RNA–Protein interactions for RNA: ENST00000593687.5

ZNF546-202, Transcript of zinc finger protein 546, humanhuman

TSL 4

Gene ZNF546, Length 490 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-202ENST00000593687 NISCHQ9Y2I1 1504 aa20.12■□□□□ 0.81
ZNF546-202ENST00000593687 ABCC9O60706 1549 aa18.54■□□□□ 0.56
ZNF546-202ENST00000593687 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
ZNF546-202ENST00000593687 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
ZNF546-202ENST00000593687 RB1CC1Q8TDY2 1594 aa17.59■□□□□ 0.41
ZNF546-202ENST00000593687 NACADO15069 1562 aa17.38■□□□□ 0.37
ZNF546-202ENST00000593687 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
ZNF546-202ENST00000593687 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
ZNF546-202ENST00000593687 MYO15BQ96JP2 1530 aa17.05■□□□□ 0.32
ZNF546-202ENST00000593687 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.31
ZNF546-202ENST00000593687 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
ZNF546-202ENST00000593687 SHROOM4Q9ULL8 1493 aa16.91■□□□□ 0.3
ZNF546-202ENST00000593687 CECR2Q9BXF3 1484 aa16.79■□□□□ 0.28
ZNF546-202ENST00000593687 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
ZNF546-202ENST00000593687 DCAF1Q9Y4B6 1507 aa16.67■□□□□ 0.26
ZNF546-202ENST00000593687 EIF4G1Q04637 1599 aaKnown RBP16.67■□□□□ 0.26
ZNF546-202ENST00000593687 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
ZNF546-202ENST00000593687 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
ZNF546-202ENST00000593687 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
ZNF546-202ENST00000593687 CUX2O14529 1486 aa16.25■□□□□ 0.19
ZNF546-202ENST00000593687 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
ZNF546-202ENST00000593687 NCAPD3P42695 1498 aa16■□□□□ 0.15
ZNF546-202ENST00000593687 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
ZNF546-202ENST00000593687 SMARCA2P51531 1590 aa15.88■□□□□ 0.13
ZNF546-202ENST00000593687 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
ZNF546-202ENST00000593687 THOC2Q8NI27 1593 aaKnown RBP15.81■□□□□ 0.12
ZNF546-202ENST00000593687 NESP48681 1621 aa15.79■□□□□ 0.12
ZNF546-202ENST00000593687 SMARCA4P51532 1647 aa15.79■□□□□ 0.12
ZNF546-202ENST00000593687 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
ZNF546-202ENST00000593687 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
ZNF546-202ENST00000593687 PEG3Q9GZU2 1588 aa15.69■□□□□ 0.1
ZNF546-202ENST00000593687 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
ZNF546-202ENST00000593687 KIF21AQ7Z4S6 1674 aa15.66■□□□□ 0.1
ZNF546-202ENST00000593687 PDS5BQ9NTI5 1447 aa15.64■□□□□ 0.09
ZNF546-202ENST00000593687 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
ZNF546-202ENST00000593687 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.08
ZNF546-202ENST00000593687 WDR62O43379 1518 aa15.52■□□□□ 0.07
ZNF546-202ENST00000593687 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
ZNF546-202ENST00000593687 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
ZNF546-202ENST00000593687 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
ZNF546-202ENST00000593687 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
ZNF546-202ENST00000593687 FANCD2Q9BXW9 1451 aa15.32■□□□□ 0.04
ZNF546-202ENST00000593687 WIZO95785 1651 aa15.25■□□□□ 0.03
ZNF546-202ENST00000593687 CFTRP13569 1480 aa15.24■□□□□ 0.03
ZNF546-202ENST00000593687 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
ZNF546-202ENST00000593687 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
ZNF546-202ENST00000593687 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
ZNF546-202ENST00000593687 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
ZNF546-202ENST00000593687 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
ZNF546-202ENST00000593687 ARHGEF11O15085 1522 aa15.15■□□□□ 0.02
ZNF546-202ENST00000593687 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
ZNF546-202ENST00000593687 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
ZNF546-202ENST00000593687 ZNF608Q9ULD9 1512 aaPredicted RBP15.03■□□□□ -0
ZNF546-202ENST00000593687 EIF4G3O43432 1585 aaKnown RBP15.02□□□□□ -0.01
ZNF546-202ENST00000593687 ABCC8Q09428 1581 aa14.99□□□□□ -0.01
ZNF546-202ENST00000593687 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
ZNF546-202ENST00000593687 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
ZNF546-202ENST00000593687 CYB5RLQ6IPT4 315 aa14.97□□□□□ -0.01
ZNF546-202ENST00000593687 CHD1O14646 1710 aa14.96□□□□□ -0.01
ZNF546-202ENST00000593687 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
ZNF546-202ENST00000593687 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
ZNF546-202ENST00000593687 DNMBPQ6XZF7 1577 aa14.93□□□□□ -0.02
ZNF546-202ENST00000593687 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
ZNF546-202ENST00000593687 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
ZNF546-202ENST00000593687 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.03
ZNF546-202ENST00000593687 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
ZNF546-202ENST00000593687 WDR97A6NE52 1622 aa14.82□□□□□ -0.04
ZNF546-202ENST00000593687 FBLN2P98095 1184 aa14.8□□□□□ -0.04
ZNF546-202ENST00000593687 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
ZNF546-202ENST00000593687 CLASP1Q7Z460 1538 aa14.79□□□□□ -0.04
ZNF546-202ENST00000593687 SYNJ1O43426 1573 aa14.77□□□□□ -0.04
ZNF546-202ENST00000593687 MAGI1Q96QZ7 1491 aaPredicted RBP14.74□□□□□ -0.05
ZNF546-202ENST00000593687 SNAPC4Q5SXM2 1469 aa14.73□□□□□ -0.05
ZNF546-202ENST00000593687 SOGA1O94964 1423 aa14.7□□□□□ -0.06
ZNF546-202ENST00000593687 RAD54L2Q9Y4B4 1467 aa14.69□□□□□ -0.06
ZNF546-202ENST00000593687 TDRD9Q8NDG6 1382 aaKnown RBP14.68□□□□□ -0.06
ZNF546-202ENST00000593687 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
ZNF546-202ENST00000593687 SYNJ2O15056 1496 aa14.67□□□□□ -0.06
ZNF546-202ENST00000593687 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
ZNF546-202ENST00000593687 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
ZNF546-202ENST00000593687 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
ZNF546-202ENST00000593687 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
ZNF546-202ENST00000593687 CUX1P39880 1505 aa14.56□□□□□ -0.08
ZNF546-202ENST00000593687 ABCA5Q8WWZ7 1642 aa14.52□□□□□ -0.09
ZNF546-202ENST00000593687 ABCA10Q8WWZ4 1543 aa14.49□□□□□ -0.09
ZNF546-202ENST00000593687 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
ZNF546-202ENST00000593687 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
ZNF546-202ENST00000593687 KIF13AQ9H1H9 1805 aa14.45□□□□□ -0.1
ZNF546-202ENST00000593687 SHROOM2Q13796 1616 aa14.44□□□□□ -0.1
ZNF546-202ENST00000593687 ERCC6L2Q5T890 1561 aa14.44□□□□□ -0.1
ZNF546-202ENST00000593687 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
ZNF546-202ENST00000593687 NUP160Q12769 1436 aa14.43□□□□□ -0.1
ZNF546-202ENST00000593687 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
ZNF546-202ENST00000593687 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
ZNF546-202ENST00000593687 ERICH3Q5RHP9 1530 aa14.32□□□□□ -0.12
ZNF546-202ENST00000593687 ABCC10Q5T3U5 1492 aa14.31□□□□□ -0.12
ZNF546-202ENST00000593687 MAPKBP1O60336 1514 aa14.31□□□□□ -0.12
ZNF546-202ENST00000593687 PRG4Q92954 1404 aaPredicted RBP14.29□□□□□ -0.12
ZNF546-202ENST00000593687 DIP2BQ9P265 1576 aa14.29□□□□□ -0.12
ZNF546-202ENST00000593687 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms