RNA–Protein interactions for RNA: ENST00000594261.5

LINC01872-201, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 5 BASIC

Gene LINC01872, Length 915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-201ENST00000594261 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
LINC01872-201ENST00000594261 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
LINC01872-201ENST00000594261 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
LINC01872-201ENST00000594261 ABCC9O60706 1549 aa24.05■■□□□ 1.44
LINC01872-201ENST00000594261 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
LINC01872-201ENST00000594261 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
LINC01872-201ENST00000594261 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
LINC01872-201ENST00000594261 NACADO15069 1562 aa23.03■■□□□ 1.28
LINC01872-201ENST00000594261 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
LINC01872-201ENST00000594261 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
LINC01872-201ENST00000594261 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
LINC01872-201ENST00000594261 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
LINC01872-201ENST00000594261 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
LINC01872-201ENST00000594261 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
LINC01872-201ENST00000594261 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
LINC01872-201ENST00000594261 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
LINC01872-201ENST00000594261 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
LINC01872-201ENST00000594261 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
LINC01872-201ENST00000594261 CC2D2AQ9P2K1 1620 aa21.76■■□□□ 1.07
LINC01872-201ENST00000594261 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
LINC01872-201ENST00000594261 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
LINC01872-201ENST00000594261 SMARCA4P51532 1647 aa21.35■■□□□ 1.01
LINC01872-201ENST00000594261 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
LINC01872-201ENST00000594261 PHF23Q9BUL5 403 aaPredicted RBP21.26■□□□□ 0.99
LINC01872-201ENST00000594261 NCAPD3P42695 1498 aa21.23■□□□□ 0.99
LINC01872-201ENST00000594261 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
LINC01872-201ENST00000594261 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
LINC01872-201ENST00000594261 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
LINC01872-201ENST00000594261 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
LINC01872-201ENST00000594261 PEG3Q9GZU2 1588 aa21.11■□□□□ 0.97
LINC01872-201ENST00000594261 BAZ1BQ9UIG0 1483 aaKnown RBP21.08■□□□□ 0.97
LINC01872-201ENST00000594261 WIZO95785 1651 aa20.96■□□□□ 0.95
LINC01872-201ENST00000594261 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
LINC01872-201ENST00000594261 NESP48681 1621 aa20.77■□□□□ 0.92
LINC01872-201ENST00000594261 ERCC6Q03468 1493 aa20.76■□□□□ 0.91
LINC01872-201ENST00000594261 TOP2AP11388 1531 aaKnown RBP20.72■□□□□ 0.91
LINC01872-201ENST00000594261 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
LINC01872-201ENST00000594261 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
LINC01872-201ENST00000594261 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
LINC01872-201ENST00000594261 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
LINC01872-201ENST00000594261 CUX2O14529 1486 aa20.54■□□□□ 0.88
LINC01872-201ENST00000594261 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
LINC01872-201ENST00000594261 CFTRP13569 1480 aa20.47■□□□□ 0.87
LINC01872-201ENST00000594261 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
LINC01872-201ENST00000594261 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
LINC01872-201ENST00000594261 CEP164Q9UPV0 1460 aa20.39■□□□□ 0.85
LINC01872-201ENST00000594261 PRDM2Q13029 1718 aa20.39■□□□□ 0.85
LINC01872-201ENST00000594261 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
LINC01872-201ENST00000594261 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.85
LINC01872-201ENST00000594261 WDR62O43379 1518 aa20.31■□□□□ 0.84
LINC01872-201ENST00000594261 FOXD1Q16676 465 aa20.24■□□□□ 0.83
LINC01872-201ENST00000594261 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
LINC01872-201ENST00000594261 ABCC8Q09428 1581 aa20.06■□□□□ 0.8
LINC01872-201ENST00000594261 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
LINC01872-201ENST00000594261 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
LINC01872-201ENST00000594261 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
LINC01872-201ENST00000594261 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
LINC01872-201ENST00000594261 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
LINC01872-201ENST00000594261 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
LINC01872-201ENST00000594261 CUX1P39880 1505 aa19.86■□□□□ 0.77
LINC01872-201ENST00000594261 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
LINC01872-201ENST00000594261 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.76
LINC01872-201ENST00000594261 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
LINC01872-201ENST00000594261 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
LINC01872-201ENST00000594261 SOGA1O94964 1423 aa19.79■□□□□ 0.76
LINC01872-201ENST00000594261 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.75
LINC01872-201ENST00000594261 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
LINC01872-201ENST00000594261 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
LINC01872-201ENST00000594261 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
LINC01872-201ENST00000594261 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
LINC01872-201ENST00000594261 OSCARQ8IYS5 282 aa19.68■□□□□ 0.74
LINC01872-201ENST00000594261 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
LINC01872-201ENST00000594261 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
LINC01872-201ENST00000594261 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
LINC01872-201ENST00000594261 CHD1O14646 1710 aa19.6■□□□□ 0.73
LINC01872-201ENST00000594261 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
LINC01872-201ENST00000594261 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.72
LINC01872-201ENST00000594261 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
LINC01872-201ENST00000594261 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
LINC01872-201ENST00000594261 FBLN2P98095 1184 aa19.57■□□□□ 0.72
LINC01872-201ENST00000594261 ABCA5Q8WWZ7 1642 aa19.56■□□□□ 0.72
LINC01872-201ENST00000594261 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
LINC01872-201ENST00000594261 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
LINC01872-201ENST00000594261 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
LINC01872-201ENST00000594261 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
LINC01872-201ENST00000594261 RIMBP3CA6NJZ7 1639 aa19.39■□□□□ 0.69
LINC01872-201ENST00000594261 RIMBP3BA6NNM3 1639 aa19.39■□□□□ 0.69
LINC01872-201ENST00000594261 RIMBP3Q9UFD9 1639 aa19.39■□□□□ 0.69
LINC01872-201ENST00000594261 ERICH3Q5RHP9 1530 aa19.38■□□□□ 0.69
LINC01872-201ENST00000594261 ARHGEF11O15085 1522 aa19.36■□□□□ 0.69
LINC01872-201ENST00000594261 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
LINC01872-201ENST00000594261 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
LINC01872-201ENST00000594261 CLASP1Q7Z460 1538 aa19.33■□□□□ 0.68
LINC01872-201ENST00000594261 GRIN2AQ12879 1464 aa19.33■□□□□ 0.68
LINC01872-201ENST00000594261 KIF27Q86VH2 1401 aa19.32■□□□□ 0.68
LINC01872-201ENST00000594261 CEP170Q5SW79 1584 aa19.24■□□□□ 0.67
LINC01872-201ENST00000594261 NUP160Q12769 1436 aa19.23■□□□□ 0.67
LINC01872-201ENST00000594261 CUL7Q14999 1698 aa19.22■□□□□ 0.67
LINC01872-201ENST00000594261 IGF1RP08069 1367 aa19.2■□□□□ 0.66
LINC01872-201ENST00000594261 CYB5RLQ6IPT4 315 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms