RNA–Protein interactions for RNA: ENST00000593932.1

SPTBN4-206, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-206ENST00000593932 NISCHQ9Y2I1 1504 aa55.41■■■■■ 6.46
SPTBN4-206ENST00000593932 CCDC180Q9P1Z9 1646 aa49.61■■■■■ 5.53
SPTBN4-206ENST00000593932 ABCC9O60706 1549 aa49.26■■■■■ 5.48
SPTBN4-206ENST00000593932 RB1CC1Q8TDY2 1594 aa47.04■■■■■ 5.12
SPTBN4-206ENST00000593932 NACADO15069 1562 aa46.79■■■■■ 5.08
SPTBN4-206ENST00000593932 DCAF8L2P0C7V8 631 aa46.56■■■■■ 5.04
SPTBN4-206ENST00000593932 MYO15BQ96JP2 1530 aa46.26■■■■■ 5
SPTBN4-206ENST00000593932 ZCCHC6Q5VYS8 1495 aaKnown RBP46.02■■■■■ 4.96
SPTBN4-206ENST00000593932 UNC13AQ9UPW8 1703 aa46.02■■■■■ 4.96
SPTBN4-206ENST00000593932 PABPN1Q86U42 306 aaKnown RBP eCLIP45.88■■■■■ 4.94
SPTBN4-206ENST00000593932 DNAJC5BQ9UF47 199 aa45.88■■■■■ 4.94
SPTBN4-206ENST00000593932 DCAF1Q9Y4B6 1507 aa45.8■■■■■ 4.92
SPTBN4-206ENST00000593932 BICRAQ9NZM4 1560 aa45.68■■■■■ 4.9
SPTBN4-206ENST00000593932 SCRIBQ14160 1630 aa45.23■■■■■ 4.83
SPTBN4-206ENST00000593932 SHROOM4Q9ULL8 1493 aa45.08■■■■■ 4.81
SPTBN4-206ENST00000593932 CC2D2AQ9P2K1 1620 aa44.53■■■■■ 4.72
SPTBN4-206ENST00000593932 EIF4G1Q04637 1599 aaKnown RBP44.52■■■■■ 4.72
SPTBN4-206ENST00000593932 CECR2Q9BXF3 1484 aa44.33■■■■■ 4.69
SPTBN4-206ENST00000593932 NCAPD3P42695 1498 aa43.19■■■■■ 4.5
SPTBN4-206ENST00000593932 SMARCA4P51532 1647 aa43.18■■■■■ 4.5
SPTBN4-206ENST00000593932 ATAD2BQ9ULI0 1458 aa43.11■■■■■ 4.49
SPTBN4-206ENST00000593932 SMARCA2P51531 1590 aa43.02■■■■■ 4.48
SPTBN4-206ENST00000593932 BAZ1AQ9NRL2 1556 aaPredicted RBP42.99■■■■■ 4.47
SPTBN4-206ENST00000593932 HMGXB3Q12766 1538 aa42.92■■■■■ 4.46
SPTBN4-206ENST00000593932 PEG3Q9GZU2 1588 aa42.75■■■■■ 4.43
SPTBN4-206ENST00000593932 MROH2BQ7Z745 1585 aa42.72■■■■■ 4.43
SPTBN4-206ENST00000593932 BAZ1BQ9UIG0 1483 aaKnown RBP42.71■■■■■ 4.43
SPTBN4-206ENST00000593932 ERCC6Q03468 1493 aa42.49■■■■■ 4.39
SPTBN4-206ENST00000593932 NESP48681 1621 aa42.42■■■■■ 4.38
SPTBN4-206ENST00000593932 CUX2O14529 1486 aa42.3■■■■■ 4.36
SPTBN4-206ENST00000593932 WIZO95785 1651 aa42.22■■■■■ 4.35
SPTBN4-206ENST00000593932 LAMC3Q9Y6N6 1575 aa42.18■■■■■ 4.34
SPTBN4-206ENST00000593932 THOC2Q8NI27 1593 aaKnown RBP41.95■■■■■ 4.31
SPTBN4-206ENST00000593932 RSF1Q96T23 1441 aaPredicted RBP41.94■■■■■ 4.3
SPTBN4-206ENST00000593932 KIF21AQ7Z4S6 1674 aa41.91■■■■■ 4.3
SPTBN4-206ENST00000593932 PDS5BQ9NTI5 1447 aa41.88■■■■■ 4.3
SPTBN4-206ENST00000593932 CADPSQ9ULU8 1353 aa41.88■■■■■ 4.29
SPTBN4-206ENST00000593932 DNAJC5Q9H3Z4 198 aa41.86■■■■■ 4.29
SPTBN4-206ENST00000593932 TOP2AP11388 1531 aaKnown RBP41.72■■■■■ 4.27
SPTBN4-206ENST00000593932 MRC2Q9UBG0 1479 aa41.53■■■■■ 4.24
SPTBN4-206ENST00000593932 CFTRP13569 1480 aa41.49■■■■■ 4.23
SPTBN4-206ENST00000593932 CEP164Q9UPV0 1460 aa41.44■■■■■ 4.22
SPTBN4-206ENST00000593932 WDR62O43379 1518 aa41.44■■■■■ 4.22
SPTBN4-206ENST00000593932 FANCD2Q9BXW9 1451 aa41.42■■■■■ 4.22
SPTBN4-206ENST00000593932 CCDC88BA6NC98 1476 aa41.22■■■■■ 4.19
SPTBN4-206ENST00000593932 PRDM2Q13029 1718 aa41.15■■■■■ 4.18
SPTBN4-206ENST00000593932 URB2Q14146 1524 aaKnown RBP41.08■■■■■ 4.17
SPTBN4-206ENST00000593932 TOPBP1Q92547 1522 aa40.69■■■■■ 4.1
SPTBN4-206ENST00000593932 IFT140Q96RY7 1462 aa40.59■■■■■ 4.09
SPTBN4-206ENST00000593932 ABCC8Q09428 1581 aa40.59■■■■■ 4.09
SPTBN4-206ENST00000593932 DNMBPQ6XZF7 1577 aa40.57■■■■■ 4.09
SPTBN4-206ENST00000593932 ZNF608Q9ULD9 1512 aaPredicted RBP40.52■■■■■ 4.08
SPTBN4-206ENST00000593932 OSCARQ8IYS5 282 aa40.39■■■■■ 4.06
SPTBN4-206ENST00000593932 EIF4G3O43432 1585 aaKnown RBP40.33■■■■■ 4.05
SPTBN4-206ENST00000593932 TARBP1Q13395 1621 aaKnown RBP40.32■■■■■ 4.05
SPTBN4-206ENST00000593932 SUPT5HO00267 1087 aaKnown RBP40.3■■■■■ 4.04
SPTBN4-206ENST00000593932 POLA1P09884 1462 aaPredicted RBP40.29■■■■■ 4.04
SPTBN4-206ENST00000593932 TRIM41Q8WV44 630 aa40.18■■■■■ 4.02
SPTBN4-206ENST00000593932 AQRO60306 1485 aaKnown RBP eCLIP40.17■■■■■ 4.02
SPTBN4-206ENST00000593932 RAD54L2Q9Y4B4 1467 aa40.13■■■■■ 4.02
SPTBN4-206ENST00000593932 CUX1P39880 1505 aa40.12■■■■■ 4.01
SPTBN4-206ENST00000593932 FGD5Q6ZNL6 1462 aa40.09■■■■■ 4.01
SPTBN4-206ENST00000593932 SOGA1O94964 1423 aa40.08■■■■■ 4.01
SPTBN4-206ENST00000593932 TDRD9Q8NDG6 1382 aaKnown RBP39.97■■■■□ 3.99
SPTBN4-206ENST00000593932 CHD1O14646 1710 aa39.96■■■■□ 3.99
SPTBN4-206ENST00000593932 WDR97A6NE52 1622 aa39.91■■■■□ 3.98
SPTBN4-206ENST00000593932 RIMBP3CA6NJZ7 1639 aa39.9■■■■□ 3.98
SPTBN4-206ENST00000593932 RIMBP3BA6NNM3 1639 aa39.9■■■■□ 3.98
SPTBN4-206ENST00000593932 RIMBP3Q9UFD9 1639 aa39.9■■■■□ 3.98
SPTBN4-206ENST00000593932 FBLN2P98095 1184 aa39.8■■■■□ 3.96
SPTBN4-206ENST00000593932 ARHGEF11O15085 1522 aa39.8■■■■□ 3.96
SPTBN4-206ENST00000593932 SNAPC4Q5SXM2 1469 aa39.79■■■■□ 3.96
SPTBN4-206ENST00000593932 GRIN2BQ13224 1484 aa39.72■■■■□ 3.95
SPTBN4-206ENST00000593932 MAGI1Q96QZ7 1491 aaPredicted RBP39.68■■■■□ 3.94
SPTBN4-206ENST00000593932 ABCA10Q8WWZ4 1543 aa39.65■■■■□ 3.94
SPTBN4-206ENST00000593932 PBRM1Q86U86 1689 aa39.63■■■■□ 3.93
SPTBN4-206ENST00000593932 GAPVD1Q14C86 1478 aa39.62■■■■□ 3.93
SPTBN4-206ENST00000593932 ABCA5Q8WWZ7 1642 aa39.59■■■■□ 3.93
SPTBN4-206ENST00000593932 BIVM-ERCC5R4GMW8 1640 aa39.58■■■■□ 3.93
SPTBN4-206ENST00000593932 TOP2BQ02880 1626 aa39.57■■■■□ 3.92
SPTBN4-206ENST00000593932 CHMP7Q8WUX9 453 aaPredicted RBP39.56■■■■□ 3.92
SPTBN4-206ENST00000593932 WRNQ14191 1432 aaPredicted RBP eCLIP39.56■■■■□ 3.92
SPTBN4-206ENST00000593932 SYNJ2O15056 1496 aa39.55■■■■□ 3.92
SPTBN4-206ENST00000593932 SYNJ1O43426 1573 aa39.54■■■■□ 3.92
SPTBN4-206ENST00000593932 CLASP1Q7Z460 1538 aa39.5■■■■□ 3.91
SPTBN4-206ENST00000593932 ARAP1Q96P48 1450 aa39.43■■■■□ 3.9
SPTBN4-206ENST00000593932 CYB5RLQ6IPT4 315 aa39.43■■■■□ 3.9
SPTBN4-206ENST00000593932 ADAMTS12P58397 1594 aa39.27■■■■□ 3.88
SPTBN4-206ENST00000593932 GRIN2AQ12879 1464 aa39.22■■■■□ 3.87
SPTBN4-206ENST00000593932 ERICH3Q5RHP9 1530 aa39.16■■■■□ 3.86
SPTBN4-206ENST00000593932 FHAD1B1AJZ9 1412 aa39.14■■■■□ 3.86
SPTBN4-206ENST00000593932 CEP170Q5SW79 1584 aa39.08■■■■□ 3.85
SPTBN4-206ENST00000593932 NUP160Q12769 1436 aa39.07■■■■□ 3.85
SPTBN4-206ENST00000593932 ERCC6L2Q5T890 1561 aa38.92■■■■□ 3.82
SPTBN4-206ENST00000593932 SHROOM2Q13796 1616 aa38.88■■■■□ 3.81
SPTBN4-206ENST00000593932 TRHP20396 242 aaPredicted RBP38.87■■■■□ 3.81
SPTBN4-206ENST00000593932 KIF27Q86VH2 1401 aa38.77■■■■□ 3.8
SPTBN4-206ENST00000593932 IGF1RP08069 1367 aa38.71■■■■□ 3.79
SPTBN4-206ENST00000593932 RUSC2Q8N2Y8 1516 aa38.71■■■■□ 3.79
SPTBN4-206ENST00000593932 CUL7Q14999 1698 aa38.67■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms