RNA–Protein interactions for RNA: ENST00000594320.1

PCBP3-218, Transcript of poly(rC) binding protein 3, humanhuman

TSL 5

Gene PCBP3, Length 686 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-218ENST00000594320 NISCHQ9Y2I1 1504 aa29.62■■■□□ 2.33
PCBP3-218ENST00000594320 ABCC9O60706 1549 aa27.06■■□□□ 1.92
PCBP3-218ENST00000594320 CCDC180Q9P1Z9 1646 aa26.79■■□□□ 1.88
PCBP3-218ENST00000594320 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
PCBP3-218ENST00000594320 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
PCBP3-218ENST00000594320 NACADO15069 1562 aa25.35■■□□□ 1.65
PCBP3-218ENST00000594320 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
PCBP3-218ENST00000594320 UNC13AQ9UPW8 1703 aa25.13■■□□□ 1.61
PCBP3-218ENST00000594320 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
PCBP3-218ENST00000594320 BICRAQ9NZM4 1560 aa24.86■■□□□ 1.57
PCBP3-218ENST00000594320 MYO15BQ96JP2 1530 aa24.84■■□□□ 1.57
PCBP3-218ENST00000594320 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
PCBP3-218ENST00000594320 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.51
PCBP3-218ENST00000594320 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
PCBP3-218ENST00000594320 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
PCBP3-218ENST00000594320 SCRIBQ14160 1630 aa24.41■■□□□ 1.5
PCBP3-218ENST00000594320 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
PCBP3-218ENST00000594320 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
PCBP3-218ENST00000594320 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
PCBP3-218ENST00000594320 CUX2O14529 1486 aa23.42■■□□□ 1.34
PCBP3-218ENST00000594320 ERCC6Q03468 1493 aa23.41■■□□□ 1.34
PCBP3-218ENST00000594320 NCAPD3P42695 1498 aa23.35■■□□□ 1.33
PCBP3-218ENST00000594320 ATAD2BQ9ULI0 1458 aa23.26■■□□□ 1.31
PCBP3-218ENST00000594320 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
PCBP3-218ENST00000594320 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
PCBP3-218ENST00000594320 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
PCBP3-218ENST00000594320 NESP48681 1621 aa23.15■■□□□ 1.3
PCBP3-218ENST00000594320 BAZ1BQ9UIG0 1483 aaKnown RBP23.06■■□□□ 1.28
PCBP3-218ENST00000594320 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
PCBP3-218ENST00000594320 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
PCBP3-218ENST00000594320 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
PCBP3-218ENST00000594320 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
PCBP3-218ENST00000594320 KIF21AQ7Z4S6 1674 aa22.91■■□□□ 1.26
PCBP3-218ENST00000594320 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
PCBP3-218ENST00000594320 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
PCBP3-218ENST00000594320 TRIM41Q8WV44 630 aa22.64■■□□□ 1.21
PCBP3-218ENST00000594320 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
PCBP3-218ENST00000594320 MRC2Q9UBG0 1479 aa22.63■■□□□ 1.21
PCBP3-218ENST00000594320 WIZO95785 1651 aa22.6■■□□□ 1.21
PCBP3-218ENST00000594320 WDR62O43379 1518 aa22.57■■□□□ 1.2
PCBP3-218ENST00000594320 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
PCBP3-218ENST00000594320 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
PCBP3-218ENST00000594320 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
PCBP3-218ENST00000594320 CFTRP13569 1480 aa22.32■■□□□ 1.16
PCBP3-218ENST00000594320 OSCARQ8IYS5 282 aa22.28■■□□□ 1.16
PCBP3-218ENST00000594320 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
PCBP3-218ENST00000594320 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
PCBP3-218ENST00000594320 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
PCBP3-218ENST00000594320 RIMBP3CA6NJZ7 1639 aa22.1■■□□□ 1.13
PCBP3-218ENST00000594320 RIMBP3BA6NNM3 1639 aa22.1■■□□□ 1.13
PCBP3-218ENST00000594320 RIMBP3Q9UFD9 1639 aa22.1■■□□□ 1.13
PCBP3-218ENST00000594320 SUPT5HO00267 1087 aaKnown RBP22.04■■□□□ 1.12
PCBP3-218ENST00000594320 ZNF608Q9ULD9 1512 aaPredicted RBP22.03■■□□□ 1.12
PCBP3-218ENST00000594320 IFT140Q96RY7 1462 aa22.03■■□□□ 1.12
PCBP3-218ENST00000594320 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
PCBP3-218ENST00000594320 TOPBP1Q92547 1522 aa21.97■■□□□ 1.11
PCBP3-218ENST00000594320 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
PCBP3-218ENST00000594320 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.11
PCBP3-218ENST00000594320 CHD1O14646 1710 aa21.89■■□□□ 1.1
PCBP3-218ENST00000594320 ABCC8Q09428 1581 aa21.89■■□□□ 1.09
PCBP3-218ENST00000594320 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
PCBP3-218ENST00000594320 CYB5RLQ6IPT4 315 aa21.81■■□□□ 1.08
PCBP3-218ENST00000594320 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
PCBP3-218ENST00000594320 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.08
PCBP3-218ENST00000594320 FBLN2P98095 1184 aa21.76■■□□□ 1.07
PCBP3-218ENST00000594320 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
PCBP3-218ENST00000594320 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
PCBP3-218ENST00000594320 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
PCBP3-218ENST00000594320 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
PCBP3-218ENST00000594320 SOGA1O94964 1423 aa21.62■■□□□ 1.05
PCBP3-218ENST00000594320 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
PCBP3-218ENST00000594320 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
PCBP3-218ENST00000594320 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
PCBP3-218ENST00000594320 FGD5Q6ZNL6 1462 aa21.56■■□□□ 1.04
PCBP3-218ENST00000594320 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
PCBP3-218ENST00000594320 CLASP1Q7Z460 1538 aa21.54■■□□□ 1.04
PCBP3-218ENST00000594320 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
PCBP3-218ENST00000594320 MAGI1Q96QZ7 1491 aaPredicted RBP21.5■■□□□ 1.03
PCBP3-218ENST00000594320 CUX1P39880 1505 aa21.48■■□□□ 1.03
PCBP3-218ENST00000594320 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
PCBP3-218ENST00000594320 PBRM1Q86U86 1689 aa21.46■■□□□ 1.03
PCBP3-218ENST00000594320 SYNJ2O15056 1496 aa21.43■■□□□ 1.02
PCBP3-218ENST00000594320 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
PCBP3-218ENST00000594320 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
PCBP3-218ENST00000594320 ABCA5Q8WWZ7 1642 aa21.3■■□□□ 1
PCBP3-218ENST00000594320 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
PCBP3-218ENST00000594320 ERCC6L2Q5T890 1561 aa21.21■□□□□ 0.99
PCBP3-218ENST00000594320 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
PCBP3-218ENST00000594320 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
PCBP3-218ENST00000594320 ADAMTS12P58397 1594 aa21.17■□□□□ 0.98
PCBP3-218ENST00000594320 BIVM-ERCC5R4GMW8 1640 aa21.16■□□□□ 0.98
PCBP3-218ENST00000594320 CEP170Q5SW79 1584 aa21.16■□□□□ 0.98
PCBP3-218ENST00000594320 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
PCBP3-218ENST00000594320 NUP160Q12769 1436 aa21.1■□□□□ 0.97
PCBP3-218ENST00000594320 SHROOM2Q13796 1616 aa21.09■□□□□ 0.97
PCBP3-218ENST00000594320 FHAD1B1AJZ9 1412 aa21.05■□□□□ 0.96
PCBP3-218ENST00000594320 KIF13AQ9H1H9 1805 aa21.04■□□□□ 0.96
PCBP3-218ENST00000594320 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
PCBP3-218ENST00000594320 PRG4Q92954 1404 aaPredicted RBP20.95■□□□□ 0.95
PCBP3-218ENST00000594320 JPH4Q96JJ6 628 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms