RNA–Protein interactions for RNA: ENST00000593624.5

LINC00854-203, Long intergenic non-protein coding RNA 854, humanhuman

TSL 5

Gene LINC00854, Length 736 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-203ENST00000593624 NISCHQ9Y2I1 1504 aa26.64■■□□□ 1.85
LINC00854-203ENST00000593624 ABCC9O60706 1549 aa24.49■■□□□ 1.51
LINC00854-203ENST00000593624 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
LINC00854-203ENST00000593624 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
LINC00854-203ENST00000593624 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
LINC00854-203ENST00000593624 NACADO15069 1562 aa22.85■■□□□ 1.25
LINC00854-203ENST00000593624 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.24
LINC00854-203ENST00000593624 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
LINC00854-203ENST00000593624 UNC13AQ9UPW8 1703 aa22.52■■□□□ 1.2
LINC00854-203ENST00000593624 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
LINC00854-203ENST00000593624 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
LINC00854-203ENST00000593624 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
LINC00854-203ENST00000593624 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
LINC00854-203ENST00000593624 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
LINC00854-203ENST00000593624 ZCCHC6Q5VYS8 1495 aaKnown RBP21.97■■□□□ 1.11
LINC00854-203ENST00000593624 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
LINC00854-203ENST00000593624 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
LINC00854-203ENST00000593624 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
LINC00854-203ENST00000593624 DNAJC5Q9H3Z4 198 aa21.78■■□□□ 1.08
LINC00854-203ENST00000593624 CUX2O14529 1486 aa21.26■□□□□ 0.99
LINC00854-203ENST00000593624 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
LINC00854-203ENST00000593624 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
LINC00854-203ENST00000593624 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
LINC00854-203ENST00000593624 NESP48681 1621 aa20.92■□□□□ 0.94
LINC00854-203ENST00000593624 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
LINC00854-203ENST00000593624 HMGXB3Q12766 1538 aa20.89■□□□□ 0.94
LINC00854-203ENST00000593624 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
LINC00854-203ENST00000593624 BAZ1BQ9UIG0 1483 aaKnown RBP20.78■□□□□ 0.92
LINC00854-203ENST00000593624 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
LINC00854-203ENST00000593624 BAZ1AQ9NRL2 1556 aaPredicted RBP20.71■□□□□ 0.91
LINC00854-203ENST00000593624 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
LINC00854-203ENST00000593624 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
LINC00854-203ENST00000593624 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.89
LINC00854-203ENST00000593624 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
LINC00854-203ENST00000593624 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
LINC00854-203ENST00000593624 MROH2BQ7Z745 1585 aa20.52■□□□□ 0.88
LINC00854-203ENST00000593624 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
LINC00854-203ENST00000593624 MRC2Q9UBG0 1479 aa20.44■□□□□ 0.86
LINC00854-203ENST00000593624 WDR62O43379 1518 aa20.37■□□□□ 0.85
LINC00854-203ENST00000593624 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
LINC00854-203ENST00000593624 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
LINC00854-203ENST00000593624 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
LINC00854-203ENST00000593624 WIZO95785 1651 aa20.24■□□□□ 0.83
LINC00854-203ENST00000593624 CFTRP13569 1480 aa20.15■□□□□ 0.82
LINC00854-203ENST00000593624 URB2Q14146 1524 aaKnown RBP20.08■□□□□ 0.81
LINC00854-203ENST00000593624 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
LINC00854-203ENST00000593624 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
LINC00854-203ENST00000593624 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
LINC00854-203ENST00000593624 RSF1Q96T23 1441 aaPredicted RBP19.98■□□□□ 0.79
LINC00854-203ENST00000593624 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
LINC00854-203ENST00000593624 IFT140Q96RY7 1462 aa19.91■□□□□ 0.78
LINC00854-203ENST00000593624 ZNF608Q9ULD9 1512 aaPredicted RBP19.91■□□□□ 0.78
LINC00854-203ENST00000593624 ARHGEF11O15085 1522 aa19.9■□□□□ 0.78
LINC00854-203ENST00000593624 CYB5RLQ6IPT4 315 aa19.87■□□□□ 0.77
LINC00854-203ENST00000593624 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
LINC00854-203ENST00000593624 TRHP20396 242 aaPredicted RBP19.8■□□□□ 0.76
LINC00854-203ENST00000593624 TOPBP1Q92547 1522 aa19.8■□□□□ 0.76
LINC00854-203ENST00000593624 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
LINC00854-203ENST00000593624 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
LINC00854-203ENST00000593624 EIF4G3O43432 1585 aaKnown RBP19.73■□□□□ 0.75
LINC00854-203ENST00000593624 FBLN2P98095 1184 aa19.72■□□□□ 0.75
LINC00854-203ENST00000593624 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
LINC00854-203ENST00000593624 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
LINC00854-203ENST00000593624 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
LINC00854-203ENST00000593624 CHD1O14646 1710 aa19.65■□□□□ 0.74
LINC00854-203ENST00000593624 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
LINC00854-203ENST00000593624 POLA1P09884 1462 aaPredicted RBP19.57■□□□□ 0.72
LINC00854-203ENST00000593624 TDRD9Q8NDG6 1382 aaKnown RBP19.55■□□□□ 0.72
LINC00854-203ENST00000593624 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
LINC00854-203ENST00000593624 SOGA1O94964 1423 aa19.52■□□□□ 0.72
LINC00854-203ENST00000593624 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
LINC00854-203ENST00000593624 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
LINC00854-203ENST00000593624 SNAPC4Q5SXM2 1469 aa19.46■□□□□ 0.71
LINC00854-203ENST00000593624 CLASP1Q7Z460 1538 aa19.43■□□□□ 0.7
LINC00854-203ENST00000593624 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
LINC00854-203ENST00000593624 FGD5Q6ZNL6 1462 aa19.4■□□□□ 0.7
LINC00854-203ENST00000593624 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
LINC00854-203ENST00000593624 WDR97A6NE52 1622 aa19.39■□□□□ 0.69
LINC00854-203ENST00000593624 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
LINC00854-203ENST00000593624 SYNJ2O15056 1496 aa19.35■□□□□ 0.69
LINC00854-203ENST00000593624 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
LINC00854-203ENST00000593624 CUX1P39880 1505 aa19.3■□□□□ 0.68
LINC00854-203ENST00000593624 PBRM1Q86U86 1689 aa19.19■□□□□ 0.66
LINC00854-203ENST00000593624 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
LINC00854-203ENST00000593624 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
LINC00854-203ENST00000593624 ERCC6L2Q5T890 1561 aa19.11■□□□□ 0.65
LINC00854-203ENST00000593624 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
LINC00854-203ENST00000593624 NUP160Q12769 1436 aa19.06■□□□□ 0.64
LINC00854-203ENST00000593624 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
LINC00854-203ENST00000593624 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
LINC00854-203ENST00000593624 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
LINC00854-203ENST00000593624 ADAMTS12P58397 1594 aa19■□□□□ 0.63
LINC00854-203ENST00000593624 SHROOM2Q13796 1616 aa18.97■□□□□ 0.63
LINC00854-203ENST00000593624 PRG4Q92954 1404 aaPredicted RBP18.94■□□□□ 0.62
LINC00854-203ENST00000593624 JPH4Q96JJ6 628 aa18.94■□□□□ 0.62
LINC00854-203ENST00000593624 KIF13AQ9H1H9 1805 aa18.93■□□□□ 0.62
LINC00854-203ENST00000593624 FAM69CQ0P6D2 419 aa18.93■□□□□ 0.62
LINC00854-203ENST00000593624 NPM1P06748 294 aaKnown RBP eCLIP18.92■□□□□ 0.62
LINC00854-203ENST00000593624 ERICH3Q5RHP9 1530 aa18.9■□□□□ 0.62
LINC00854-203ENST00000593624 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms