RNA–Protein interactions for RNA: ENST00000594670.1

NPAS1-204, Transcript of neuronal PAS domain protein 1, humanhuman

TSL 5

Gene NPAS1, Length 763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-204ENST00000594670 NISCHQ9Y2I1 1504 aa43.13■■■■■ 4.5
NPAS1-204ENST00000594670 ABCC9O60706 1549 aa38.64■■■■□ 3.78
NPAS1-204ENST00000594670 CCDC180Q9P1Z9 1646 aa38.61■■■■□ 3.77
NPAS1-204ENST00000594670 RB1CC1Q8TDY2 1594 aa36.74■■■■□ 3.47
NPAS1-204ENST00000594670 NACADO15069 1562 aa36.52■■■■□ 3.44
NPAS1-204ENST00000594670 DCAF8L2P0C7V8 631 aa36.37■■■■□ 3.41
NPAS1-204ENST00000594670 DNAJC5BQ9UF47 199 aa36.3■■■■□ 3.4
NPAS1-204ENST00000594670 MYO15BQ96JP2 1530 aa36.04■■■■□ 3.36
NPAS1-204ENST00000594670 PABPN1Q86U42 306 aaKnown RBP eCLIP36.02■■■■□ 3.36
NPAS1-204ENST00000594670 UNC13AQ9UPW8 1703 aa35.96■■■■□ 3.35
NPAS1-204ENST00000594670 ZCCHC6Q5VYS8 1495 aaKnown RBP35.76■■■■□ 3.32
NPAS1-204ENST00000594670 BICRAQ9NZM4 1560 aa35.76■■■■□ 3.31
NPAS1-204ENST00000594670 DCAF1Q9Y4B6 1507 aa35.61■■■■□ 3.29
NPAS1-204ENST00000594670 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
NPAS1-204ENST00000594670 SHROOM4Q9ULL8 1493 aa35.18■■■■□ 3.22
NPAS1-204ENST00000594670 CC2D2AQ9P2K1 1620 aa34.89■■■■□ 3.18
NPAS1-204ENST00000594670 EIF4G1Q04637 1599 aaKnown RBP34.83■■■■□ 3.17
NPAS1-204ENST00000594670 CECR2Q9BXF3 1484 aa34.78■■■■□ 3.16
NPAS1-204ENST00000594670 NCAPD3P42695 1498 aa33.76■■■□□ 2.99
NPAS1-204ENST00000594670 ATAD2BQ9ULI0 1458 aa33.67■■■□□ 2.98
NPAS1-204ENST00000594670 SMARCA4P51532 1647 aa33.62■■■□□ 2.97
NPAS1-204ENST00000594670 SMARCA2P51531 1590 aa33.51■■■□□ 2.96
NPAS1-204ENST00000594670 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
NPAS1-204ENST00000594670 BAZ1AQ9NRL2 1556 aaPredicted RBP33.44■■■□□ 2.94
NPAS1-204ENST00000594670 BAZ1BQ9UIG0 1483 aaKnown RBP33.31■■■□□ 2.92
NPAS1-204ENST00000594670 PEG3Q9GZU2 1588 aa33.3■■■□□ 2.92
NPAS1-204ENST00000594670 ERCC6Q03468 1493 aa33.3■■■□□ 2.92
NPAS1-204ENST00000594670 MROH2BQ7Z745 1585 aa33.27■■■□□ 2.92
NPAS1-204ENST00000594670 NESP48681 1621 aa33.24■■■□□ 2.91
NPAS1-204ENST00000594670 CUX2O14529 1486 aa33.23■■■□□ 2.91
NPAS1-204ENST00000594670 DNAJC5Q9H3Z4 198 aa33.22■■■□□ 2.91
NPAS1-204ENST00000594670 LAMC3Q9Y6N6 1575 aa32.94■■■□□ 2.86
NPAS1-204ENST00000594670 THOC2Q8NI27 1593 aaKnown RBP32.85■■■□□ 2.85
NPAS1-204ENST00000594670 WIZO95785 1651 aa32.85■■■□□ 2.85
NPAS1-204ENST00000594670 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
NPAS1-204ENST00000594670 PDS5BQ9NTI5 1447 aa32.75■■■□□ 2.83
NPAS1-204ENST00000594670 CADPSQ9ULU8 1353 aa32.73■■■□□ 2.83
NPAS1-204ENST00000594670 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
NPAS1-204ENST00000594670 MRC2Q9UBG0 1479 aa32.48■■■□□ 2.79
NPAS1-204ENST00000594670 WDR62O43379 1518 aa32.41■■■□□ 2.78
NPAS1-204ENST00000594670 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
NPAS1-204ENST00000594670 CFTRP13569 1480 aa32.37■■■□□ 2.77
NPAS1-204ENST00000594670 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
NPAS1-204ENST00000594670 CEP164Q9UPV0 1460 aa32.35■■■□□ 2.77
NPAS1-204ENST00000594670 URB2Q14146 1524 aaKnown RBP32.11■■■□□ 2.73
NPAS1-204ENST00000594670 CCDC88BA6NC98 1476 aa32.08■■■□□ 2.73
NPAS1-204ENST00000594670 PRDM2Q13029 1718 aa31.97■■■□□ 2.71
NPAS1-204ENST00000594670 TRIM41Q8WV44 630 aa31.76■■■□□ 2.67
NPAS1-204ENST00000594670 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
NPAS1-204ENST00000594670 OSCARQ8IYS5 282 aa31.75■■■□□ 2.67
NPAS1-204ENST00000594670 ZNF608Q9ULD9 1512 aaPredicted RBP31.72■■■□□ 2.67
NPAS1-204ENST00000594670 IFT140Q96RY7 1462 aa31.71■■■□□ 2.67
NPAS1-204ENST00000594670 ABCC8Q09428 1581 aa31.62■■■□□ 2.65
NPAS1-204ENST00000594670 DNMBPQ6XZF7 1577 aa31.61■■■□□ 2.65
NPAS1-204ENST00000594670 EIF4G3O43432 1585 aaKnown RBP31.49■■■□□ 2.63
NPAS1-204ENST00000594670 TARBP1Q13395 1621 aaKnown RBP31.47■■■□□ 2.63
NPAS1-204ENST00000594670 POLA1P09884 1462 aaPredicted RBP31.44■■■□□ 2.62
NPAS1-204ENST00000594670 AQRO60306 1485 aaKnown RBP eCLIP31.43■■■□□ 2.62
NPAS1-204ENST00000594670 RAD54L2Q9Y4B4 1467 aa31.34■■■□□ 2.61
NPAS1-204ENST00000594670 RIMBP3CA6NJZ7 1639 aa31.34■■■□□ 2.61
NPAS1-204ENST00000594670 RIMBP3BA6NNM3 1639 aa31.34■■■□□ 2.61
NPAS1-204ENST00000594670 RIMBP3Q9UFD9 1639 aa31.34■■■□□ 2.61
NPAS1-204ENST00000594670 SOGA1O94964 1423 aa31.28■■■□□ 2.6
NPAS1-204ENST00000594670 ARHGEF11O15085 1522 aa31.25■■■□□ 2.59
NPAS1-204ENST00000594670 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
NPAS1-204ENST00000594670 CUX1P39880 1505 aa31.24■■■□□ 2.59
NPAS1-204ENST00000594670 FGD5Q6ZNL6 1462 aa31.24■■■□□ 2.59
NPAS1-204ENST00000594670 CHD1O14646 1710 aa31.24■■■□□ 2.59
NPAS1-204ENST00000594670 SUPT5HO00267 1087 aaKnown RBP31.17■■■□□ 2.58
NPAS1-204ENST00000594670 FBLN2P98095 1184 aa31.16■■■□□ 2.58
NPAS1-204ENST00000594670 SNAPC4Q5SXM2 1469 aa31.08■■■□□ 2.57
NPAS1-204ENST00000594670 WDR97A6NE52 1622 aa31.07■■■□□ 2.56
NPAS1-204ENST00000594670 CYB5RLQ6IPT4 315 aa31.03■■■□□ 2.56
NPAS1-204ENST00000594670 GRIN2BQ13224 1484 aa30.98■■■□□ 2.55
NPAS1-204ENST00000594670 ARAP1Q96P48 1450 aa30.97■■■□□ 2.55
NPAS1-204ENST00000594670 MAGI1Q96QZ7 1491 aaPredicted RBP30.97■■■□□ 2.55
NPAS1-204ENST00000594670 CHMP7Q8WUX9 453 aaPredicted RBP30.94■■■□□ 2.54
NPAS1-204ENST00000594670 CLASP1Q7Z460 1538 aa30.91■■■□□ 2.54
NPAS1-204ENST00000594670 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.54
NPAS1-204ENST00000594670 ABCA10Q8WWZ4 1543 aa30.88■■■□□ 2.53
NPAS1-204ENST00000594670 SYNJ2O15056 1496 aa30.88■■■□□ 2.53
NPAS1-204ENST00000594670 PBRM1Q86U86 1689 aa30.84■■■□□ 2.53
NPAS1-204ENST00000594670 SYNJ1O43426 1573 aa30.84■■■□□ 2.53
NPAS1-204ENST00000594670 ABCA5Q8WWZ7 1642 aa30.83■■■□□ 2.53
NPAS1-204ENST00000594670 WRNQ14191 1432 aaPredicted RBP eCLIP30.74■■■□□ 2.51
NPAS1-204ENST00000594670 TOP2BQ02880 1626 aa30.72■■■□□ 2.51
NPAS1-204ENST00000594670 BIVM-ERCC5R4GMW8 1640 aa30.71■■■□□ 2.51
NPAS1-204ENST00000594670 TRHP20396 242 aaPredicted RBP30.62■■■□□ 2.49
NPAS1-204ENST00000594670 GRIN2AQ12879 1464 aa30.6■■■□□ 2.49
NPAS1-204ENST00000594670 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
NPAS1-204ENST00000594670 NUP160Q12769 1436 aa30.52■■■□□ 2.48
NPAS1-204ENST00000594670 CEP170Q5SW79 1584 aa30.51■■■□□ 2.47
NPAS1-204ENST00000594670 FHAD1B1AJZ9 1412 aa30.5■■■□□ 2.47
NPAS1-204ENST00000594670 ERCC6L2Q5T890 1561 aa30.49■■■□□ 2.47
NPAS1-204ENST00000594670 ERICH3Q5RHP9 1530 aa30.47■■■□□ 2.47
NPAS1-204ENST00000594670 SHROOM2Q13796 1616 aa30.36■■■□□ 2.45
NPAS1-204ENST00000594670 PRG4Q92954 1404 aaPredicted RBP30.21■■■□□ 2.43
NPAS1-204ENST00000594670 JPH4Q96JJ6 628 aa30.2■■■□□ 2.43
NPAS1-204ENST00000594670 RUSC2Q8N2Y8 1516 aa30.16■■■□□ 2.42
NPAS1-204ENST00000594670 IGF1RP08069 1367 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms