RNA–Protein interactions for RNA: ENST00000594908.5

PLD3-217, Transcript of phospholipase D family member 3, humanhuman

TSL 3

Gene PLD3, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-217ENST00000594908 NISCHQ9Y2I1 1504 aa39.92■■■■□ 3.98
PLD3-217ENST00000594908 CCDC180Q9P1Z9 1646 aa35.9■■■■□ 3.34
PLD3-217ENST00000594908 ABCC9O60706 1549 aa35.59■■■■□ 3.29
PLD3-217ENST00000594908 RB1CC1Q8TDY2 1594 aa34.02■■■■□ 3.04
PLD3-217ENST00000594908 NACADO15069 1562 aa33.83■■■■□ 3.01
PLD3-217ENST00000594908 MYO15BQ96JP2 1530 aa33.46■■■□□ 2.95
PLD3-217ENST00000594908 UNC13AQ9UPW8 1703 aa33.38■■■□□ 2.93
PLD3-217ENST00000594908 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
PLD3-217ENST00000594908 DNAJC5BQ9UF47 199 aa33.28■■■□□ 2.92
PLD3-217ENST00000594908 ZCCHC6Q5VYS8 1495 aaKnown RBP33.15■■■□□ 2.9
PLD3-217ENST00000594908 BICRAQ9NZM4 1560 aa33.09■■■□□ 2.89
PLD3-217ENST00000594908 PABPN1Q86U42 306 aaKnown RBP eCLIP33.06■■■□□ 2.88
PLD3-217ENST00000594908 DCAF1Q9Y4B6 1507 aa33.06■■■□□ 2.88
PLD3-217ENST00000594908 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
PLD3-217ENST00000594908 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
PLD3-217ENST00000594908 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.75
PLD3-217ENST00000594908 EIF4G1Q04637 1599 aaKnown RBP32.23■■■□□ 2.75
PLD3-217ENST00000594908 CECR2Q9BXF3 1484 aa32.08■■■□□ 2.73
PLD3-217ENST00000594908 NCAPD3P42695 1498 aa31.21■■■□□ 2.59
PLD3-217ENST00000594908 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
PLD3-217ENST00000594908 ATAD2BQ9ULI0 1458 aa31.11■■■□□ 2.57
PLD3-217ENST00000594908 SMARCA2P51531 1590 aa31.05■■■□□ 2.56
PLD3-217ENST00000594908 HMGXB3Q12766 1538 aa31.04■■■□□ 2.56
PLD3-217ENST00000594908 BAZ1AQ9NRL2 1556 aaPredicted RBP30.99■■■□□ 2.55
PLD3-217ENST00000594908 PEG3Q9GZU2 1588 aa30.91■■■□□ 2.54
PLD3-217ENST00000594908 BAZ1BQ9UIG0 1483 aaKnown RBP30.78■■■□□ 2.52
PLD3-217ENST00000594908 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
PLD3-217ENST00000594908 CUX2O14529 1486 aa30.72■■■□□ 2.51
PLD3-217ENST00000594908 ERCC6Q03468 1493 aa30.7■■■□□ 2.5
PLD3-217ENST00000594908 NESP48681 1621 aa30.64■■■□□ 2.5
PLD3-217ENST00000594908 LAMC3Q9Y6N6 1575 aa30.52■■■□□ 2.48
PLD3-217ENST00000594908 DNAJC5Q9H3Z4 198 aa30.48■■■□□ 2.47
PLD3-217ENST00000594908 THOC2Q8NI27 1593 aaKnown RBP30.43■■■□□ 2.46
PLD3-217ENST00000594908 WIZO95785 1651 aa30.41■■■□□ 2.46
PLD3-217ENST00000594908 KIF21AQ7Z4S6 1674 aa30.36■■■□□ 2.45
PLD3-217ENST00000594908 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
PLD3-217ENST00000594908 CADPSQ9ULU8 1353 aa30.2■■■□□ 2.43
PLD3-217ENST00000594908 RSF1Q96T23 1441 aaPredicted RBP30.12■■■□□ 2.41
PLD3-217ENST00000594908 TOP2AP11388 1531 aaKnown RBP30.04■■■□□ 2.4
PLD3-217ENST00000594908 MRC2Q9UBG0 1479 aa30.02■■■□□ 2.4
PLD3-217ENST00000594908 WDR62O43379 1518 aa30.01■■■□□ 2.4
PLD3-217ENST00000594908 CFTRP13569 1480 aa29.93■■■□□ 2.38
PLD3-217ENST00000594908 CEP164Q9UPV0 1460 aa29.91■■■□□ 2.38
PLD3-217ENST00000594908 FANCD2Q9BXW9 1451 aa29.87■■■□□ 2.37
PLD3-217ENST00000594908 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
PLD3-217ENST00000594908 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
PLD3-217ENST00000594908 CCDC88BA6NC98 1476 aa29.63■■■□□ 2.33
PLD3-217ENST00000594908 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
PLD3-217ENST00000594908 IFT140Q96RY7 1462 aa29.31■■■□□ 2.28
PLD3-217ENST00000594908 ABCC8Q09428 1581 aa29.29■■■□□ 2.28
PLD3-217ENST00000594908 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
PLD3-217ENST00000594908 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
PLD3-217ENST00000594908 OSCARQ8IYS5 282 aa29.18■■■□□ 2.26
PLD3-217ENST00000594908 EIF4G3O43432 1585 aaKnown RBP29.17■■■□□ 2.26
PLD3-217ENST00000594908 TARBP1Q13395 1621 aaKnown RBP29.15■■■□□ 2.26
PLD3-217ENST00000594908 TRIM41Q8WV44 630 aa29.07■■■□□ 2.24
PLD3-217ENST00000594908 POLA1P09884 1462 aaPredicted RBP29.06■■■□□ 2.24
PLD3-217ENST00000594908 RIMBP3CA6NJZ7 1639 aa28.96■■■□□ 2.23
PLD3-217ENST00000594908 RIMBP3BA6NNM3 1639 aa28.96■■■□□ 2.23
PLD3-217ENST00000594908 RIMBP3Q9UFD9 1639 aa28.96■■■□□ 2.23
PLD3-217ENST00000594908 AQRO60306 1485 aaKnown RBP eCLIP28.95■■■□□ 2.222e-6■□□□□ 10.6
PLD3-217ENST00000594908 CHD1O14646 1710 aa28.94■■■□□ 2.22
PLD3-217ENST00000594908 WDR97A6NE52 1622 aa28.9■■■□□ 2.22
PLD3-217ENST00000594908 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
PLD3-217ENST00000594908 CUX1P39880 1505 aa28.89■■■□□ 2.22
PLD3-217ENST00000594908 FGD5Q6ZNL6 1462 aa28.87■■■□□ 2.21
PLD3-217ENST00000594908 ARHGEF11O15085 1522 aa28.85■■■□□ 2.21
PLD3-217ENST00000594908 SOGA1O94964 1423 aa28.84■■■□□ 2.21
PLD3-217ENST00000594908 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
PLD3-217ENST00000594908 SNAPC4Q5SXM2 1469 aa28.71■■■□□ 2.19
PLD3-217ENST00000594908 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
PLD3-217ENST00000594908 PBRM1Q86U86 1689 aa28.64■■■□□ 2.18
PLD3-217ENST00000594908 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
PLD3-217ENST00000594908 GRIN2BQ13224 1484 aa28.63■■■□□ 2.17
PLD3-217ENST00000594908 CLASP1Q7Z460 1538 aa28.62■■■□□ 2.17
PLD3-217ENST00000594908 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
PLD3-217ENST00000594908 FBLN2P98095 1184 aa28.59■■■□□ 2.17
PLD3-217ENST00000594908 ABCA10Q8WWZ4 1543 aa28.59■■■□□ 2.17
PLD3-217ENST00000594908 ARAP1Q96P48 1450 aa28.57■■■□□ 2.16
PLD3-217ENST00000594908 SYNJ1O43426 1573 aa28.55■■■□□ 2.16
PLD3-217ENST00000594908 SYNJ2O15056 1496 aa28.55■■■□□ 2.16
PLD3-217ENST00000594908 GAPVD1Q14C86 1478 aa28.54■■■□□ 2.16
PLD3-217ENST00000594908 BIVM-ERCC5R4GMW8 1640 aa28.53■■■□□ 2.16
PLD3-217ENST00000594908 TOP2BQ02880 1626 aa28.49■■■□□ 2.15
PLD3-217ENST00000594908 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
PLD3-217ENST00000594908 CHMP7Q8WUX9 453 aaPredicted RBP28.45■■■□□ 2.14
PLD3-217ENST00000594908 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
PLD3-217ENST00000594908 ADAMTS12P58397 1594 aa28.35■■■□□ 2.13
PLD3-217ENST00000594908 GRIN2AQ12879 1464 aa28.29■■■□□ 2.12
PLD3-217ENST00000594908 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
PLD3-217ENST00000594908 NUP160Q12769 1436 aa28.22■■■□□ 2.11
PLD3-217ENST00000594908 CEP170Q5SW79 1584 aa28.22■■■□□ 2.11
PLD3-217ENST00000594908 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
PLD3-217ENST00000594908 SHROOM2Q13796 1616 aa28.15■■■□□ 2.1
PLD3-217ENST00000594908 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
PLD3-217ENST00000594908 TRHP20396 242 aaPredicted RBP28.06■■■□□ 2.08
PLD3-217ENST00000594908 RUSC2Q8N2Y8 1516 aa27.97■■■□□ 2.07
PLD3-217ENST00000594908 CUL7Q14999 1698 aa27.87■■■□□ 2.05
PLD3-217ENST00000594908 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
PLD3-217ENST00000594908 KIF27Q86VH2 1401 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms