RNA–Protein interactions for RNA: ENST00000594038.5

CPT1C-205, Transcript of carnitine palmitoyltransferase 1C, humanhuman

TSL 3

Gene CPT1C, Length 503 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-205ENST00000594038 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
CPT1C-205ENST00000594038 ABCC9O60706 1549 aa30.52■■■□□ 2.48
CPT1C-205ENST00000594038 CCDC180Q9P1Z9 1646 aa30.28■■■□□ 2.44
CPT1C-205ENST00000594038 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
CPT1C-205ENST00000594038 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
CPT1C-205ENST00000594038 DNAJC5BQ9UF47 199 aa28.66■■■□□ 2.18
CPT1C-205ENST00000594038 NACADO15069 1562 aa28.65■■■□□ 2.18
CPT1C-205ENST00000594038 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
CPT1C-205ENST00000594038 UNC13AQ9UPW8 1703 aa28.3■■■□□ 2.12
CPT1C-205ENST00000594038 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.09
CPT1C-205ENST00000594038 BICRAQ9NZM4 1560 aa28.02■■■□□ 2.08
CPT1C-205ENST00000594038 ZCCHC6Q5VYS8 1495 aaKnown RBP27.82■■■□□ 2.04
CPT1C-205ENST00000594038 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
CPT1C-205ENST00000594038 SCRIBQ14160 1630 aa27.68■■■□□ 2.02
CPT1C-205ENST00000594038 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
CPT1C-205ENST00000594038 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
CPT1C-205ENST00000594038 CECR2Q9BXF3 1484 aa27.48■■□□□ 1.99
CPT1C-205ENST00000594038 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
CPT1C-205ENST00000594038 DNAJC5Q9H3Z4 198 aa26.46■■□□□ 1.83
CPT1C-205ENST00000594038 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
CPT1C-205ENST00000594038 NCAPD3P42695 1498 aa26.39■■□□□ 1.82
CPT1C-205ENST00000594038 ATAD2BQ9ULI0 1458 aa26.33■■□□□ 1.81
CPT1C-205ENST00000594038 SMARCA4P51532 1647 aa26.31■■□□□ 1.8
CPT1C-205ENST00000594038 CUX2O14529 1486 aa26.3■■□□□ 1.8
CPT1C-205ENST00000594038 SMARCA2P51531 1590 aa26.29■■□□□ 1.8
CPT1C-205ENST00000594038 HMGXB3Q12766 1538 aa26.23■■□□□ 1.79
CPT1C-205ENST00000594038 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
CPT1C-205ENST00000594038 BAZ1AQ9NRL2 1556 aaPredicted RBP26.15■■□□□ 1.78
CPT1C-205ENST00000594038 NESP48681 1621 aa26.13■■□□□ 1.77
CPT1C-205ENST00000594038 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.75
CPT1C-205ENST00000594038 MROH2BQ7Z745 1585 aa25.92■■□□□ 1.74
CPT1C-205ENST00000594038 LAMC3Q9Y6N6 1575 aa25.9■■□□□ 1.74
CPT1C-205ENST00000594038 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
CPT1C-205ENST00000594038 KIF21AQ7Z4S6 1674 aa25.84■■□□□ 1.73
CPT1C-205ENST00000594038 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
CPT1C-205ENST00000594038 WIZO95785 1651 aa25.66■■□□□ 1.7
CPT1C-205ENST00000594038 CADPSQ9ULU8 1353 aa25.63■■□□□ 1.69
CPT1C-205ENST00000594038 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
CPT1C-205ENST00000594038 WDR62O43379 1518 aa25.47■■□□□ 1.67
CPT1C-205ENST00000594038 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
CPT1C-205ENST00000594038 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
CPT1C-205ENST00000594038 FANCD2Q9BXW9 1451 aa25.39■■□□□ 1.65
CPT1C-205ENST00000594038 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
CPT1C-205ENST00000594038 RSF1Q96T23 1441 aaPredicted RBP25.29■■□□□ 1.64
CPT1C-205ENST00000594038 CFTRP13569 1480 aa25.28■■□□□ 1.64
CPT1C-205ENST00000594038 URB2Q14146 1524 aaKnown RBP25.16■■□□□ 1.62
CPT1C-205ENST00000594038 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
CPT1C-205ENST00000594038 OSCARQ8IYS5 282 aa25.12■■□□□ 1.61
CPT1C-205ENST00000594038 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
CPT1C-205ENST00000594038 IFT140Q96RY7 1462 aa24.92■■□□□ 1.58
CPT1C-205ENST00000594038 ZNF608Q9ULD9 1512 aaPredicted RBP24.9■■□□□ 1.58
CPT1C-205ENST00000594038 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
CPT1C-205ENST00000594038 RIMBP3CA6NJZ7 1639 aa24.83■■□□□ 1.57
CPT1C-205ENST00000594038 RIMBP3BA6NNM3 1639 aa24.83■■□□□ 1.57
CPT1C-205ENST00000594038 RIMBP3Q9UFD9 1639 aa24.83■■□□□ 1.57
CPT1C-205ENST00000594038 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
CPT1C-205ENST00000594038 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
CPT1C-205ENST00000594038 DNMBPQ6XZF7 1577 aa24.78■■□□□ 1.56
CPT1C-205ENST00000594038 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
CPT1C-205ENST00000594038 CHD1O14646 1710 aa24.69■■□□□ 1.54
CPT1C-205ENST00000594038 AQRO60306 1485 aaKnown RBP eCLIP24.66■■□□□ 1.54
CPT1C-205ENST00000594038 FBLN2P98095 1184 aa24.66■■□□□ 1.54
CPT1C-205ENST00000594038 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.53
CPT1C-205ENST00000594038 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
CPT1C-205ENST00000594038 CYB5RLQ6IPT4 315 aa24.59■■□□□ 1.53
CPT1C-205ENST00000594038 RAD54L2Q9Y4B4 1467 aa24.54■■□□□ 1.52
CPT1C-205ENST00000594038 SOGA1O94964 1423 aa24.51■■□□□ 1.51
CPT1C-205ENST00000594038 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
CPT1C-205ENST00000594038 TRHP20396 242 aaPredicted RBP24.46■■□□□ 1.51
CPT1C-205ENST00000594038 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.51
CPT1C-205ENST00000594038 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
CPT1C-205ENST00000594038 ARAP1Q96P48 1450 aa24.43■■□□□ 1.5
CPT1C-205ENST00000594038 CHMP7Q8WUX9 453 aaPredicted RBP24.39■■□□□ 1.49
CPT1C-205ENST00000594038 CUX1P39880 1505 aa24.37■■□□□ 1.49
CPT1C-205ENST00000594038 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
CPT1C-205ENST00000594038 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
CPT1C-205ENST00000594038 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
CPT1C-205ENST00000594038 GRIN2BQ13224 1484 aa24.31■■□□□ 1.48
CPT1C-205ENST00000594038 CLASP1Q7Z460 1538 aa24.28■■□□□ 1.48
CPT1C-205ENST00000594038 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
CPT1C-205ENST00000594038 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
CPT1C-205ENST00000594038 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
CPT1C-205ENST00000594038 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
CPT1C-205ENST00000594038 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
CPT1C-205ENST00000594038 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
CPT1C-205ENST00000594038 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
CPT1C-205ENST00000594038 GRIN2AQ12879 1464 aa24■■□□□ 1.43
CPT1C-205ENST00000594038 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
CPT1C-205ENST00000594038 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.42
CPT1C-205ENST00000594038 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
CPT1C-205ENST00000594038 ERCC6L2Q5T890 1561 aa23.93■■□□□ 1.42
CPT1C-205ENST00000594038 CEP170Q5SW79 1584 aa23.92■■□□□ 1.42
CPT1C-205ENST00000594038 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
CPT1C-205ENST00000594038 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
CPT1C-205ENST00000594038 NUP160Q12769 1436 aa23.86■■□□□ 1.41
CPT1C-205ENST00000594038 ERICH3Q5RHP9 1530 aa23.82■■□□□ 1.4
CPT1C-205ENST00000594038 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
CPT1C-205ENST00000594038 PRG4Q92954 1404 aaPredicted RBP23.73■■□□□ 1.39
CPT1C-205ENST00000594038 JPH4Q96JJ6 628 aa23.67■■□□□ 1.38
CPT1C-205ENST00000594038 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms