RNA–Protein interactions for RNA: ENST00000594021.5

DDX49-203, Transcript of DEAD-box helicase 49, humanhuman

TSL 4

Gene DDX49, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-203ENST00000594021 NISCHQ9Y2I1 1504 aa30.91■■■□□ 2.54
DDX49-203ENST00000594021 CCDC180Q9P1Z9 1646 aa27.71■■■□□ 2.03
DDX49-203ENST00000594021 ABCC9O60706 1549 aa27.68■■■□□ 2.02
DDX49-203ENST00000594021 RB1CC1Q8TDY2 1594 aa26.25■■□□□ 1.79
DDX49-203ENST00000594021 NACADO15069 1562 aa26.08■■□□□ 1.77
DDX49-203ENST00000594021 DNAJC5BQ9UF47 199 aa26.04■■□□□ 1.76
DDX49-203ENST00000594021 UNC13AQ9UPW8 1703 aa26.03■■□□□ 1.76
DDX49-203ENST00000594021 DCAF8L2P0C7V8 631 aa25.84■■□□□ 1.73
DDX49-203ENST00000594021 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
DDX49-203ENST00000594021 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
DDX49-203ENST00000594021 MYO15BQ96JP2 1530 aa25.72■■□□□ 1.71
DDX49-203ENST00000594021 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
DDX49-203ENST00000594021 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.66
DDX49-203ENST00000594021 SCRIBQ14160 1630 aa25.35■■□□□ 1.65
DDX49-203ENST00000594021 SHROOM4Q9ULL8 1493 aa25.05■■□□□ 1.6
DDX49-203ENST00000594021 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
DDX49-203ENST00000594021 EIF4G1Q04637 1599 aaKnown RBP24.98■■□□□ 1.59
DDX49-203ENST00000594021 CECR2Q9BXF3 1484 aa24.86■■□□□ 1.57
DDX49-203ENST00000594021 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
DDX49-203ENST00000594021 NCAPD3P42695 1498 aa24.09■■□□□ 1.45
DDX49-203ENST00000594021 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
DDX49-203ENST00000594021 HMGXB3Q12766 1538 aa23.96■■□□□ 1.43
DDX49-203ENST00000594021 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
DDX49-203ENST00000594021 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
DDX49-203ENST00000594021 NESP48681 1621 aa23.91■■□□□ 1.42
DDX49-203ENST00000594021 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
DDX49-203ENST00000594021 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
DDX49-203ENST00000594021 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
DDX49-203ENST00000594021 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
DDX49-203ENST00000594021 WIZO95785 1651 aa23.68■■□□□ 1.38
DDX49-203ENST00000594021 CUX2O14529 1486 aa23.68■■□□□ 1.38
DDX49-203ENST00000594021 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
DDX49-203ENST00000594021 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.38
DDX49-203ENST00000594021 DNAJC5Q9H3Z4 198 aa23.6■■□□□ 1.37
DDX49-203ENST00000594021 LAMC3Q9Y6N6 1575 aa23.54■■□□□ 1.36
DDX49-203ENST00000594021 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
DDX49-203ENST00000594021 CADPSQ9ULU8 1353 aa23.33■■□□□ 1.33
DDX49-203ENST00000594021 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
DDX49-203ENST00000594021 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
DDX49-203ENST00000594021 WDR62O43379 1518 aa23.23■■□□□ 1.31
DDX49-203ENST00000594021 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
DDX49-203ENST00000594021 CFTRP13569 1480 aa23.15■■□□□ 1.3
DDX49-203ENST00000594021 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
DDX49-203ENST00000594021 CEP164Q9UPV0 1460 aa23.1■■□□□ 1.29
DDX49-203ENST00000594021 PRDM2Q13029 1718 aa23.07■■□□□ 1.28
DDX49-203ENST00000594021 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
DDX49-203ENST00000594021 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
DDX49-203ENST00000594021 ZNF608Q9ULD9 1512 aaPredicted RBP22.78■■□□□ 1.24
DDX49-203ENST00000594021 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
DDX49-203ENST00000594021 EIF4G3O43432 1585 aaKnown RBP22.65■■□□□ 1.22
DDX49-203ENST00000594021 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
DDX49-203ENST00000594021 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
DDX49-203ENST00000594021 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
DDX49-203ENST00000594021 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
DDX49-203ENST00000594021 CHD1O14646 1710 aa22.54■■□□□ 1.2
DDX49-203ENST00000594021 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
DDX49-203ENST00000594021 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
DDX49-203ENST00000594021 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
DDX49-203ENST00000594021 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
DDX49-203ENST00000594021 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19
DDX49-203ENST00000594021 RAD54L2Q9Y4B4 1467 aa22.49■■□□□ 1.19
DDX49-203ENST00000594021 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
DDX49-203ENST00000594021 CUX1P39880 1505 aa22.47■■□□□ 1.19
DDX49-203ENST00000594021 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
DDX49-203ENST00000594021 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
DDX49-203ENST00000594021 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
DDX49-203ENST00000594021 ARHGEF11O15085 1522 aa22.38■■□□□ 1.17
DDX49-203ENST00000594021 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
DDX49-203ENST00000594021 SOGA1O94964 1423 aa22.3■■□□□ 1.16
DDX49-203ENST00000594021 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
DDX49-203ENST00000594021 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
DDX49-203ENST00000594021 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
DDX49-203ENST00000594021 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
DDX49-203ENST00000594021 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
DDX49-203ENST00000594021 ABCA5Q8WWZ7 1642 aa22.18■■□□□ 1.14
DDX49-203ENST00000594021 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
DDX49-203ENST00000594021 FBLN2P98095 1184 aa22.13■■□□□ 1.13
DDX49-203ENST00000594021 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
DDX49-203ENST00000594021 BIVM-ERCC5R4GMW8 1640 aa22.09■■□□□ 1.13
DDX49-203ENST00000594021 MAGI1Q96QZ7 1491 aaPredicted RBP22.09■■□□□ 1.13
DDX49-203ENST00000594021 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
DDX49-203ENST00000594021 GAPVD1Q14C86 1478 aa22.07■■□□□ 1.12
DDX49-203ENST00000594021 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
DDX49-203ENST00000594021 SYNJ2O15056 1496 aa22.05■■□□□ 1.12
DDX49-203ENST00000594021 TOP2BQ02880 1626 aa22.05■■□□□ 1.12
DDX49-203ENST00000594021 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
DDX49-203ENST00000594021 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
DDX49-203ENST00000594021 CEP170Q5SW79 1584 aa21.95■■□□□ 1.1
DDX49-203ENST00000594021 CHMP7Q8WUX9 453 aaPredicted RBP21.94■■□□□ 1.1
DDX49-203ENST00000594021 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
DDX49-203ENST00000594021 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
DDX49-203ENST00000594021 NUP160Q12769 1436 aa21.83■■□□□ 1.09
DDX49-203ENST00000594021 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
DDX49-203ENST00000594021 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
DDX49-203ENST00000594021 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
DDX49-203ENST00000594021 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.06
DDX49-203ENST00000594021 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
DDX49-203ENST00000594021 KIF13AQ9H1H9 1805 aa21.59■■□□□ 1.05
DDX49-203ENST00000594021 PRG4Q92954 1404 aaPredicted RBP21.56■■□□□ 1.04
DDX49-203ENST00000594021 IGF1RP08069 1367 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms