RNA–Protein interactions for RNA: ENST00000594703.1

GTPBP3-207, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-207ENST00000594703 NISCHQ9Y2I1 1504 aa35.39■■■■□ 3.26
GTPBP3-207ENST00000594703 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.63
GTPBP3-207ENST00000594703 ABCC9O60706 1549 aa31.47■■■□□ 2.63
GTPBP3-207ENST00000594703 DNAJC5BQ9UF47 199 aa30.18■■■□□ 2.42
GTPBP3-207ENST00000594703 RB1CC1Q8TDY2 1594 aa29.83■■■□□ 2.37
GTPBP3-207ENST00000594703 NACADO15069 1562 aa29.77■■■□□ 2.36
GTPBP3-207ENST00000594703 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
GTPBP3-207ENST00000594703 MYO15BQ96JP2 1530 aa29.56■■■□□ 2.32
GTPBP3-207ENST00000594703 ZCCHC6Q5VYS8 1495 aaKnown RBP29.4■■■□□ 2.3
GTPBP3-207ENST00000594703 DCAF1Q9Y4B6 1507 aa29.31■■■□□ 2.28
GTPBP3-207ENST00000594703 PABPN1Q86U42 306 aaKnown RBP eCLIP29.31■■■□□ 2.28
GTPBP3-207ENST00000594703 UNC13AQ9UPW8 1703 aa29.07■■■□□ 2.24
GTPBP3-207ENST00000594703 BICRAQ9NZM4 1560 aa28.98■■■□□ 2.23
GTPBP3-207ENST00000594703 SCRIBQ14160 1630 aa28.69■■■□□ 2.18
GTPBP3-207ENST00000594703 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
GTPBP3-207ENST00000594703 CECR2Q9BXF3 1484 aa28.45■■■□□ 2.14
GTPBP3-207ENST00000594703 CC2D2AQ9P2K1 1620 aa28.33■■■□□ 2.13
GTPBP3-207ENST00000594703 EIF4G1Q04637 1599 aaKnown RBP28.21■■■□□ 2.11
GTPBP3-207ENST00000594703 DNAJC5Q9H3Z4 198 aa28.21■■■□□ 2.11
GTPBP3-207ENST00000594703 NCAPD3P42695 1498 aa27.54■■■□□ 2
GTPBP3-207ENST00000594703 ATAD2BQ9ULI0 1458 aa27.47■■□□□ 1.99
GTPBP3-207ENST00000594703 SMARCA4P51532 1647 aa27.46■■□□□ 1.99
GTPBP3-207ENST00000594703 BAZ1AQ9NRL2 1556 aaPredicted RBP27.43■■□□□ 1.98
GTPBP3-207ENST00000594703 CUX2O14529 1486 aa27.4■■□□□ 1.98
GTPBP3-207ENST00000594703 SMARCA2P51531 1590 aa27.36■■□□□ 1.97
GTPBP3-207ENST00000594703 HMGXB3Q12766 1538 aa27.29■■□□□ 1.96
GTPBP3-207ENST00000594703 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
GTPBP3-207ENST00000594703 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
GTPBP3-207ENST00000594703 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
GTPBP3-207ENST00000594703 BAZ1BQ9UIG0 1483 aaKnown RBP27.16■■□□□ 1.94
GTPBP3-207ENST00000594703 WIZO95785 1651 aa26.89■■□□□ 1.89
GTPBP3-207ENST00000594703 NESP48681 1621 aa26.88■■□□□ 1.89
GTPBP3-207ENST00000594703 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
GTPBP3-207ENST00000594703 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
GTPBP3-207ENST00000594703 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
GTPBP3-207ENST00000594703 TRIM41Q8WV44 630 aa26.65■■□□□ 1.86
GTPBP3-207ENST00000594703 PDS5BQ9NTI5 1447 aa26.64■■□□□ 1.85
GTPBP3-207ENST00000594703 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
GTPBP3-207ENST00000594703 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
GTPBP3-207ENST00000594703 CFTRP13569 1480 aa26.48■■□□□ 1.83
GTPBP3-207ENST00000594703 KIF21AQ7Z4S6 1674 aa26.46■■□□□ 1.83
GTPBP3-207ENST00000594703 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
GTPBP3-207ENST00000594703 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
GTPBP3-207ENST00000594703 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
GTPBP3-207ENST00000594703 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
GTPBP3-207ENST00000594703 WDR62O43379 1518 aa26.27■■□□□ 1.8
GTPBP3-207ENST00000594703 OSCARQ8IYS5 282 aa26.19■■□□□ 1.78
GTPBP3-207ENST00000594703 URB2Q14146 1524 aaKnown RBP26.1■■□□□ 1.77
GTPBP3-207ENST00000594703 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
GTPBP3-207ENST00000594703 SUPT5HO00267 1087 aaKnown RBP25.91■■□□□ 1.74
GTPBP3-207ENST00000594703 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
GTPBP3-207ENST00000594703 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
GTPBP3-207ENST00000594703 IFT140Q96RY7 1462 aa25.8■■□□□ 1.72
GTPBP3-207ENST00000594703 DNMBPQ6XZF7 1577 aa25.79■■□□□ 1.72
GTPBP3-207ENST00000594703 ZNF608Q9ULD9 1512 aaPredicted RBP25.71■■□□□ 1.71
GTPBP3-207ENST00000594703 RIMBP3CA6NJZ7 1639 aa25.67■■□□□ 1.7
GTPBP3-207ENST00000594703 RIMBP3BA6NNM3 1639 aa25.67■■□□□ 1.7
GTPBP3-207ENST00000594703 RIMBP3Q9UFD9 1639 aa25.67■■□□□ 1.7
GTPBP3-207ENST00000594703 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
GTPBP3-207ENST00000594703 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
GTPBP3-207ENST00000594703 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
GTPBP3-207ENST00000594703 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
GTPBP3-207ENST00000594703 CUX1P39880 1505 aa25.57■■□□□ 1.68
GTPBP3-207ENST00000594703 SOGA1O94964 1423 aa25.56■■□□□ 1.68
GTPBP3-207ENST00000594703 AQRO60306 1485 aaKnown RBP eCLIP25.54■■□□□ 1.681e-7■■■■■ 35.8
GTPBP3-207ENST00000594703 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
GTPBP3-207ENST00000594703 FGD5Q6ZNL6 1462 aa25.52■■□□□ 1.68
GTPBP3-207ENST00000594703 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
GTPBP3-207ENST00000594703 TRHP20396 242 aaPredicted RBP25.5■■□□□ 1.67
GTPBP3-207ENST00000594703 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
GTPBP3-207ENST00000594703 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
GTPBP3-207ENST00000594703 FBLN2P98095 1184 aa25.32■■□□□ 1.64
GTPBP3-207ENST00000594703 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
GTPBP3-207ENST00000594703 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
GTPBP3-207ENST00000594703 ABCA10Q8WWZ4 1543 aa25.3■■□□□ 1.64
GTPBP3-207ENST00000594703 GRIN2BQ13224 1484 aa25.28■■□□□ 1.64
GTPBP3-207ENST00000594703 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
GTPBP3-207ENST00000594703 SNAPC4Q5SXM2 1469 aa25.24■■□□□ 1.63
GTPBP3-207ENST00000594703 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
GTPBP3-207ENST00000594703 MAGI1Q96QZ7 1491 aaPredicted RBP25.23■■□□□ 1.63
GTPBP3-207ENST00000594703 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
GTPBP3-207ENST00000594703 SYNJ1O43426 1573 aa25.22■■□□□ 1.63
GTPBP3-207ENST00000594703 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
GTPBP3-207ENST00000594703 CHD1O14646 1710 aa25.2■■□□□ 1.63
GTPBP3-207ENST00000594703 CHMP7Q8WUX9 453 aaPredicted RBP25.18■■□□□ 1.62
GTPBP3-207ENST00000594703 ABCA5Q8WWZ7 1642 aa25.16■■□□□ 1.62
GTPBP3-207ENST00000594703 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
GTPBP3-207ENST00000594703 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
GTPBP3-207ENST00000594703 CLASP1Q7Z460 1538 aa25.04■■□□□ 1.6
GTPBP3-207ENST00000594703 ERICH3Q5RHP9 1530 aa24.97■■□□□ 1.59
GTPBP3-207ENST00000594703 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.59
GTPBP3-207ENST00000594703 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
GTPBP3-207ENST00000594703 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
GTPBP3-207ENST00000594703 NUP160Q12769 1436 aa24.88■■□□□ 1.57
GTPBP3-207ENST00000594703 IGF1RP08069 1367 aa24.82■■□□□ 1.56
GTPBP3-207ENST00000594703 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
GTPBP3-207ENST00000594703 KIF27Q86VH2 1401 aa24.8■■□□□ 1.56
GTPBP3-207ENST00000594703 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
GTPBP3-207ENST00000594703 JPH4Q96JJ6 628 aa24.67■■□□□ 1.54
GTPBP3-207ENST00000594703 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms