RNA–Protein interactions for RNA: ENST00000594044.1

ARHGEF1-206, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 834 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-206ENST00000594044 NISCHQ9Y2I1 1504 aa33.61■■■□□ 2.97
ARHGEF1-206ENST00000594044 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
ARHGEF1-206ENST00000594044 ABCC9O60706 1549 aa29.75■■■□□ 2.35
ARHGEF1-206ENST00000594044 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
ARHGEF1-206ENST00000594044 NACADO15069 1562 aa28.37■■■□□ 2.13
ARHGEF1-206ENST00000594044 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
ARHGEF1-206ENST00000594044 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
ARHGEF1-206ENST00000594044 ZCCHC6Q5VYS8 1495 aaKnown RBP27.9■■■□□ 2.06
ARHGEF1-206ENST00000594044 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
ARHGEF1-206ENST00000594044 DCAF1Q9Y4B6 1507 aa27.83■■■□□ 2.05
ARHGEF1-206ENST00000594044 DNAJC5BQ9UF47 199 aa27.75■■■□□ 2.03
ARHGEF1-206ENST00000594044 PABPN1Q86U42 306 aaKnown RBP eCLIP27.73■■■□□ 2.037e-7■■■□□ 17.3
ARHGEF1-206ENST00000594044 BICRAQ9NZM4 1560 aa27.68■■■□□ 2.02
ARHGEF1-206ENST00000594044 SHROOM4Q9ULL8 1493 aa27.34■■□□□ 1.97
ARHGEF1-206ENST00000594044 SCRIBQ14160 1630 aa27.33■■□□□ 1.97
ARHGEF1-206ENST00000594044 EIF4G1Q04637 1599 aaKnown RBP26.93■■□□□ 1.9
ARHGEF1-206ENST00000594044 CC2D2AQ9P2K1 1620 aa26.93■■□□□ 1.9
ARHGEF1-206ENST00000594044 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
ARHGEF1-206ENST00000594044 NCAPD3P42695 1498 aa26.2■■□□□ 1.78
ARHGEF1-206ENST00000594044 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
ARHGEF1-206ENST00000594044 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
ARHGEF1-206ENST00000594044 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
ARHGEF1-206ENST00000594044 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
ARHGEF1-206ENST00000594044 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
ARHGEF1-206ENST00000594044 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.75
ARHGEF1-206ENST00000594044 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
ARHGEF1-206ENST00000594044 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
ARHGEF1-206ENST00000594044 ERCC6Q03468 1493 aa25.65■■□□□ 1.7
ARHGEF1-206ENST00000594044 NESP48681 1621 aa25.64■■□□□ 1.7
ARHGEF1-206ENST00000594044 CUX2O14529 1486 aa25.6■■□□□ 1.69
ARHGEF1-206ENST00000594044 WIZO95785 1651 aa25.58■■□□□ 1.68
ARHGEF1-206ENST00000594044 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
ARHGEF1-206ENST00000594044 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
ARHGEF1-206ENST00000594044 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.65
ARHGEF1-206ENST00000594044 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
ARHGEF1-206ENST00000594044 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
ARHGEF1-206ENST00000594044 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
ARHGEF1-206ENST00000594044 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
ARHGEF1-206ENST00000594044 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
ARHGEF1-206ENST00000594044 CFTRP13569 1480 aa25.16■■□□□ 1.62
ARHGEF1-206ENST00000594044 MRC2Q9UBG0 1479 aa25.13■■□□□ 1.61
ARHGEF1-206ENST00000594044 WDR62O43379 1518 aa25.08■■□□□ 1.61
ARHGEF1-206ENST00000594044 FANCD2Q9BXW9 1451 aa25.07■■□□□ 1.6
ARHGEF1-206ENST00000594044 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
ARHGEF1-206ENST00000594044 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
ARHGEF1-206ENST00000594044 PRDM2Q13029 1718 aa24.95■■□□□ 1.59
ARHGEF1-206ENST00000594044 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
ARHGEF1-206ENST00000594044 TOPBP1Q92547 1522 aa24.64■■□□□ 1.53
ARHGEF1-206ENST00000594044 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
ARHGEF1-206ENST00000594044 IFT140Q96RY7 1462 aa24.58■■□□□ 1.53
ARHGEF1-206ENST00000594044 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
ARHGEF1-206ENST00000594044 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
ARHGEF1-206ENST00000594044 OSCARQ8IYS5 282 aa24.46■■□□□ 1.51
ARHGEF1-206ENST00000594044 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
ARHGEF1-206ENST00000594044 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
ARHGEF1-206ENST00000594044 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.5
ARHGEF1-206ENST00000594044 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
ARHGEF1-206ENST00000594044 AQRO60306 1485 aaKnown RBP eCLIP24.31■■□□□ 1.489e-7■■■■■ 34.2
ARHGEF1-206ENST00000594044 CUX1P39880 1505 aa24.3■■□□□ 1.48
ARHGEF1-206ENST00000594044 SOGA1O94964 1423 aa24.28■■□□□ 1.48
ARHGEF1-206ENST00000594044 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
ARHGEF1-206ENST00000594044 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
ARHGEF1-206ENST00000594044 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
ARHGEF1-206ENST00000594044 TDRD9Q8NDG6 1382 aaKnown RBP24.19■■□□□ 1.46
ARHGEF1-206ENST00000594044 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
ARHGEF1-206ENST00000594044 CHD1O14646 1710 aa24.16■■□□□ 1.46
ARHGEF1-206ENST00000594044 RIMBP3CA6NJZ7 1639 aa24.1■■□□□ 1.45
ARHGEF1-206ENST00000594044 RIMBP3BA6NNM3 1639 aa24.1■■□□□ 1.45
ARHGEF1-206ENST00000594044 RIMBP3Q9UFD9 1639 aa24.1■■□□□ 1.45
ARHGEF1-206ENST00000594044 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
ARHGEF1-206ENST00000594044 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
ARHGEF1-206ENST00000594044 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
ARHGEF1-206ENST00000594044 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
ARHGEF1-206ENST00000594044 ABCA10Q8WWZ4 1543 aa24.04■■□□□ 1.44
ARHGEF1-206ENST00000594044 FBLN2P98095 1184 aa24.03■■□□□ 1.44
ARHGEF1-206ENST00000594044 BIVM-ERCC5R4GMW8 1640 aa24■■□□□ 1.43
ARHGEF1-206ENST00000594044 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
ARHGEF1-206ENST00000594044 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
ARHGEF1-206ENST00000594044 WRNQ14191 1432 aaPredicted RBP eCLIP23.97■■□□□ 1.43
ARHGEF1-206ENST00000594044 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
ARHGEF1-206ENST00000594044 ABCA5Q8WWZ7 1642 aa23.97■■□□□ 1.43
ARHGEF1-206ENST00000594044 SYNJ2O15056 1496 aa23.95■■□□□ 1.42
ARHGEF1-206ENST00000594044 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.42
ARHGEF1-206ENST00000594044 SYNJ1O43426 1573 aa23.95■■□□□ 1.42
ARHGEF1-206ENST00000594044 CLASP1Q7Z460 1538 aa23.91■■□□□ 1.42
ARHGEF1-206ENST00000594044 CYB5RLQ6IPT4 315 aa23.83■■□□□ 1.41
ARHGEF1-206ENST00000594044 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
ARHGEF1-206ENST00000594044 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
ARHGEF1-206ENST00000594044 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
ARHGEF1-206ENST00000594044 GRIN2AQ12879 1464 aa23.74■■□□□ 1.39
ARHGEF1-206ENST00000594044 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
ARHGEF1-206ENST00000594044 NUP160Q12769 1436 aa23.68■■□□□ 1.38
ARHGEF1-206ENST00000594044 CEP170Q5SW79 1584 aa23.64■■□□□ 1.37
ARHGEF1-206ENST00000594044 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
ARHGEF1-206ENST00000594044 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
ARHGEF1-206ENST00000594044 IGF1RP08069 1367 aa23.51■■□□□ 1.35
ARHGEF1-206ENST00000594044 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
ARHGEF1-206ENST00000594044 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
ARHGEF1-206ENST00000594044 CUL7Q14999 1698 aa23.43■■□□□ 1.34
ARHGEF1-206ENST00000594044 JPH4Q96JJ6 628 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms