RNA–Protein interactions for RNA: ENST00000593604.1

FENDRR-201, FOXF1 adjacent non-coding developmental regulatory RNA, humanhuman

TSL 3

Gene FENDRR, Length 960 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FENDRR-201ENST00000593604 NISCHQ9Y2I1 1504 aa54.52■■■■■ 6.32
FENDRR-201ENST00000593604 ABCC9O60706 1549 aa48.84■■■■■ 5.41
FENDRR-201ENST00000593604 CCDC180Q9P1Z9 1646 aa48.69■■■■■ 5.38
FENDRR-201ENST00000593604 RB1CC1Q8TDY2 1594 aa46.35■■■■■ 5.01
FENDRR-201ENST00000593604 DCAF8L2P0C7V8 631 aa46.14■■■■■ 4.98
FENDRR-201ENST00000593604 NACADO15069 1562 aa46.06■■■■■ 4.96
FENDRR-201ENST00000593604 DNAJC5BQ9UF47 199 aa45.87■■■■■ 4.93
FENDRR-201ENST00000593604 PABPN1Q86U42 306 aaKnown RBP eCLIP45.6■■■■■ 4.89
FENDRR-201ENST00000593604 MYO15BQ96JP2 1530 aa45.42■■■■■ 4.86
FENDRR-201ENST00000593604 UNC13AQ9UPW8 1703 aa45.32■■■■■ 4.85
FENDRR-201ENST00000593604 ZCCHC6Q5VYS8 1495 aaKnown RBP45.2■■■■■ 4.83
FENDRR-201ENST00000593604 BICRAQ9NZM4 1560 aa45.13■■■■■ 4.82
FENDRR-201ENST00000593604 DCAF1Q9Y4B6 1507 aa44.92■■■■■ 4.78
FENDRR-201ENST00000593604 SCRIBQ14160 1630 aa44.57■■■■■ 4.73
FENDRR-201ENST00000593604 SHROOM4Q9ULL8 1493 aa44.3■■■■■ 4.68
FENDRR-201ENST00000593604 CC2D2AQ9P2K1 1620 aa44.03■■■■■ 4.64
FENDRR-201ENST00000593604 EIF4G1Q04637 1599 aaKnown RBP43.96■■■■■ 4.63
FENDRR-201ENST00000593604 CECR2Q9BXF3 1484 aa43.93■■■■■ 4.62
FENDRR-201ENST00000593604 NCAPD3P42695 1498 aa42.61■■■■■ 4.41
FENDRR-201ENST00000593604 ATAD2BQ9ULI0 1458 aa42.55■■■■■ 4.4
FENDRR-201ENST00000593604 SMARCA4P51532 1647 aa42.47■■■■■ 4.39
FENDRR-201ENST00000593604 SMARCA2P51531 1590 aa42.31■■■■■ 4.36
FENDRR-201ENST00000593604 BAZ1AQ9NRL2 1556 aaPredicted RBP42.23■■■■■ 4.35
FENDRR-201ENST00000593604 HMGXB3Q12766 1538 aa42.23■■■■■ 4.35
FENDRR-201ENST00000593604 BAZ1BQ9UIG0 1483 aaKnown RBP42.1■■■■■ 4.33
FENDRR-201ENST00000593604 MROH2BQ7Z745 1585 aa42.09■■■■■ 4.33
FENDRR-201ENST00000593604 ERCC6Q03468 1493 aa42.07■■■■■ 4.33
FENDRR-201ENST00000593604 NESP48681 1621 aa42.03■■■■■ 4.32
FENDRR-201ENST00000593604 PEG3Q9GZU2 1588 aa42.01■■■■■ 4.32
FENDRR-201ENST00000593604 CUX2O14529 1486 aa41.87■■■■■ 4.29
FENDRR-201ENST00000593604 DNAJC5Q9H3Z4 198 aa41.86■■■■■ 4.29
FENDRR-201ENST00000593604 WIZO95785 1651 aa41.55■■■■■ 4.24
FENDRR-201ENST00000593604 LAMC3Q9Y6N6 1575 aa41.54■■■■■ 4.24
FENDRR-201ENST00000593604 THOC2Q8NI27 1593 aaKnown RBP41.43■■■■■ 4.22
FENDRR-201ENST00000593604 CADPSQ9ULU8 1353 aa41.36■■■■■ 4.21
FENDRR-201ENST00000593604 PDS5BQ9NTI5 1447 aa41.35■■■■■ 4.21
FENDRR-201ENST00000593604 KIF21AQ7Z4S6 1674 aa41.34■■■■■ 4.21
FENDRR-201ENST00000593604 RSF1Q96T23 1441 aaPredicted RBP41.27■■■■■ 4.2
FENDRR-201ENST00000593604 MRC2Q9UBG0 1479 aa41.02■■■■■ 4.16
FENDRR-201ENST00000593604 TOP2AP11388 1531 aaKnown RBP40.97■■■■■ 4.15
FENDRR-201ENST00000593604 CFTRP13569 1480 aa40.89■■■■■ 4.14
FENDRR-201ENST00000593604 FANCD2Q9BXW9 1451 aa40.89■■■■■ 4.14
FENDRR-201ENST00000593604 WDR62O43379 1518 aa40.88■■■■■ 4.14
FENDRR-201ENST00000593604 CEP164Q9UPV0 1460 aa40.86■■■■■ 4.13
FENDRR-201ENST00000593604 CCDC88BA6NC98 1476 aa40.61■■■■■ 4.09
FENDRR-201ENST00000593604 URB2Q14146 1524 aaKnown RBP40.58■■■■■ 4.09
FENDRR-201ENST00000593604 PRDM2Q13029 1718 aa40.28■■■■■ 4.04
FENDRR-201ENST00000593604 TRIM41Q8WV44 630 aa40.16■■■■■ 4.02
FENDRR-201ENST00000593604 TOPBP1Q92547 1522 aa40.12■■■■■ 4.01
FENDRR-201ENST00000593604 ZNF608Q9ULD9 1512 aaPredicted RBP40.11■■■■■ 4.01
FENDRR-201ENST00000593604 OSCARQ8IYS5 282 aa40.09■■■■■ 4.01
FENDRR-201ENST00000593604 IFT140Q96RY7 1462 aa40.04■■■■■ 4
FENDRR-201ENST00000593604 DNMBPQ6XZF7 1577 aa39.92■■■■□ 3.98
FENDRR-201ENST00000593604 ABCC8Q09428 1581 aa39.89■■■■□ 3.98
FENDRR-201ENST00000593604 AQRO60306 1485 aaKnown RBP eCLIP39.76■■■■□ 3.96
FENDRR-201ENST00000593604 EIF4G3O43432 1585 aaKnown RBP39.76■■■■□ 3.95
FENDRR-201ENST00000593604 POLA1P09884 1462 aaPredicted RBP39.74■■■■□ 3.95
FENDRR-201ENST00000593604 TARBP1Q13395 1621 aaKnown RBP39.73■■■■□ 3.95
FENDRR-201ENST00000593604 RAD54L2Q9Y4B4 1467 aa39.68■■■■□ 3.94
FENDRR-201ENST00000593604 SUPT5HO00267 1087 aaKnown RBP39.65■■■■□ 3.94
FENDRR-201ENST00000593604 SOGA1O94964 1423 aa39.57■■■■□ 3.92
FENDRR-201ENST00000593604 TDRD9Q8NDG6 1382 aaKnown RBP39.56■■■■□ 3.92
FENDRR-201ENST00000593604 RIMBP3CA6NJZ7 1639 aa39.52■■■■□ 3.92
FENDRR-201ENST00000593604 RIMBP3BA6NNM3 1639 aa39.52■■■■□ 3.92
FENDRR-201ENST00000593604 RIMBP3Q9UFD9 1639 aa39.52■■■■□ 3.92
FENDRR-201ENST00000593604 CUX1P39880 1505 aa39.52■■■■□ 3.92
FENDRR-201ENST00000593604 FGD5Q6ZNL6 1462 aa39.51■■■■□ 3.92
FENDRR-201ENST00000593604 FBLN2P98095 1184 aa39.48■■■■□ 3.91
FENDRR-201ENST00000593604 ARHGEF11O15085 1522 aa39.43■■■■□ 3.9
FENDRR-201ENST00000593604 CHD1O14646 1710 aa39.41■■■■□ 3.9
FENDRR-201ENST00000593604 SNAPC4Q5SXM2 1469 aa39.3■■■■□ 3.88
FENDRR-201ENST00000593604 CYB5RLQ6IPT4 315 aa39.24■■■■□ 3.87
FENDRR-201ENST00000593604 CHMP7Q8WUX9 453 aaPredicted RBP39.15■■■■□ 3.86
FENDRR-201ENST00000593604 GRIN2BQ13224 1484 aa39.15■■■■□ 3.86
FENDRR-201ENST00000593604 WDR97A6NE52 1622 aa39.14■■■■□ 3.86
FENDRR-201ENST00000593604 ARAP1Q96P48 1450 aa39.1■■■■□ 3.85
FENDRR-201ENST00000593604 MAGI1Q96QZ7 1491 aaPredicted RBP39.1■■■■□ 3.85
FENDRR-201ENST00000593604 GAPVD1Q14C86 1478 aa39.05■■■■□ 3.84
FENDRR-201ENST00000593604 ABCA10Q8WWZ4 1543 aa39.02■■■■□ 3.84
FENDRR-201ENST00000593604 CLASP1Q7Z460 1538 aa39■■■■□ 3.83
FENDRR-201ENST00000593604 SYNJ2O15056 1496 aa39■■■■□ 3.83
FENDRR-201ENST00000593604 PBRM1Q86U86 1689 aa38.94■■■■□ 3.82
FENDRR-201ENST00000593604 ABCA5Q8WWZ7 1642 aa38.92■■■■□ 3.82
FENDRR-201ENST00000593604 SYNJ1O43426 1573 aa38.91■■■■□ 3.82
FENDRR-201ENST00000593604 WRNQ14191 1432 aaPredicted RBP eCLIP38.89■■■■□ 3.82
FENDRR-201ENST00000593604 TOP2BQ02880 1626 aa38.82■■■■□ 3.81
FENDRR-201ENST00000593604 BIVM-ERCC5R4GMW8 1640 aa38.79■■■■□ 3.8
FENDRR-201ENST00000593604 TRHP20396 242 aaPredicted RBP38.73■■■■□ 3.79
FENDRR-201ENST00000593604 GRIN2AQ12879 1464 aa38.66■■■■□ 3.78
FENDRR-201ENST00000593604 ADAMTS12P58397 1594 aa38.63■■■■□ 3.77
FENDRR-201ENST00000593604 CEP170Q5SW79 1584 aa38.55■■■■□ 3.76
FENDRR-201ENST00000593604 FHAD1B1AJZ9 1412 aa38.55■■■■□ 3.76
FENDRR-201ENST00000593604 ERCC6L2Q5T890 1561 aa38.54■■■■□ 3.76
FENDRR-201ENST00000593604 NUP160Q12769 1436 aa38.54■■■■□ 3.76
FENDRR-201ENST00000593604 ERICH3Q5RHP9 1530 aa38.48■■■■□ 3.75
FENDRR-201ENST00000593604 SHROOM2Q13796 1616 aa38.28■■■■□ 3.72
FENDRR-201ENST00000593604 JPH4Q96JJ6 628 aa38.21■■■■□ 3.71
FENDRR-201ENST00000593604 PRG4Q92954 1404 aaPredicted RBP38.2■■■■□ 3.71
FENDRR-201ENST00000593604 IGF1RP08069 1367 aa38.18■■■■□ 3.7
FENDRR-201ENST00000593604 KIF27Q86VH2 1401 aa38.09■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms