RNA–Protein interactions for RNA: ENST00000595379.1

PAF1-203, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-203ENST00000595379 NISCHQ9Y2I1 1504 aa24.93■■□□□ 1.58
PAF1-203ENST00000595379 ABCC9O60706 1549 aa23.39■■□□□ 1.34
PAF1-203ENST00000595379 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
PAF1-203ENST00000595379 CCDC180Q9P1Z9 1646 aa22.72■■□□□ 1.23
PAF1-203ENST00000595379 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.1
PAF1-203ENST00000595379 NACADO15069 1562 aa21.65■■□□□ 1.06
PAF1-203ENST00000595379 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
PAF1-203ENST00000595379 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
PAF1-203ENST00000595379 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
PAF1-203ENST00000595379 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
PAF1-203ENST00000595379 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
PAF1-203ENST00000595379 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
PAF1-203ENST00000595379 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
PAF1-203ENST00000595379 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
PAF1-203ENST00000595379 SHROOM4Q9ULL8 1493 aa21.04■□□□□ 0.96
PAF1-203ENST00000595379 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
PAF1-203ENST00000595379 DCAF1Q9Y4B6 1507 aa20.61■□□□□ 0.89
PAF1-203ENST00000595379 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
PAF1-203ENST00000595379 CUX2O14529 1486 aa20.54■□□□□ 0.88
PAF1-203ENST00000595379 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
PAF1-203ENST00000595379 ERCC6Q03468 1493 aa20.17■□□□□ 0.82
PAF1-203ENST00000595379 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
PAF1-203ENST00000595379 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
PAF1-203ENST00000595379 NESP48681 1621 aa19.92■□□□□ 0.78
PAF1-203ENST00000595379 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
PAF1-203ENST00000595379 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.76
PAF1-203ENST00000595379 HMGXB3Q12766 1538 aa19.79■□□□□ 0.76
PAF1-203ENST00000595379 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
PAF1-203ENST00000595379 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
PAF1-203ENST00000595379 KIF21AQ7Z4S6 1674 aa19.65■□□□□ 0.74
PAF1-203ENST00000595379 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
PAF1-203ENST00000595379 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.72
PAF1-203ENST00000595379 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
PAF1-203ENST00000595379 PEG3Q9GZU2 1588 aa19.5■□□□□ 0.71
PAF1-203ENST00000595379 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
PAF1-203ENST00000595379 WDR62O43379 1518 aa19.45■□□□□ 0.7
PAF1-203ENST00000595379 MRC2Q9UBG0 1479 aa19.42■□□□□ 0.7
PAF1-203ENST00000595379 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
PAF1-203ENST00000595379 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.69
PAF1-203ENST00000595379 RIMBP3CA6NJZ7 1639 aa19.3■□□□□ 0.68
PAF1-203ENST00000595379 RIMBP3BA6NNM3 1639 aa19.3■□□□□ 0.68
PAF1-203ENST00000595379 RIMBP3Q9UFD9 1639 aa19.3■□□□□ 0.68
PAF1-203ENST00000595379 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
PAF1-203ENST00000595379 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
PAF1-203ENST00000595379 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
PAF1-203ENST00000595379 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
PAF1-203ENST00000595379 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
PAF1-203ENST00000595379 CFTRP13569 1480 aa18.99■□□□□ 0.63
PAF1-203ENST00000595379 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
PAF1-203ENST00000595379 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
PAF1-203ENST00000595379 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
PAF1-203ENST00000595379 AEBP2Q6ZN18 517 aaPredicted RBP18.92■□□□□ 0.62
PAF1-203ENST00000595379 ZNF608Q9ULD9 1512 aaPredicted RBP18.91■□□□□ 0.62
PAF1-203ENST00000595379 WIZO95785 1651 aa18.91■□□□□ 0.62
PAF1-203ENST00000595379 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
PAF1-203ENST00000595379 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
PAF1-203ENST00000595379 CHD1O14646 1710 aa18.77■□□□□ 0.59
PAF1-203ENST00000595379 EIF4G3O43432 1585 aaKnown RBP18.74■□□□□ 0.59
PAF1-203ENST00000595379 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
PAF1-203ENST00000595379 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
PAF1-203ENST00000595379 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
PAF1-203ENST00000595379 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
PAF1-203ENST00000595379 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
PAF1-203ENST00000595379 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
PAF1-203ENST00000595379 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
PAF1-203ENST00000595379 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
PAF1-203ENST00000595379 FBLN2P98095 1184 aa18.49■□□□□ 0.55
PAF1-203ENST00000595379 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
PAF1-203ENST00000595379 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
PAF1-203ENST00000595379 SYNJ1O43426 1573 aa18.39■□□□□ 0.53
PAF1-203ENST00000595379 ILDR1Q86SU0 546 aaPredicted RBP18.38■□□□□ 0.53
PAF1-203ENST00000595379 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
PAF1-203ENST00000595379 SNAPC4Q5SXM2 1469 aa18.37■□□□□ 0.53
PAF1-203ENST00000595379 RAD54L2Q9Y4B4 1467 aa18.35■□□□□ 0.53
PAF1-203ENST00000595379 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
PAF1-203ENST00000595379 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
PAF1-203ENST00000595379 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
PAF1-203ENST00000595379 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
PAF1-203ENST00000595379 SOGA1O94964 1423 aa18.29■□□□□ 0.52
PAF1-203ENST00000595379 SYNJ2O15056 1496 aa18.27■□□□□ 0.52
PAF1-203ENST00000595379 KIF13AQ9H1H9 1805 aa18.27■□□□□ 0.52
PAF1-203ENST00000595379 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
PAF1-203ENST00000595379 ERCC6L2Q5T890 1561 aa18.22■□□□□ 0.51
PAF1-203ENST00000595379 KDM4FA0A1W2PPD8 638 aa18.19■□□□□ 0.5
PAF1-203ENST00000595379 FGD5Q6ZNL6 1462 aa18.17■□□□□ 0.5
PAF1-203ENST00000595379 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
PAF1-203ENST00000595379 CEP170Q5SW79 1584 aa18.08■□□□□ 0.49
PAF1-203ENST00000595379 CUX1P39880 1505 aa18.08■□□□□ 0.48
PAF1-203ENST00000595379 SHROOM2Q13796 1616 aa18.07■□□□□ 0.48
PAF1-203ENST00000595379 NUP160Q12769 1436 aa18.04■□□□□ 0.48
PAF1-203ENST00000595379 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
PAF1-203ENST00000595379 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
PAF1-203ENST00000595379 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
PAF1-203ENST00000595379 ABCA10Q8WWZ4 1543 aa17.96■□□□□ 0.47
PAF1-203ENST00000595379 DIP2BQ9P265 1576 aa17.95■□□□□ 0.46
PAF1-203ENST00000595379 FAM69CQ0P6D2 419 aa17.94■□□□□ 0.46
PAF1-203ENST00000595379 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
PAF1-203ENST00000595379 KDM6BO15054 1643 aa17.92■□□□□ 0.46
PAF1-203ENST00000595379 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
PAF1-203ENST00000595379 PRG4Q92954 1404 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms