RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 NISCHQ9Y2I1 1504 aa47.04■■■■■ 5.12
PDE4C-205ENST00000593594 ABCC9O60706 1549 aa42.52■■■■■ 4.4
PDE4C-205ENST00000593594 CCDC180Q9P1Z9 1646 aa42.27■■■■■ 4.36
PDE4C-205ENST00000593594 RB1CC1Q8TDY2 1594 aa40.36■■■■■ 4.05
PDE4C-205ENST00000593594 DNAJC5BQ9UF47 199 aa40.11■■■■■ 4.01
PDE4C-205ENST00000593594 NACADO15069 1562 aa40.04■■■■■ 4
PDE4C-205ENST00000593594 DCAF8L2P0C7V8 631 aa39.82■■■■□ 3.97
PDE4C-205ENST00000593594 PABPN1Q86U42 306 aaKnown RBP eCLIP39.57■■■■□ 3.93
PDE4C-205ENST00000593594 UNC13AQ9UPW8 1703 aa39.43■■■■□ 3.9
PDE4C-205ENST00000593594 MYO15BQ96JP2 1530 aa39.42■■■■□ 3.9
PDE4C-205ENST00000593594 BICRAQ9NZM4 1560 aa39.21■■■■□ 3.87
PDE4C-205ENST00000593594 ZCCHC6Q5VYS8 1495 aaKnown RBP38.93■■■■□ 3.82
PDE4C-205ENST00000593594 DCAF1Q9Y4B6 1507 aa38.84■■■■□ 3.81
PDE4C-205ENST00000593594 SHROOM4Q9ULL8 1493 aa38.64■■■■□ 3.78
PDE4C-205ENST00000593594 SCRIBQ14160 1630 aa38.52■■■■□ 3.76
PDE4C-205ENST00000593594 CC2D2AQ9P2K1 1620 aa38.38■■■■□ 3.74
PDE4C-205ENST00000593594 CECR2Q9BXF3 1484 aa38.33■■■■□ 3.73
PDE4C-205ENST00000593594 EIF4G1Q04637 1599 aaKnown RBP38.25■■■■□ 3.71
PDE4C-205ENST00000593594 DNAJC5Q9H3Z4 198 aa36.99■■■■□ 3.51
PDE4C-205ENST00000593594 NCAPD3P42695 1498 aa36.99■■■■□ 3.51
PDE4C-205ENST00000593594 ATAD2BQ9ULI0 1458 aa36.84■■■■□ 3.49
PDE4C-205ENST00000593594 CUX2O14529 1486 aa36.73■■■■□ 3.47
PDE4C-205ENST00000593594 SMARCA4P51532 1647 aa36.73■■■■□ 3.47
PDE4C-205ENST00000593594 ERCC6Q03468 1493 aa36.72■■■■□ 3.47
PDE4C-205ENST00000593594 SMARCA2P51531 1590 aa36.7■■■■□ 3.47
PDE4C-205ENST00000593594 HMGXB3Q12766 1538 aa36.67■■■■□ 3.46
PDE4C-205ENST00000593594 BAZ1AQ9NRL2 1556 aaPredicted RBP36.52■■■■□ 3.44
PDE4C-205ENST00000593594 NESP48681 1621 aa36.47■■■■□ 3.43
PDE4C-205ENST00000593594 BAZ1BQ9UIG0 1483 aaKnown RBP36.46■■■■□ 3.43
PDE4C-205ENST00000593594 PEG3Q9GZU2 1588 aa36.38■■■■□ 3.41
PDE4C-205ENST00000593594 MROH2BQ7Z745 1585 aa36.24■■■■□ 3.39
PDE4C-205ENST00000593594 LAMC3Q9Y6N6 1575 aa36.16■■■■□ 3.38
PDE4C-205ENST00000593594 THOC2Q8NI27 1593 aaKnown RBP36.12■■■■□ 3.37
PDE4C-205ENST00000593594 PDS5BQ9NTI5 1447 aa35.98■■■■□ 3.35
PDE4C-205ENST00000593594 KIF21AQ7Z4S6 1674 aa35.96■■■■□ 3.35
PDE4C-205ENST00000593594 CADPSQ9ULU8 1353 aa35.86■■■■□ 3.33
PDE4C-205ENST00000593594 WIZO95785 1651 aa35.78■■■■□ 3.32
PDE4C-205ENST00000593594 MRC2Q9UBG0 1479 aa35.67■■■■□ 3.3
PDE4C-205ENST00000593594 WDR62O43379 1518 aa35.58■■■■□ 3.29
PDE4C-205ENST00000593594 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
PDE4C-205ENST00000593594 FANCD2Q9BXW9 1451 aa35.44■■■■□ 3.26
PDE4C-205ENST00000593594 RSF1Q96T23 1441 aaPredicted RBP35.42■■■■□ 3.26
PDE4C-205ENST00000593594 CFTRP13569 1480 aa35.39■■■■□ 3.26
PDE4C-205ENST00000593594 TOP2AP11388 1531 aaKnown RBP35.32■■■■□ 3.25
PDE4C-205ENST00000593594 TRIM41Q8WV44 630 aa35.27■■■■□ 3.24
PDE4C-205ENST00000593594 URB2Q14146 1524 aaKnown RBP35.16■■■■□ 3.22
PDE4C-205ENST00000593594 OSCARQ8IYS5 282 aa35.04■■■■□ 3.2
PDE4C-205ENST00000593594 PRDM2Q13029 1718 aa34.97■■■■□ 3.19
PDE4C-205ENST00000593594 CCDC88BA6NC98 1476 aa34.95■■■■□ 3.19
PDE4C-205ENST00000593594 IFT140Q96RY7 1462 aa34.79■■■■□ 3.16
PDE4C-205ENST00000593594 ZNF608Q9ULD9 1512 aaPredicted RBP34.76■■■■□ 3.16
PDE4C-205ENST00000593594 TOPBP1Q92547 1522 aa34.75■■■■□ 3.15
PDE4C-205ENST00000593594 ABCC8Q09428 1581 aa34.65■■■■□ 3.14
PDE4C-205ENST00000593594 DNMBPQ6XZF7 1577 aa34.58■■■■□ 3.13
PDE4C-205ENST00000593594 RIMBP3CA6NJZ7 1639 aa34.58■■■■□ 3.13
PDE4C-205ENST00000593594 RIMBP3BA6NNM3 1639 aa34.58■■■■□ 3.13
PDE4C-205ENST00000593594 RIMBP3Q9UFD9 1639 aa34.58■■■■□ 3.13
PDE4C-205ENST00000593594 EIF4G3O43432 1585 aaKnown RBP34.54■■■■□ 3.12
PDE4C-205ENST00000593594 ARHGEF11O15085 1522 aa34.46■■■■□ 3.11
PDE4C-205ENST00000593594 AQRO60306 1485 aaKnown RBP eCLIP34.44■■■■□ 3.1
PDE4C-205ENST00000593594 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
PDE4C-205ENST00000593594 POLA1P09884 1462 aaPredicted RBP34.38■■■■□ 3.09
PDE4C-205ENST00000593594 CHD1O14646 1710 aa34.31■■■■□ 3.08
PDE4C-205ENST00000593594 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
PDE4C-205ENST00000593594 FBLN2P98095 1184 aa34.25■■■■□ 3.07
PDE4C-205ENST00000593594 CYB5RLQ6IPT4 315 aa34.24■■■■□ 3.07
PDE4C-205ENST00000593594 SOGA1O94964 1423 aa34.22■■■■□ 3.07
PDE4C-205ENST00000593594 TDRD9Q8NDG6 1382 aaKnown RBP34.2■■■■□ 3.07
PDE4C-205ENST00000593594 FGD5Q6ZNL6 1462 aa34.13■■■■□ 3.05
PDE4C-205ENST00000593594 ARAP1Q96P48 1450 aa34.11■■■■□ 3.05
PDE4C-205ENST00000593594 CUX1P39880 1505 aa34.06■■■■□ 3.04
PDE4C-205ENST00000593594 WDR97A6NE52 1622 aa34.06■■■■□ 3.04
PDE4C-205ENST00000593594 SNAPC4Q5SXM2 1469 aa34.06■■■■□ 3.04
PDE4C-205ENST00000593594 CHMP7Q8WUX9 453 aaPredicted RBP33.96■■■■□ 3.03
PDE4C-205ENST00000593594 MAGI1Q96QZ7 1491 aaPredicted RBP33.95■■■■□ 3.03
PDE4C-205ENST00000593594 GRIN2BQ13224 1484 aa33.95■■■■□ 3.02
PDE4C-205ENST00000593594 CLASP1Q7Z460 1538 aa33.94■■■■□ 3.02
PDE4C-205ENST00000593594 TRHP20396 242 aaPredicted RBP33.93■■■■□ 3.02
PDE4C-205ENST00000593594 SYNJ1O43426 1573 aa33.89■■■■□ 3.02
PDE4C-205ENST00000593594 SYNJ2O15056 1496 aa33.85■■■■□ 3.01
PDE4C-205ENST00000593594 GAPVD1Q14C86 1478 aa33.8■■■■□ 3
PDE4C-205ENST00000593594 PBRM1Q86U86 1689 aa33.76■■■□□ 2.99
PDE4C-205ENST00000593594 ABCA10Q8WWZ4 1543 aa33.73■■■□□ 2.99
PDE4C-205ENST00000593594 SUPT5HO00267 1087 aaKnown RBP33.71■■■□□ 2.99
PDE4C-205ENST00000593594 ABCA5Q8WWZ7 1642 aa33.68■■■□□ 2.98
PDE4C-205ENST00000593594 WRNQ14191 1432 aaPredicted RBP eCLIP33.56■■■□□ 2.96
PDE4C-205ENST00000593594 GRIN2AQ12879 1464 aa33.5■■■□□ 2.95
PDE4C-205ENST00000593594 TOP2BQ02880 1626 aa33.45■■■□□ 2.95
PDE4C-205ENST00000593594 ADAMTS12P58397 1594 aa33.44■■■□□ 2.94
PDE4C-205ENST00000593594 BIVM-ERCC5R4GMW8 1640 aa33.44■■■□□ 2.94
PDE4C-205ENST00000593594 NUP160Q12769 1436 aa33.41■■■□□ 2.94
PDE4C-205ENST00000593594 ERCC6L2Q5T890 1561 aa33.4■■■□□ 2.94
PDE4C-205ENST00000593594 CEP170Q5SW79 1584 aa33.39■■■□□ 2.94
PDE4C-205ENST00000593594 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
PDE4C-205ENST00000593594 ERICH3Q5RHP9 1530 aa33.29■■■□□ 2.92
PDE4C-205ENST00000593594 SHROOM2Q13796 1616 aa33.27■■■□□ 2.92
PDE4C-205ENST00000593594 PRG4Q92954 1404 aaPredicted RBP33.11■■■□□ 2.89
PDE4C-205ENST00000593594 AEBP2Q6ZN18 517 aaPredicted RBP33.09■■■□□ 2.89
PDE4C-205ENST00000593594 JPH4Q96JJ6 628 aa33.08■■■□□ 2.89
PDE4C-205ENST00000593594 RUSC2Q8N2Y8 1516 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms