RNA–Protein interactions for RNA: ENST00000595448.1

ERF-204, Transcript of ETS2 repressor factor, humanhuman

TSL 1 (best)

Gene ERF, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERF-204ENST00000595448 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
ERF-204ENST00000595448 CCDC180Q9P1Z9 1646 aa27.25■■□□□ 1.95
ERF-204ENST00000595448 ABCC9O60706 1549 aa27■■□□□ 1.91
ERF-204ENST00000595448 RB1CC1Q8TDY2 1594 aa25.81■■□□□ 1.72
ERF-204ENST00000595448 NACADO15069 1562 aa25.64■■□□□ 1.69
ERF-204ENST00000595448 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
ERF-204ENST00000595448 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
ERF-204ENST00000595448 MYO15BQ96JP2 1530 aa25.28■■□□□ 1.64
ERF-204ENST00000595448 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
ERF-204ENST00000595448 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
ERF-204ENST00000595448 DCAF1Q9Y4B6 1507 aa25.04■■□□□ 1.6
ERF-204ENST00000595448 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
ERF-204ENST00000595448 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
ERF-204ENST00000595448 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
ERF-204ENST00000595448 SHROOM4Q9ULL8 1493 aa24.69■■□□□ 1.54
ERF-204ENST00000595448 CC2D2AQ9P2K1 1620 aa24.43■■□□□ 1.5
ERF-204ENST00000595448 EIF4G1Q04637 1599 aaKnown RBP24.4■■□□□ 1.5
ERF-204ENST00000595448 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
ERF-204ENST00000595448 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
ERF-204ENST00000595448 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
ERF-204ENST00000595448 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
ERF-204ENST00000595448 ATAD2BQ9ULI0 1458 aa23.57■■□□□ 1.36
ERF-204ENST00000595448 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
ERF-204ENST00000595448 HMGXB3Q12766 1538 aa23.52■■□□□ 1.36
ERF-204ENST00000595448 BAZ1BQ9UIG0 1483 aaKnown RBP23.42■■□□□ 1.34
ERF-204ENST00000595448 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
ERF-204ENST00000595448 MROH2BQ7Z745 1585 aa23.38■■□□□ 1.33
ERF-204ENST00000595448 ERCC6Q03468 1493 aa23.33■■□□□ 1.33
ERF-204ENST00000595448 NESP48681 1621 aa23.23■■□□□ 1.31
ERF-204ENST00000595448 CUX2O14529 1486 aa23.18■■□□□ 1.3
ERF-204ENST00000595448 WIZO95785 1651 aa23.17■■□□□ 1.3
ERF-204ENST00000595448 LAMC3Q9Y6N6 1575 aa23.13■■□□□ 1.29
ERF-204ENST00000595448 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
ERF-204ENST00000595448 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
ERF-204ENST00000595448 PDS5BQ9NTI5 1447 aa22.93■■□□□ 1.26
ERF-204ENST00000595448 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
ERF-204ENST00000595448 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.25
ERF-204ENST00000595448 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
ERF-204ENST00000595448 DNAJC5Q9H3Z4 198 aa22.86■■□□□ 1.25
ERF-204ENST00000595448 MRC2Q9UBG0 1479 aa22.76■■□□□ 1.23
ERF-204ENST00000595448 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
ERF-204ENST00000595448 WDR62O43379 1518 aa22.71■■□□□ 1.23
ERF-204ENST00000595448 PRDM2Q13029 1718 aa22.7■■□□□ 1.22
ERF-204ENST00000595448 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
ERF-204ENST00000595448 CFTRP13569 1480 aa22.68■■□□□ 1.22
ERF-204ENST00000595448 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
ERF-204ENST00000595448 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
ERF-204ENST00000595448 TOPBP1Q92547 1522 aa22.28■■□□□ 1.16
ERF-204ENST00000595448 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
ERF-204ENST00000595448 IFT140Q96RY7 1462 aa22.23■■□□□ 1.15
ERF-204ENST00000595448 ABCC8Q09428 1581 aa22.23■■□□□ 1.15
ERF-204ENST00000595448 ZNF608Q9ULD9 1512 aaPredicted RBP22.17■■□□□ 1.14
ERF-204ENST00000595448 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
ERF-204ENST00000595448 TARBP1Q13395 1621 aaKnown RBP22.09■■□□□ 1.13
ERF-204ENST00000595448 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
ERF-204ENST00000595448 SUPT5HO00267 1087 aaKnown RBP22.06■■□□□ 1.12
ERF-204ENST00000595448 POLA1P09884 1462 aaPredicted RBP22.06■■□□□ 1.12
ERF-204ENST00000595448 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
ERF-204ENST00000595448 CHD1O14646 1710 aa22.01■■□□□ 1.11
ERF-204ENST00000595448 AQRO60306 1485 aaKnown RBP eCLIP21.97■■□□□ 1.111e-8■■□□□ 13.5
ERF-204ENST00000595448 CUX1P39880 1505 aa21.97■■□□□ 1.11
ERF-204ENST00000595448 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
ERF-204ENST00000595448 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
ERF-204ENST00000595448 SOGA1O94964 1423 aa21.93■■□□□ 1.1
ERF-204ENST00000595448 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
ERF-204ENST00000595448 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
ERF-204ENST00000595448 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
ERF-204ENST00000595448 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
ERF-204ENST00000595448 TDRD9Q8NDG6 1382 aaKnown RBP21.86■■□□□ 1.09
ERF-204ENST00000595448 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
ERF-204ENST00000595448 FBLN2P98095 1184 aa21.82■■□□□ 1.08
ERF-204ENST00000595448 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
ERF-204ENST00000595448 ARHGEF11O15085 1522 aa21.81■■□□□ 1.08
ERF-204ENST00000595448 GRIN2BQ13224 1484 aa21.76■■□□□ 1.07
ERF-204ENST00000595448 MAGI1Q96QZ7 1491 aaPredicted RBP21.75■■□□□ 1.07
ERF-204ENST00000595448 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
ERF-204ENST00000595448 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
ERF-204ENST00000595448 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
ERF-204ENST00000595448 GAPVD1Q14C86 1478 aa21.7■■□□□ 1.06
ERF-204ENST00000595448 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
ERF-204ENST00000595448 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
ERF-204ENST00000595448 SYNJ2O15056 1496 aa21.66■■□□□ 1.06
ERF-204ENST00000595448 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
ERF-204ENST00000595448 CLASP1Q7Z460 1538 aa21.65■■□□□ 1.06
ERF-204ENST00000595448 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
ERF-204ENST00000595448 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
ERF-204ENST00000595448 CYB5RLQ6IPT4 315 aa21.58■■□□□ 1.05
ERF-204ENST00000595448 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
ERF-204ENST00000595448 GRIN2AQ12879 1464 aa21.48■■□□□ 1.03
ERF-204ENST00000595448 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
ERF-204ENST00000595448 CEP170Q5SW79 1584 aa21.43■■□□□ 1.02
ERF-204ENST00000595448 FHAD1B1AJZ9 1412 aa21.42■■□□□ 1.02
ERF-204ENST00000595448 NUP160Q12769 1436 aa21.37■■□□□ 1.01
ERF-204ENST00000595448 ERCC6L2Q5T890 1561 aa21.33■■□□□ 1.01
ERF-204ENST00000595448 SHROOM2Q13796 1616 aa21.33■■□□□ 1
ERF-204ENST00000595448 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
ERF-204ENST00000595448 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
ERF-204ENST00000595448 CUL7Q14999 1698 aa21.25■□□□□ 0.99
ERF-204ENST00000595448 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
ERF-204ENST00000595448 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms