RNA–Protein interactions for RNA: ENST00000595255.1

CEACAM3-204, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 5

Gene CEACAM3, Length 1,455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-204ENST00000595255 NISCHQ9Y2I1 1504 aa38.06■■■■□ 3.68
CEACAM3-204ENST00000595255 ABCC9O60706 1549 aa34.63■■■■□ 3.13
CEACAM3-204ENST00000595255 CCDC180Q9P1Z9 1646 aa34.47■■■■□ 3.11
CEACAM3-204ENST00000595255 RB1CC1Q8TDY2 1594 aa32.9■■■□□ 2.86
CEACAM3-204ENST00000595255 DNAJC5BQ9UF47 199 aa32.8■■■□□ 2.84
CEACAM3-204ENST00000595255 NACADO15069 1562 aa32.59■■■□□ 2.81
CEACAM3-204ENST00000595255 UNC13AQ9UPW8 1703 aa32.32■■■□□ 2.76
CEACAM3-204ENST00000595255 PABPN1Q86U42 306 aaKnown RBP eCLIP32.08■■■□□ 2.73
CEACAM3-204ENST00000595255 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
CEACAM3-204ENST00000595255 DCAF8L2P0C7V8 631 aa32.03■■■□□ 2.72
CEACAM3-204ENST00000595255 BICRAQ9NZM4 1560 aa31.99■■■□□ 2.71
CEACAM3-204ENST00000595255 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
CEACAM3-204ENST00000595255 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
CEACAM3-204ENST00000595255 ZCCHC6Q5VYS8 1495 aaKnown RBP31.48■■■□□ 2.63
CEACAM3-204ENST00000595255 CC2D2AQ9P2K1 1620 aa31.37■■■□□ 2.61
CEACAM3-204ENST00000595255 CECR2Q9BXF3 1484 aa31.26■■■□□ 2.6
CEACAM3-204ENST00000595255 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
CEACAM3-204ENST00000595255 EIF4G1Q04637 1599 aaKnown RBP31.2■■■□□ 2.59
CEACAM3-204ENST00000595255 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
CEACAM3-204ENST00000595255 CUX2O14529 1486 aa30.1■■■□□ 2.41
CEACAM3-204ENST00000595255 NCAPD3P42695 1498 aa30.04■■■□□ 2.4
CEACAM3-204ENST00000595255 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
CEACAM3-204ENST00000595255 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
CEACAM3-204ENST00000595255 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
CEACAM3-204ENST00000595255 SMARCA2P51531 1590 aa29.82■■■□□ 2.36
CEACAM3-204ENST00000595255 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
CEACAM3-204ENST00000595255 NESP48681 1621 aa29.66■■■□□ 2.34
CEACAM3-204ENST00000595255 BAZ1AQ9NRL2 1556 aaPredicted RBP29.59■■■□□ 2.33
CEACAM3-204ENST00000595255 PEG3Q9GZU2 1588 aa29.58■■■□□ 2.33
CEACAM3-204ENST00000595255 THOC2Q8NI27 1593 aaKnown RBP29.57■■■□□ 2.32
CEACAM3-204ENST00000595255 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
CEACAM3-204ENST00000595255 LAMC3Q9Y6N6 1575 aa29.49■■■□□ 2.31
CEACAM3-204ENST00000595255 KIF21AQ7Z4S6 1674 aa29.41■■■□□ 2.3
CEACAM3-204ENST00000595255 MROH2BQ7Z745 1585 aa29.3■■■□□ 2.28
CEACAM3-204ENST00000595255 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
CEACAM3-204ENST00000595255 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
CEACAM3-204ENST00000595255 WDR62O43379 1518 aa29.04■■■□□ 2.24
CEACAM3-204ENST00000595255 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
CEACAM3-204ENST00000595255 WIZO95785 1651 aa28.97■■■□□ 2.23
CEACAM3-204ENST00000595255 CEP164Q9UPV0 1460 aa28.83■■■□□ 2.21
CEACAM3-204ENST00000595255 TRIM41Q8WV44 630 aa28.83■■■□□ 2.21
CEACAM3-204ENST00000595255 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
CEACAM3-204ENST00000595255 CFTRP13569 1480 aa28.69■■■□□ 2.18
CEACAM3-204ENST00000595255 PRDM2Q13029 1718 aa28.6■■■□□ 2.17
CEACAM3-204ENST00000595255 TOP2AP11388 1531 aaKnown RBP28.58■■■□□ 2.17
CEACAM3-204ENST00000595255 URB2Q14146 1524 aaKnown RBP28.57■■■□□ 2.16
CEACAM3-204ENST00000595255 OSCARQ8IYS5 282 aa28.53■■■□□ 2.16
CEACAM3-204ENST00000595255 RSF1Q96T23 1441 aaPredicted RBP28.51■■■□□ 2.15
CEACAM3-204ENST00000595255 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
CEACAM3-204ENST00000595255 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
CEACAM3-204ENST00000595255 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
CEACAM3-204ENST00000595255 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
CEACAM3-204ENST00000595255 ZNF608Q9ULD9 1512 aaPredicted RBP28.24■■■□□ 2.11
CEACAM3-204ENST00000595255 CCDC88BA6NC98 1476 aa28.19■■■□□ 2.1
CEACAM3-204ENST00000595255 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
CEACAM3-204ENST00000595255 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
CEACAM3-204ENST00000595255 EIF4G3O43432 1585 aaKnown RBP28.17■■■□□ 2.1
CEACAM3-204ENST00000595255 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
CEACAM3-204ENST00000595255 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
CEACAM3-204ENST00000595255 CHD1O14646 1710 aa28.08■■■□□ 2.09
CEACAM3-204ENST00000595255 TARBP1Q13395 1621 aaKnown RBP28.04■■■□□ 2.08
CEACAM3-204ENST00000595255 AQRO60306 1485 aaKnown RBP eCLIP27.9■■■□□ 2.06
CEACAM3-204ENST00000595255 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
CEACAM3-204ENST00000595255 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
CEACAM3-204ENST00000595255 CYB5RLQ6IPT4 315 aa27.85■■■□□ 2.05
CEACAM3-204ENST00000595255 WDR97A6NE52 1622 aa27.77■■■□□ 2.04
CEACAM3-204ENST00000595255 RAD54L2Q9Y4B4 1467 aa27.72■■■□□ 2.03
CEACAM3-204ENST00000595255 CLASP1Q7Z460 1538 aa27.7■■■□□ 2.03
CEACAM3-204ENST00000595255 FBLN2P98095 1184 aa27.69■■■□□ 2.02
CEACAM3-204ENST00000595255 SOGA1O94964 1423 aa27.67■■■□□ 2.02
CEACAM3-204ENST00000595255 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
CEACAM3-204ENST00000595255 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.01
CEACAM3-204ENST00000595255 TRHP20396 242 aaPredicted RBP27.64■■■□□ 2.01
CEACAM3-204ENST00000595255 FGD5Q6ZNL6 1462 aa27.62■■■□□ 2.01
CEACAM3-204ENST00000595255 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
CEACAM3-204ENST00000595255 MAGI1Q96QZ7 1491 aaPredicted RBP27.6■■■□□ 2.01
CEACAM3-204ENST00000595255 CUX1P39880 1505 aa27.56■■■□□ 2
CEACAM3-204ENST00000595255 PBRM1Q86U86 1689 aa27.53■■■□□ 2
CEACAM3-204ENST00000595255 GRIN2BQ13224 1484 aa27.53■■■□□ 2
CEACAM3-204ENST00000595255 SYNJ2O15056 1496 aa27.5■■□□□ 1.99
CEACAM3-204ENST00000595255 CHMP7Q8WUX9 453 aaPredicted RBP27.47■■□□□ 1.99
CEACAM3-204ENST00000595255 ABCA5Q8WWZ7 1642 aa27.39■■□□□ 1.97
CEACAM3-204ENST00000595255 GAPVD1Q14C86 1478 aa27.36■■□□□ 1.97
CEACAM3-204ENST00000595255 ABCA10Q8WWZ4 1543 aa27.32■■□□□ 1.96
CEACAM3-204ENST00000595255 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
CEACAM3-204ENST00000595255 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
CEACAM3-204ENST00000595255 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
CEACAM3-204ENST00000595255 CEP170Q5SW79 1584 aa27.15■■□□□ 1.94
CEACAM3-204ENST00000595255 SHROOM2Q13796 1616 aa27.15■■□□□ 1.94
CEACAM3-204ENST00000595255 AEBP2Q6ZN18 517 aaPredicted RBP27.13■■□□□ 1.93
CEACAM3-204ENST00000595255 NUP160Q12769 1436 aa27.12■■□□□ 1.93
CEACAM3-204ENST00000595255 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
CEACAM3-204ENST00000595255 WRNQ14191 1432 aaPredicted RBP eCLIP27.06■■□□□ 1.92
CEACAM3-204ENST00000595255 TOP2BQ02880 1626 aa27.06■■□□□ 1.92
CEACAM3-204ENST00000595255 KIF13AQ9H1H9 1805 aa27.05■■□□□ 1.92
CEACAM3-204ENST00000595255 FHAD1B1AJZ9 1412 aa27■■□□□ 1.91
CEACAM3-204ENST00000595255 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
CEACAM3-204ENST00000595255 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.89
CEACAM3-204ENST00000595255 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
CEACAM3-204ENST00000595255 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms