36.25■■■■□ 3.39
SH2D3A-204ENST00000595681 BIVM-ERCC5R4GMW8 1640 aa36.23■■■■□ 3.39
SH2D3A-204ENST00000595681 WDR97A6NE52 1622 aa36.14■■■■□ 3.38
SH2D3A-204ENST00000595681 ABCA10Q8WWZ4 1543 aa36.11■■■■□ 3.37
SH2D3A-204ENST00000595681 OSCARQ8IYS5 282 aa36■■■■□ 3.35
SH2D3A-204ENST00000595681 GAPVD1Q14C86 1478 aa35.99■■■■□ 3.35
SH2D3A-204ENST00000595681 SNAPC4Q5SXM2 1469 aa35.97■■■■□ 3.35
SH2D3A-204ENST00000595681 GRIN2BQ13224 1484 aa35.96■■■■□ 3.35
SH2D3A-204ENST00000595681 ABCA5Q8WWZ7 1642 aa35.96■■■■□ 3.35
SH2D3A-204ENST00000595681 FBLN2P98095 1184 aa35.89■■■■□ 3.34
SH2D3A-204ENST00000595681 PBRM1Q86U86 1689 aa35.86■■■■□ 3.33
SH2D3A-204ENST00000595681 CHD1O14646 1710 aa35.85■■■■□ 3.33
SH2D3A-204ENST00000595681 MAGI1Q96QZ7 1491 aaPredicted RBP35.85■■■■□ 3.33
SH2D3A-204ENST00000595681 CHMP7Q8WUX9 453 aaPredicted RBP35.74■■■■□ 3.31
SH2D3A-204ENST00000595681 SYNJ2O15056 1496 aa35.73■■■■□ 3.31
SH2D3A-204ENST00000595681 ERICH3Q5RHP9 1530 aa35.64■■■■□ 3.3
SH2D3A-204ENST00000595681 ADAMTS12P58397 1594 aa35.62■■■■□ 3.29
SH2D3A-204ENST00000595681 KIF27Q86VH2 1401 aa35.57■■■■□ 3.29
SH2D3A-204ENST00000595681 FHAD1B1AJZ9 1412 aa35.55■■■■□ 3.28
SH2D3A-204ENST00000595681 GRIN2AQ12879 1464 aa35.52■■■■□ 3.28
SH2D3A-204ENST00000595681 TRIM41Q8WV44 630 aa35.51■■■■□ 3.28
SH2D3A-204ENST00000595681 IGF1RP08069 1367 aa35.5■■■■□ 3.27
SH2D3A-204ENST00000595681 CLASP1Q7Z460 1538 aa35.49■■■■□ 3.27
SH2D3A-204ENST00000595681 ARHGEF11O15085 1522 aa35.44■■■■□ 3.26
SH2D3A-204ENST00000595681 RIMBP3CA6NJZ7 1639 aa35.43■■■■□ 3.26
SH2D3A-204ENST00000595681 RIMBP3BA6NNM3 1639 aa35.43■■■■□ 3.26
SH2D3A-204ENST00000595681 RIMBP3Q9UFD9 1639 aa35.43■■■■□ 3.26
SH2D3A-204ENST00000595681 RUSC2Q8N2Y8 1516 aa35.39■■■■□ 3.26
SH2D3A-204ENST00000595681 CEP170Q5SW79 1584 aa35.38■■■■□ 3.25
SH2D3A-204ENST00000595681 NUP160Q12769 1436 aa35.37■■■■□ 3.25
SH2D3A-204ENST00000595681 CUL7Q14999 1698 aa35.28■■■■□ 3.24
SH2D3A-204ENST00000595681 CARMIL1Q5VZK9 1371 aa35.26■■■■□ 3.23
SH2D3A-204ENST00000595681 ARAP1Q96P48 1450 aa35.18■■■■□ 3.22
SH2D3A-204ENST00000595681 CYB5RLQ6IPT4 315 aa35.15■■■■□ 3.22
SH2D3A-204ENST00000595681 CHIC1Q5VXU3 224 aa35.13■■■■□ 3.21
SH2D3A-204ENST00000595681 ERCC6L2Q5T890 1561 aa35.1■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms