RNA–Protein interactions for RNA: ENST00000593483.1

RCN3-202, Transcript of reticulocalbin 3, humanhuman

TSL 5

Gene RCN3, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN3-202ENST00000593483 NISCHQ9Y2I1 1504 aa39.07■■■■□ 3.84
RCN3-202ENST00000593483 CCDC180Q9P1Z9 1646 aa34.94■■■■□ 3.18
RCN3-202ENST00000593483 ABCC9O60706 1549 aa34.67■■■■□ 3.14
RCN3-202ENST00000593483 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
RCN3-202ENST00000593483 NACADO15069 1562 aa32.87■■■□□ 2.85
RCN3-202ENST00000593483 MYO15BQ96JP2 1530 aa32.66■■■□□ 2.82
RCN3-202ENST00000593483 DCAF8L2P0C7V8 631 aa32.53■■■□□ 2.8
RCN3-202ENST00000593483 ZCCHC6Q5VYS8 1495 aaKnown RBP32.53■■■□□ 2.8
RCN3-202ENST00000593483 DNAJC5BQ9UF47 199 aa32.49■■■□□ 2.79
RCN3-202ENST00000593483 DCAF1Q9Y4B6 1507 aa32.4■■■□□ 2.78
RCN3-202ENST00000593483 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
RCN3-202ENST00000593483 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.752e-7■■■■■ 35.3
RCN3-202ENST00000593483 BICRAQ9NZM4 1560 aa32.03■■■□□ 2.72
RCN3-202ENST00000593483 SCRIBQ14160 1630 aa31.75■■■□□ 2.67
RCN3-202ENST00000593483 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
RCN3-202ENST00000593483 CC2D2AQ9P2K1 1620 aa31.32■■■□□ 2.6
RCN3-202ENST00000593483 EIF4G1Q04637 1599 aaKnown RBP31.25■■■□□ 2.59
RCN3-202ENST00000593483 CECR2Q9BXF3 1484 aa31.21■■■□□ 2.59
RCN3-202ENST00000593483 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
RCN3-202ENST00000593483 NCAPD3P42695 1498 aa30.32■■■□□ 2.44
RCN3-202ENST00000593483 BAZ1AQ9NRL2 1556 aaPredicted RBP30.3■■■□□ 2.44
RCN3-202ENST00000593483 ATAD2BQ9ULI0 1458 aa30.28■■■□□ 2.44
RCN3-202ENST00000593483 SMARCA2P51531 1590 aa30.24■■■□□ 2.43
RCN3-202ENST00000593483 HMGXB3Q12766 1538 aa30.19■■■□□ 2.42
RCN3-202ENST00000593483 PEG3Q9GZU2 1588 aa30.17■■■□□ 2.42
RCN3-202ENST00000593483 MROH2BQ7Z745 1585 aa30.09■■■□□ 2.41
RCN3-202ENST00000593483 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
RCN3-202ENST00000593483 ERCC6Q03468 1493 aa29.94■■■□□ 2.38
RCN3-202ENST00000593483 CUX2O14529 1486 aa29.86■■■□□ 2.37
RCN3-202ENST00000593483 DNAJC5Q9H3Z4 198 aa29.81■■■□□ 2.36
RCN3-202ENST00000593483 NESP48681 1621 aa29.79■■■□□ 2.36
RCN3-202ENST00000593483 WIZO95785 1651 aa29.74■■■□□ 2.35
RCN3-202ENST00000593483 RSF1Q96T23 1441 aaPredicted RBP29.63■■■□□ 2.33
RCN3-202ENST00000593483 LAMC3Q9Y6N6 1575 aa29.57■■■□□ 2.32
RCN3-202ENST00000593483 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
RCN3-202ENST00000593483 KIF21AQ7Z4S6 1674 aa29.46■■■□□ 2.31
RCN3-202ENST00000593483 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.3
RCN3-202ENST00000593483 CADPSQ9ULU8 1353 aa29.37■■■□□ 2.29
RCN3-202ENST00000593483 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
RCN3-202ENST00000593483 CFTRP13569 1480 aa29.19■■■□□ 2.26
RCN3-202ENST00000593483 MRC2Q9UBG0 1479 aa29.12■■■□□ 2.25
RCN3-202ENST00000593483 WDR62O43379 1518 aa29.07■■■□□ 2.24
RCN3-202ENST00000593483 CCDC88BA6NC98 1476 aa29.04■■■□□ 2.24
RCN3-202ENST00000593483 FANCD2Q9BXW9 1451 aa29.04■■■□□ 2.24
RCN3-202ENST00000593483 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
RCN3-202ENST00000593483 PRDM2Q13029 1718 aa29■■■□□ 2.23
RCN3-202ENST00000593483 URB2Q14146 1524 aaKnown RBP28.8■■■□□ 2.2
RCN3-202ENST00000593483 TRIM41Q8WV44 630 aa28.58■■■□□ 2.17
RCN3-202ENST00000593483 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
RCN3-202ENST00000593483 ABCC8Q09428 1581 aa28.54■■■□□ 2.16
RCN3-202ENST00000593483 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
RCN3-202ENST00000593483 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
RCN3-202ENST00000593483 IFT140Q96RY7 1462 aa28.46■■■□□ 2.15
RCN3-202ENST00000593483 OSCARQ8IYS5 282 aa28.43■■■□□ 2.14
RCN3-202ENST00000593483 ZNF608Q9ULD9 1512 aaPredicted RBP28.4■■■□□ 2.14
RCN3-202ENST00000593483 TARBP1Q13395 1621 aaKnown RBP28.32■■■□□ 2.12
RCN3-202ENST00000593483 POLA1P09884 1462 aaPredicted RBP28.32■■■□□ 2.12
RCN3-202ENST00000593483 EIF4G3O43432 1585 aaKnown RBP28.28■■■□□ 2.12
RCN3-202ENST00000593483 CUX1P39880 1505 aa28.26■■■□□ 2.11
RCN3-202ENST00000593483 RIMBP3CA6NJZ7 1639 aa28.18■■■□□ 2.1
RCN3-202ENST00000593483 RIMBP3BA6NNM3 1639 aa28.18■■■□□ 2.1
RCN3-202ENST00000593483 RIMBP3Q9UFD9 1639 aa28.18■■■□□ 2.1
RCN3-202ENST00000593483 FGD5Q6ZNL6 1462 aa28.18■■■□□ 2.1
RCN3-202ENST00000593483 RAD54L2Q9Y4B4 1467 aa28.14■■■□□ 2.09
RCN3-202ENST00000593483 WDR97A6NE52 1622 aa28.13■■■□□ 2.09
RCN3-202ENST00000593483 AQRO60306 1485 aaKnown RBP eCLIP28.12■■■□□ 2.09
RCN3-202ENST00000593483 SOGA1O94964 1423 aa28.11■■■□□ 2.09
RCN3-202ENST00000593483 CHD1O14646 1710 aa28.11■■■□□ 2.09
RCN3-202ENST00000593483 ARHGEF11O15085 1522 aa28.07■■■□□ 2.08
RCN3-202ENST00000593483 BIVM-ERCC5R4GMW8 1640 aa27.99■■■□□ 2.07
RCN3-202ENST00000593483 TDRD9Q8NDG6 1382 aaKnown RBP27.98■■■□□ 2.07
RCN3-202ENST00000593483 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
RCN3-202ENST00000593483 ABCA10Q8WWZ4 1543 aa27.93■■■□□ 2.06
RCN3-202ENST00000593483 FBLN2P98095 1184 aa27.93■■■□□ 2.06
RCN3-202ENST00000593483 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
RCN3-202ENST00000593483 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
RCN3-202ENST00000593483 ABCA5Q8WWZ7 1642 aa27.89■■■□□ 2.05
RCN3-202ENST00000593483 GRIN2BQ13224 1484 aa27.88■■■□□ 2.05
RCN3-202ENST00000593483 SNAPC4Q5SXM2 1469 aa27.87■■■□□ 2.05
RCN3-202ENST00000593483 MAGI1Q96QZ7 1491 aaPredicted RBP27.86■■■□□ 2.05
RCN3-202ENST00000593483 PBRM1Q86U86 1689 aa27.84■■■□□ 2.05
RCN3-202ENST00000593483 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.04
RCN3-202ENST00000593483 CYB5RLQ6IPT4 315 aa27.81■■■□□ 2.04
RCN3-202ENST00000593483 ARAP1Q96P48 1450 aa27.8■■■□□ 2.04
RCN3-202ENST00000593483 SYNJ2O15056 1496 aa27.75■■■□□ 2.03
RCN3-202ENST00000593483 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
RCN3-202ENST00000593483 CHMP7Q8WUX9 453 aaPredicted RBP27.69■■■□□ 2.02
RCN3-202ENST00000593483 ADAMTS12P58397 1594 aa27.62■■■□□ 2.01
RCN3-202ENST00000593483 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
RCN3-202ENST00000593483 GRIN2AQ12879 1464 aa27.53■■■□□ 2
RCN3-202ENST00000593483 TRHP20396 242 aaPredicted RBP27.52■■■□□ 2
RCN3-202ENST00000593483 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
RCN3-202ENST00000593483 NUP160Q12769 1436 aa27.45■■□□□ 1.98
RCN3-202ENST00000593483 CEP170Q5SW79 1584 aa27.42■■□□□ 1.98
RCN3-202ENST00000593483 KIF27Q86VH2 1401 aa27.35■■□□□ 1.97
RCN3-202ENST00000593483 ERCC6L2Q5T890 1561 aa27.32■■□□□ 1.96
RCN3-202ENST00000593483 SHROOM2Q13796 1616 aa27.31■■□□□ 1.96
RCN3-202ENST00000593483 CUL7Q14999 1698 aa27.3■■□□□ 1.96
RCN3-202ENST00000593483 IGF1RP08069 1367 aa27.28■■□□□ 1.96
RCN3-202ENST00000593483 RUSC2Q8N2Y8 1516 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms