RNA–Protein interactions for RNA: ENST00000595637.1

SNAPC2-204, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 2

Gene SNAPC2, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-204ENST00000595637 NISCHQ9Y2I1 1504 aa36.19■■■■□ 3.38
SNAPC2-204ENST00000595637 CCDC180Q9P1Z9 1646 aa32.36■■■□□ 2.77
SNAPC2-204ENST00000595637 ABCC9O60706 1549 aa31.62■■■□□ 2.65
SNAPC2-204ENST00000595637 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
SNAPC2-204ENST00000595637 NACADO15069 1562 aa30.36■■■□□ 2.45
SNAPC2-204ENST00000595637 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
SNAPC2-204ENST00000595637 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
SNAPC2-204ENST00000595637 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
SNAPC2-204ENST00000595637 DCAF1Q9Y4B6 1507 aa29.97■■■□□ 2.39
SNAPC2-204ENST00000595637 UNC13AQ9UPW8 1703 aa29.85■■■□□ 2.37
SNAPC2-204ENST00000595637 BICRAQ9NZM4 1560 aa29.51■■■□□ 2.31
SNAPC2-204ENST00000595637 SCRIBQ14160 1630 aa29.45■■■□□ 2.31
SNAPC2-204ENST00000595637 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
SNAPC2-204ENST00000595637 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
SNAPC2-204ENST00000595637 DNAJC5BQ9UF47 199 aa29.1■■■□□ 2.25
SNAPC2-204ENST00000595637 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
SNAPC2-204ENST00000595637 CC2D2AQ9P2K1 1620 aa28.65■■■□□ 2.18
SNAPC2-204ENST00000595637 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
SNAPC2-204ENST00000595637 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
SNAPC2-204ENST00000595637 BAZ1AQ9NRL2 1556 aaPredicted RBP28.1■■■□□ 2.09
SNAPC2-204ENST00000595637 SMARCA2P51531 1590 aa27.98■■■□□ 2.07
SNAPC2-204ENST00000595637 ATAD2BQ9ULI0 1458 aa27.96■■■□□ 2.07
SNAPC2-204ENST00000595637 NCAPD3P42695 1498 aa27.95■■■□□ 2.07
SNAPC2-204ENST00000595637 HMGXB3Q12766 1538 aa27.89■■■□□ 2.06
SNAPC2-204ENST00000595637 MROH2BQ7Z745 1585 aa27.89■■■□□ 2.05
SNAPC2-204ENST00000595637 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.05
SNAPC2-204ENST00000595637 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
SNAPC2-204ENST00000595637 WIZO95785 1651 aa27.64■■■□□ 2.02
SNAPC2-204ENST00000595637 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
SNAPC2-204ENST00000595637 NESP48681 1621 aa27.34■■□□□ 1.97
SNAPC2-204ENST00000595637 TOP2AP11388 1531 aaKnown RBP27.33■■□□□ 1.97
SNAPC2-204ENST00000595637 LAMC3Q9Y6N6 1575 aa27.31■■□□□ 1.96
SNAPC2-204ENST00000595637 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
SNAPC2-204ENST00000595637 KIF21AQ7Z4S6 1674 aa27.13■■□□□ 1.93
SNAPC2-204ENST00000595637 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
SNAPC2-204ENST00000595637 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
SNAPC2-204ENST00000595637 CUX2O14529 1486 aa27.05■■□□□ 1.92
SNAPC2-204ENST00000595637 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
SNAPC2-204ENST00000595637 PRDM2Q13029 1718 aa26.96■■□□□ 1.91
SNAPC2-204ENST00000595637 CFTRP13569 1480 aa26.96■■□□□ 1.91
SNAPC2-204ENST00000595637 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
SNAPC2-204ENST00000595637 FANCD2Q9BXW9 1451 aa26.85■■□□□ 1.89
SNAPC2-204ENST00000595637 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
SNAPC2-204ENST00000595637 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
SNAPC2-204ENST00000595637 WDR62O43379 1518 aa26.78■■□□□ 1.88
SNAPC2-204ENST00000595637 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
SNAPC2-204ENST00000595637 URB2Q14146 1524 aaKnown RBP26.6■■□□□ 1.85
SNAPC2-204ENST00000595637 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
SNAPC2-204ENST00000595637 TOPBP1Q92547 1522 aa26.42■■□□□ 1.82
SNAPC2-204ENST00000595637 ABCC8Q09428 1581 aa26.4■■□□□ 1.82
SNAPC2-204ENST00000595637 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
SNAPC2-204ENST00000595637 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
SNAPC2-204ENST00000595637 CUX1P39880 1505 aa26.19■■□□□ 1.78
SNAPC2-204ENST00000595637 POLA1P09884 1462 aaPredicted RBP26.18■■□□□ 1.78
SNAPC2-204ENST00000595637 TARBP1Q13395 1621 aaKnown RBP26.18■■□□□ 1.78
SNAPC2-204ENST00000595637 EIF4G3O43432 1585 aaKnown RBP26.15■■□□□ 1.78
SNAPC2-204ENST00000595637 ZNF608Q9ULD9 1512 aaPredicted RBP26.14■■□□□ 1.78
SNAPC2-204ENST00000595637 FGD5Q6ZNL6 1462 aa26.11■■□□□ 1.77
SNAPC2-204ENST00000595637 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
SNAPC2-204ENST00000595637 SOGA1O94964 1423 aa26.02■■□□□ 1.76
SNAPC2-204ENST00000595637 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
SNAPC2-204ENST00000595637 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
SNAPC2-204ENST00000595637 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
SNAPC2-204ENST00000595637 SYNJ1O43426 1573 aa25.95■■□□□ 1.75
SNAPC2-204ENST00000595637 AQRO60306 1485 aaKnown RBP eCLIP25.95■■□□□ 1.741e-8■■■■□ 21.1
SNAPC2-204ENST00000595637 WRNQ14191 1432 aaPredicted RBP eCLIP25.95■■□□□ 1.74
SNAPC2-204ENST00000595637 TDRD9Q8NDG6 1382 aaKnown RBP25.87■■□□□ 1.73
SNAPC2-204ENST00000595637 CHD1O14646 1710 aa25.87■■□□□ 1.73
SNAPC2-204ENST00000595637 PBRM1Q86U86 1689 aa25.85■■□□□ 1.73
SNAPC2-204ENST00000595637 ABCA10Q8WWZ4 1543 aa25.84■■□□□ 1.73
SNAPC2-204ENST00000595637 ABCA5Q8WWZ7 1642 aa25.83■■□□□ 1.73
SNAPC2-204ENST00000595637 OSCARQ8IYS5 282 aa25.79■■□□□ 1.72
SNAPC2-204ENST00000595637 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
SNAPC2-204ENST00000595637 SNAPC4Q5SXM2 1469 aa25.77■■□□□ 1.72
SNAPC2-204ENST00000595637 GAPVD1Q14C86 1478 aa25.75■■□□□ 1.71
SNAPC2-204ENST00000595637 MAGI1Q96QZ7 1491 aaPredicted RBP25.74■■□□□ 1.71
SNAPC2-204ENST00000595637 SYNJ2O15056 1496 aa25.63■■□□□ 1.69
SNAPC2-204ENST00000595637 FBLN2P98095 1184 aa25.61■■□□□ 1.69
SNAPC2-204ENST00000595637 ADAMTS12P58397 1594 aa25.59■■□□□ 1.69
SNAPC2-204ENST00000595637 ERICH3Q5RHP9 1530 aa25.56■■□□□ 1.68
SNAPC2-204ENST00000595637 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
SNAPC2-204ENST00000595637 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
SNAPC2-204ENST00000595637 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
SNAPC2-204ENST00000595637 CHMP7Q8WUX9 453 aaPredicted RBP25.53■■□□□ 1.68
SNAPC2-204ENST00000595637 CLASP1Q7Z460 1538 aa25.52■■□□□ 1.68
SNAPC2-204ENST00000595637 ARHGEF11O15085 1522 aa25.49■■□□□ 1.67
SNAPC2-204ENST00000595637 GRIN2AQ12879 1464 aa25.46■■□□□ 1.67
SNAPC2-204ENST00000595637 FHAD1B1AJZ9 1412 aa25.44■■□□□ 1.66
SNAPC2-204ENST00000595637 KIF27Q86VH2 1401 aa25.4■■□□□ 1.66
SNAPC2-204ENST00000595637 CUL7Q14999 1698 aa25.37■■□□□ 1.65
SNAPC2-204ENST00000595637 CEP170Q5SW79 1584 aa25.37■■□□□ 1.65
SNAPC2-204ENST00000595637 NUP160Q12769 1436 aa25.33■■□□□ 1.65
SNAPC2-204ENST00000595637 TRIM41Q8WV44 630 aa25.33■■□□□ 1.65
SNAPC2-204ENST00000595637 ARAP1Q96P48 1450 aa25.28■■□□□ 1.64
SNAPC2-204ENST00000595637 IGF1RP08069 1367 aa25.25■■□□□ 1.63
SNAPC2-204ENST00000595637 SHROOM2Q13796 1616 aa25.24■■□□□ 1.63
SNAPC2-204ENST00000595637 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
SNAPC2-204ENST00000595637 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
SNAPC2-204ENST00000595637 ERCC6L2Q5T890 1561 aa25.13■■□□□ 1.61
SNAPC2-204ENST00000595637 CARMIL1Q5VZK9 1371 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms