RNA–Protein interactions for RNA: ENST00000593591.5

SH3GL1-203, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 4

Gene SH3GL1, Length 1,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-203ENST00000593591 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
SH3GL1-203ENST00000593591 CCDC180Q9P1Z9 1646 aa31.27■■■□□ 2.6
SH3GL1-203ENST00000593591 ABCC9O60706 1549 aa30.95■■■□□ 2.55
SH3GL1-203ENST00000593591 RB1CC1Q8TDY2 1594 aa29.61■■■□□ 2.33
SH3GL1-203ENST00000593591 NACADO15069 1562 aa29.49■■■□□ 2.31
SH3GL1-203ENST00000593591 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
SH3GL1-203ENST00000593591 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.27
SH3GL1-203ENST00000593591 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
SH3GL1-203ENST00000593591 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
SH3GL1-203ENST00000593591 UNC13AQ9UPW8 1703 aa28.93■■■□□ 2.22
SH3GL1-203ENST00000593591 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
SH3GL1-203ENST00000593591 DNAJC5BQ9UF47 199 aa28.74■■■□□ 2.19
SH3GL1-203ENST00000593591 BICRAQ9NZM4 1560 aa28.74■■■□□ 2.19
SH3GL1-203ENST00000593591 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
SH3GL1-203ENST00000593591 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
SH3GL1-203ENST00000593591 EIF4G1Q04637 1599 aaKnown RBP28■■■□□ 2.07
SH3GL1-203ENST00000593591 CC2D2AQ9P2K1 1620 aa27.98■■■□□ 2.07
SH3GL1-203ENST00000593591 CECR2Q9BXF3 1484 aa27.85■■■□□ 2.05
SH3GL1-203ENST00000593591 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
SH3GL1-203ENST00000593591 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
SH3GL1-203ENST00000593591 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
SH3GL1-203ENST00000593591 BAZ1AQ9NRL2 1556 aaPredicted RBP27.15■■□□□ 1.94
SH3GL1-203ENST00000593591 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
SH3GL1-203ENST00000593591 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
SH3GL1-203ENST00000593591 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
SH3GL1-203ENST00000593591 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
SH3GL1-203ENST00000593591 BAZ1BQ9UIG0 1483 aaKnown RBP26.93■■□□□ 1.9
SH3GL1-203ENST00000593591 ERCC6Q03468 1493 aa26.7■■□□□ 1.87
SH3GL1-203ENST00000593591 NESP48681 1621 aa26.68■■□□□ 1.86
SH3GL1-203ENST00000593591 WIZO95785 1651 aa26.66■■□□□ 1.86
SH3GL1-203ENST00000593591 LAMC3Q9Y6N6 1575 aa26.55■■□□□ 1.84
SH3GL1-203ENST00000593591 CUX2O14529 1486 aa26.55■■□□□ 1.84
SH3GL1-203ENST00000593591 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
SH3GL1-203ENST00000593591 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
SH3GL1-203ENST00000593591 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.82
SH3GL1-203ENST00000593591 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
SH3GL1-203ENST00000593591 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
SH3GL1-203ENST00000593591 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
SH3GL1-203ENST00000593591 CFTRP13569 1480 aa26.17■■□□□ 1.78
SH3GL1-203ENST00000593591 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
SH3GL1-203ENST00000593591 MRC2Q9UBG0 1479 aa26.15■■□□□ 1.78
SH3GL1-203ENST00000593591 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
SH3GL1-203ENST00000593591 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
SH3GL1-203ENST00000593591 WDR62O43379 1518 aa26.07■■□□□ 1.76
SH3GL1-203ENST00000593591 CCDC88BA6NC98 1476 aa26.05■■□□□ 1.76
SH3GL1-203ENST00000593591 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
SH3GL1-203ENST00000593591 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
SH3GL1-203ENST00000593591 TOPBP1Q92547 1522 aa25.65■■□□□ 1.7
SH3GL1-203ENST00000593591 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
SH3GL1-203ENST00000593591 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
SH3GL1-203ENST00000593591 DNMBPQ6XZF7 1577 aa25.59■■□□□ 1.69
SH3GL1-203ENST00000593591 IFT140Q96RY7 1462 aa25.58■■□□□ 1.69
SH3GL1-203ENST00000593591 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
SH3GL1-203ENST00000593591 POLA1P09884 1462 aaPredicted RBP25.41■■□□□ 1.66
SH3GL1-203ENST00000593591 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
SH3GL1-203ENST00000593591 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
SH3GL1-203ENST00000593591 EIF4G3O43432 1585 aaKnown RBP25.38■■□□□ 1.65
SH3GL1-203ENST00000593591 CUX1P39880 1505 aa25.32■■□□□ 1.64
SH3GL1-203ENST00000593591 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
SH3GL1-203ENST00000593591 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.642e-7■■■■■ 27.8
SH3GL1-203ENST00000593591 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
SH3GL1-203ENST00000593591 SOGA1O94964 1423 aa25.29■■□□□ 1.64
SH3GL1-203ENST00000593591 TDRD9Q8NDG6 1382 aaKnown RBP25.19■■□□□ 1.62
SH3GL1-203ENST00000593591 WDR97A6NE52 1622 aa25.17■■□□□ 1.62
SH3GL1-203ENST00000593591 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
SH3GL1-203ENST00000593591 CHD1O14646 1710 aa25.12■■□□□ 1.61
SH3GL1-203ENST00000593591 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
SH3GL1-203ENST00000593591 FBLN2P98095 1184 aa25.06■■□□□ 1.6
SH3GL1-203ENST00000593591 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
SH3GL1-203ENST00000593591 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
SH3GL1-203ENST00000593591 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
SH3GL1-203ENST00000593591 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
SH3GL1-203ENST00000593591 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
SH3GL1-203ENST00000593591 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
SH3GL1-203ENST00000593591 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
SH3GL1-203ENST00000593591 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
SH3GL1-203ENST00000593591 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
SH3GL1-203ENST00000593591 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
SH3GL1-203ENST00000593591 SYNJ1O43426 1573 aa24.99■■□□□ 1.59
SH3GL1-203ENST00000593591 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
SH3GL1-203ENST00000593591 PBRM1Q86U86 1689 aa24.97■■□□□ 1.59
SH3GL1-203ENST00000593591 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
SH3GL1-203ENST00000593591 CHMP7Q8WUX9 453 aaPredicted RBP24.94■■□□□ 1.58
SH3GL1-203ENST00000593591 SYNJ2O15056 1496 aa24.92■■□□□ 1.58
SH3GL1-203ENST00000593591 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
SH3GL1-203ENST00000593591 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
SH3GL1-203ENST00000593591 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
SH3GL1-203ENST00000593591 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
SH3GL1-203ENST00000593591 ERICH3Q5RHP9 1530 aa24.72■■□□□ 1.55
SH3GL1-203ENST00000593591 GRIN2AQ12879 1464 aa24.72■■□□□ 1.55
SH3GL1-203ENST00000593591 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
SH3GL1-203ENST00000593591 NUP160Q12769 1436 aa24.63■■□□□ 1.53
SH3GL1-203ENST00000593591 CEP170Q5SW79 1584 aa24.62■■□□□ 1.53
SH3GL1-203ENST00000593591 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
SH3GL1-203ENST00000593591 ERCC6L2Q5T890 1561 aa24.49■■□□□ 1.51
SH3GL1-203ENST00000593591 SHROOM2Q13796 1616 aa24.49■■□□□ 1.51
SH3GL1-203ENST00000593591 IGF1RP08069 1367 aa24.48■■□□□ 1.51
SH3GL1-203ENST00000593591 CUL7Q14999 1698 aa24.43■■□□□ 1.5
SH3GL1-203ENST00000593591 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
SH3GL1-203ENST00000593591 TRHP20396 242 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms