RNA–Protein interactions for RNA: ENST00000594411.1

ARRDC2-205, Transcript of arrestin domain containing 2, humanhuman

TSL 4

Gene ARRDC2, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC2-205ENST00000594411 NISCHQ9Y2I1 1504 aa65.05■■■■■ 8
ARRDC2-205ENST00000594411 CCDC180Q9P1Z9 1646 aa58.01■■■■■ 6.88
ARRDC2-205ENST00000594411 ABCC9O60706 1549 aa57.42■■■■■ 6.78
ARRDC2-205ENST00000594411 RB1CC1Q8TDY2 1594 aa54.94■■■■■ 6.39
ARRDC2-205ENST00000594411 NACADO15069 1562 aa54.76■■■■■ 6.36
ARRDC2-205ENST00000594411 DCAF8L2P0C7V8 631 aa54.66■■■■■ 6.34
ARRDC2-205ENST00000594411 MYO15BQ96JP2 1530 aa54.27■■■■■ 6.28
ARRDC2-205ENST00000594411 ZCCHC6Q5VYS8 1495 aaKnown RBP54.03■■■■■ 6.24
ARRDC2-205ENST00000594411 DCAF1Q9Y4B6 1507 aa53.8■■■■■ 6.2
ARRDC2-205ENST00000594411 UNC13AQ9UPW8 1703 aa53.63■■■■■ 6.18
ARRDC2-205ENST00000594411 PABPN1Q86U42 306 aaKnown RBP eCLIP53.62■■■■■ 6.17
ARRDC2-205ENST00000594411 DNAJC5BQ9UF47 199 aa53.38■■■■■ 6.14
ARRDC2-205ENST00000594411 BICRAQ9NZM4 1560 aa53.32■■■■■ 6.13
ARRDC2-205ENST00000594411 SCRIBQ14160 1630 aa52.88■■■■■ 6.06
ARRDC2-205ENST00000594411 SHROOM4Q9ULL8 1493 aa52.7■■■■■ 6.03
ARRDC2-205ENST00000594411 EIF4G1Q04637 1599 aaKnown RBP51.96■■■■■ 5.91
ARRDC2-205ENST00000594411 CC2D2AQ9P2K1 1620 aa51.89■■■■■ 5.9
ARRDC2-205ENST00000594411 CECR2Q9BXF3 1484 aa51.67■■■■■ 5.86
ARRDC2-205ENST00000594411 NCAPD3P42695 1498 aa50.59■■■■■ 5.69
ARRDC2-205ENST00000594411 SMARCA4P51532 1647 aa50.55■■■■■ 5.68
ARRDC2-205ENST00000594411 ATAD2BQ9ULI0 1458 aa50.51■■■■■ 5.68
ARRDC2-205ENST00000594411 BAZ1AQ9NRL2 1556 aaPredicted RBP50.43■■■■■ 5.66
ARRDC2-205ENST00000594411 SMARCA2P51531 1590 aa50.37■■■■■ 5.65
ARRDC2-205ENST00000594411 HMGXB3Q12766 1538 aa50.21■■■■■ 5.63
ARRDC2-205ENST00000594411 MROH2BQ7Z745 1585 aa50.12■■■■■ 5.61
ARRDC2-205ENST00000594411 PEG3Q9GZU2 1588 aa50.11■■■■■ 5.61
ARRDC2-205ENST00000594411 BAZ1BQ9UIG0 1483 aaKnown RBP50.01■■■■■ 5.6
ARRDC2-205ENST00000594411 ERCC6Q03468 1493 aa49.52■■■■■ 5.52
ARRDC2-205ENST00000594411 NESP48681 1621 aa49.52■■■■■ 5.52
ARRDC2-205ENST00000594411 WIZO95785 1651 aa49.51■■■■■ 5.52
ARRDC2-205ENST00000594411 RSF1Q96T23 1441 aaPredicted RBP49.36■■■■■ 5.49
ARRDC2-205ENST00000594411 LAMC3Q9Y6N6 1575 aa49.28■■■■■ 5.48
ARRDC2-205ENST00000594411 CUX2O14529 1486 aa49.25■■■■■ 5.47
ARRDC2-205ENST00000594411 CADPSQ9ULU8 1353 aa49.09■■■■■ 5.45
ARRDC2-205ENST00000594411 PDS5BQ9NTI5 1447 aa49.02■■■■■ 5.44
ARRDC2-205ENST00000594411 TOP2AP11388 1531 aaKnown RBP48.95■■■■■ 5.43
ARRDC2-205ENST00000594411 THOC2Q8NI27 1593 aaKnown RBP48.84■■■■■ 5.41
ARRDC2-205ENST00000594411 KIF21AQ7Z4S6 1674 aa48.83■■■■■ 5.41
ARRDC2-205ENST00000594411 CFTRP13569 1480 aa48.65■■■■■ 5.38
ARRDC2-205ENST00000594411 DNAJC5Q9H3Z4 198 aa48.56■■■■■ 5.36
ARRDC2-205ENST00000594411 MRC2Q9UBG0 1479 aa48.52■■■■■ 5.36
ARRDC2-205ENST00000594411 FANCD2Q9BXW9 1451 aa48.48■■■■■ 5.35
ARRDC2-205ENST00000594411 CEP164Q9UPV0 1460 aa48.45■■■■■ 5.35
ARRDC2-205ENST00000594411 CCDC88BA6NC98 1476 aa48.44■■■■■ 5.35
ARRDC2-205ENST00000594411 WDR62O43379 1518 aa48.37■■■■■ 5.33
ARRDC2-205ENST00000594411 PRDM2Q13029 1718 aa48.08■■■■■ 5.29
ARRDC2-205ENST00000594411 URB2Q14146 1524 aaKnown RBP48.03■■■■■ 5.28
ARRDC2-205ENST00000594411 SUPT5HO00267 1087 aaKnown RBP47.67■■■■■ 5.22
ARRDC2-205ENST00000594411 TOPBP1Q92547 1522 aa47.63■■■■■ 5.22
ARRDC2-205ENST00000594411 ABCC8Q09428 1581 aa47.62■■■■■ 5.21
ARRDC2-205ENST00000594411 DNMBPQ6XZF7 1577 aa47.49■■■■■ 5.19
ARRDC2-205ENST00000594411 IFT140Q96RY7 1462 aa47.49■■■■■ 5.19
ARRDC2-205ENST00000594411 ZNF608Q9ULD9 1512 aaPredicted RBP47.33■■■■■ 5.17
ARRDC2-205ENST00000594411 OSCARQ8IYS5 282 aa47.19■■■■■ 5.14
ARRDC2-205ENST00000594411 POLA1P09884 1462 aaPredicted RBP47.19■■■■■ 5.14
ARRDC2-205ENST00000594411 TARBP1Q13395 1621 aaKnown RBP47.14■■■■■ 5.14
ARRDC2-205ENST00000594411 CUX1P39880 1505 aa47.05■■■■■ 5.12
ARRDC2-205ENST00000594411 EIF4G3O43432 1585 aaKnown RBP47.03■■■■■ 5.12
ARRDC2-205ENST00000594411 SOGA1O94964 1423 aa47.03■■■■■ 5.12
ARRDC2-205ENST00000594411 AQRO60306 1485 aaKnown RBP eCLIP47.02■■■■■ 5.12
ARRDC2-205ENST00000594411 RAD54L2Q9Y4B4 1467 aa47.01■■■■■ 5.12
ARRDC2-205ENST00000594411 FGD5Q6ZNL6 1462 aa46.97■■■■■ 5.11
ARRDC2-205ENST00000594411 TDRD9Q8NDG6 1382 aaKnown RBP46.85■■■■■ 5.09
ARRDC2-205ENST00000594411 WDR97A6NE52 1622 aa46.71■■■■■ 5.07
ARRDC2-205ENST00000594411 TRIM41Q8WV44 630 aa46.62■■■■■ 5.05
ARRDC2-205ENST00000594411 FBLN2P98095 1184 aa46.58■■■■■ 5.05
ARRDC2-205ENST00000594411 CHD1O14646 1710 aa46.55■■■■■ 5.04
ARRDC2-205ENST00000594411 WRNQ14191 1432 aaPredicted RBP eCLIP46.54■■■■■ 5.04
ARRDC2-205ENST00000594411 GRIN2BQ13224 1484 aa46.51■■■■■ 5.04
ARRDC2-205ENST00000594411 ABCA10Q8WWZ4 1543 aa46.51■■■■■ 5.04
ARRDC2-205ENST00000594411 SNAPC4Q5SXM2 1469 aa46.51■■■■■ 5.04
ARRDC2-205ENST00000594411 TOP2BQ02880 1626 aa46.46■■■■■ 5.03
ARRDC2-205ENST00000594411 GAPVD1Q14C86 1478 aa46.44■■■■■ 5.03
ARRDC2-205ENST00000594411 MAGI1Q96QZ7 1491 aaPredicted RBP46.44■■■■■ 5.03
ARRDC2-205ENST00000594411 BIVM-ERCC5R4GMW8 1640 aa46.43■■■■■ 5.02
ARRDC2-205ENST00000594411 SYNJ1O43426 1573 aa46.4■■■■■ 5.02
ARRDC2-205ENST00000594411 CHMP7Q8WUX9 453 aaPredicted RBP46.38■■■■■ 5.02
ARRDC2-205ENST00000594411 RIMBP3CA6NJZ7 1639 aa46.36■■■■■ 5.01
ARRDC2-205ENST00000594411 RIMBP3BA6NNM3 1639 aa46.36■■■■■ 5.01
ARRDC2-205ENST00000594411 RIMBP3Q9UFD9 1639 aa46.36■■■■■ 5.01
ARRDC2-205ENST00000594411 ARHGEF11O15085 1522 aa46.32■■■■■ 5.01
ARRDC2-205ENST00000594411 ABCA5Q8WWZ7 1642 aa46.32■■■■■ 5
ARRDC2-205ENST00000594411 SYNJ2O15056 1496 aa46.29■■■■■ 5
ARRDC2-205ENST00000594411 PBRM1Q86U86 1689 aa46.27■■■■■ 5
ARRDC2-205ENST00000594411 CLASP1Q7Z460 1538 aa46.09■■■■■ 4.97
ARRDC2-205ENST00000594411 CYB5RLQ6IPT4 315 aa46.01■■■■■ 4.96
ARRDC2-205ENST00000594411 ERICH3Q5RHP9 1530 aa45.93■■■■■ 4.94
ARRDC2-205ENST00000594411 ARAP1Q96P48 1450 aa45.92■■■■■ 4.94
ARRDC2-205ENST00000594411 ADAMTS12P58397 1594 aa45.91■■■■■ 4.94
ARRDC2-205ENST00000594411 FHAD1B1AJZ9 1412 aa45.9■■■■■ 4.94
ARRDC2-205ENST00000594411 GRIN2AQ12879 1464 aa45.9■■■■■ 4.94
ARRDC2-205ENST00000594411 NUP160Q12769 1436 aa45.76■■■■■ 4.92
ARRDC2-205ENST00000594411 CEP170Q5SW79 1584 aa45.67■■■■■ 4.9
ARRDC2-205ENST00000594411 KIF27Q86VH2 1401 aa45.61■■■■■ 4.89
ARRDC2-205ENST00000594411 IGF1RP08069 1367 aa45.58■■■■■ 4.89
ARRDC2-205ENST00000594411 SHROOM2Q13796 1616 aa45.43■■■■■ 4.86
ARRDC2-205ENST00000594411 ERCC6L2Q5T890 1561 aa45.41■■■■■ 4.86
ARRDC2-205ENST00000594411 JPH4Q96JJ6 628 aa45.36■■■■■ 4.85
ARRDC2-205ENST00000594411 CUL7Q14999 1698 aa45.34■■■■■ 4.85
ARRDC2-205ENST00000594411 CARMIL1Q5VZK9 1371 aa45.26■■■■■ 4.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms