RNA–Protein interactions for RNA: ENST00000593383.1

SHD-202, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 3

Gene SHD, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-202ENST00000593383 NISCHQ9Y2I1 1504 aa30.16■■■□□ 2.42
SHD-202ENST00000593383 ABCC9O60706 1549 aa27.47■■□□□ 1.99
SHD-202ENST00000593383 CCDC180Q9P1Z9 1646 aa27.26■■□□□ 1.95
SHD-202ENST00000593383 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
SHD-202ENST00000593383 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
SHD-202ENST00000593383 NACADO15069 1562 aa25.86■■□□□ 1.73
SHD-202ENST00000593383 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
SHD-202ENST00000593383 PABPN1Q86U42 306 aaKnown RBP eCLIP25.5■■□□□ 1.67
SHD-202ENST00000593383 MYO15BQ96JP2 1530 aa25.44■■□□□ 1.66
SHD-202ENST00000593383 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.65
SHD-202ENST00000593383 BICRAQ9NZM4 1560 aa25.25■■□□□ 1.63
SHD-202ENST00000593383 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.6
SHD-202ENST00000593383 DCAF1Q9Y4B6 1507 aa24.96■■□□□ 1.59
SHD-202ENST00000593383 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
SHD-202ENST00000593383 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
SHD-202ENST00000593383 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.56
SHD-202ENST00000593383 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
SHD-202ENST00000593383 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
SHD-202ENST00000593383 DNAJC5Q9H3Z4 198 aa24.24■■□□□ 1.47
SHD-202ENST00000593383 CUX2O14529 1486 aa23.94■■□□□ 1.42
SHD-202ENST00000593383 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
SHD-202ENST00000593383 ERCC6Q03468 1493 aa23.82■■□□□ 1.4
SHD-202ENST00000593383 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
SHD-202ENST00000593383 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
SHD-202ENST00000593383 HMGXB3Q12766 1538 aa23.66■■□□□ 1.38
SHD-202ENST00000593383 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
SHD-202ENST00000593383 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
SHD-202ENST00000593383 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
SHD-202ENST00000593383 NESP48681 1621 aa23.47■■□□□ 1.35
SHD-202ENST00000593383 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
SHD-202ENST00000593383 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
SHD-202ENST00000593383 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
SHD-202ENST00000593383 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
SHD-202ENST00000593383 KIF21AQ7Z4S6 1674 aa23.18■■□□□ 1.3
SHD-202ENST00000593383 MROH2BQ7Z745 1585 aa23.17■■□□□ 1.3
SHD-202ENST00000593383 CADPSQ9ULU8 1353 aa23.11■■□□□ 1.29
SHD-202ENST00000593383 MRC2Q9UBG0 1479 aa23.05■■□□□ 1.28
SHD-202ENST00000593383 WDR62O43379 1518 aa23.01■■□□□ 1.27
SHD-202ENST00000593383 TRIM41Q8WV44 630 aa22.98■■□□□ 1.27
SHD-202ENST00000593383 CEP164Q9UPV0 1460 aa22.91■■□□□ 1.26
SHD-202ENST00000593383 WIZO95785 1651 aa22.87■■□□□ 1.25
SHD-202ENST00000593383 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
SHD-202ENST00000593383 OSCARQ8IYS5 282 aa22.77■■□□□ 1.24
SHD-202ENST00000593383 CFTRP13569 1480 aa22.77■■□□□ 1.24
SHD-202ENST00000593383 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
SHD-202ENST00000593383 URB2Q14146 1524 aaKnown RBP22.61■■□□□ 1.21
SHD-202ENST00000593383 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
SHD-202ENST00000593383 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
SHD-202ENST00000593383 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
SHD-202ENST00000593383 RIMBP3CA6NJZ7 1639 aa22.43■■□□□ 1.18
SHD-202ENST00000593383 RIMBP3BA6NNM3 1639 aa22.43■■□□□ 1.18
SHD-202ENST00000593383 RIMBP3Q9UFD9 1639 aa22.43■■□□□ 1.18
SHD-202ENST00000593383 ABCC8Q09428 1581 aa22.39■■□□□ 1.18
SHD-202ENST00000593383 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
SHD-202ENST00000593383 ARHGEF11O15085 1522 aa22.35■■□□□ 1.17
SHD-202ENST00000593383 TOPBP1Q92547 1522 aa22.34■■□□□ 1.17
SHD-202ENST00000593383 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
SHD-202ENST00000593383 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
SHD-202ENST00000593383 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
SHD-202ENST00000593383 CYB5RLQ6IPT4 315 aa22.2■■□□□ 1.14
SHD-202ENST00000593383 TARBP1Q13395 1621 aaKnown RBP22.15■■□□□ 1.14
SHD-202ENST00000593383 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.14
SHD-202ENST00000593383 CHD1O14646 1710 aa22.14■■□□□ 1.13
SHD-202ENST00000593383 FBLN2P98095 1184 aa22.1■■□□□ 1.13
SHD-202ENST00000593383 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
SHD-202ENST00000593383 TRHP20396 242 aaPredicted RBP22.09■■□□□ 1.13
SHD-202ENST00000593383 ARAP1Q96P48 1450 aa22.08■■□□□ 1.12
SHD-202ENST00000593383 WDR97A6NE52 1622 aa22.04■■□□□ 1.12
SHD-202ENST00000593383 SOGA1O94964 1423 aa22.01■■□□□ 1.11
SHD-202ENST00000593383 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
SHD-202ENST00000593383 TDRD9Q8NDG6 1382 aaKnown RBP21.96■■□□□ 1.11
SHD-202ENST00000593383 SYNJ1O43426 1573 aa21.94■■□□□ 1.1
SHD-202ENST00000593383 SNAPC4Q5SXM2 1469 aa21.93■■□□□ 1.1
SHD-202ENST00000593383 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
SHD-202ENST00000593383 MAGI1Q96QZ7 1491 aaPredicted RBP21.93■■□□□ 1.1
SHD-202ENST00000593383 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
SHD-202ENST00000593383 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
SHD-202ENST00000593383 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
SHD-202ENST00000593383 SYNJ2O15056 1496 aa21.85■■□□□ 1.09
SHD-202ENST00000593383 CUX1P39880 1505 aa21.79■■□□□ 1.08
SHD-202ENST00000593383 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
SHD-202ENST00000593383 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
SHD-202ENST00000593383 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
SHD-202ENST00000593383 ABCA10Q8WWZ4 1543 aa21.67■■□□□ 1.06
SHD-202ENST00000593383 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
SHD-202ENST00000593383 ABCA5Q8WWZ7 1642 aa21.64■■□□□ 1.05
SHD-202ENST00000593383 GRIN2AQ12879 1464 aa21.58■■□□□ 1.04
SHD-202ENST00000593383 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
SHD-202ENST00000593383 NUP160Q12769 1436 aa21.52■■□□□ 1.04
SHD-202ENST00000593383 ADAMTS12P58397 1594 aa21.5■■□□□ 1.03
SHD-202ENST00000593383 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
SHD-202ENST00000593383 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
SHD-202ENST00000593383 ERCC6L2Q5T890 1561 aa21.46■■□□□ 1.03
SHD-202ENST00000593383 SHROOM2Q13796 1616 aa21.45■■□□□ 1.02
SHD-202ENST00000593383 TOP2BQ02880 1626 aa21.42■■□□□ 1.02
SHD-202ENST00000593383 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
SHD-202ENST00000593383 BIVM-ERCC5R4GMW8 1640 aa21.4■■□□□ 1.02
SHD-202ENST00000593383 PRG4Q92954 1404 aaPredicted RBP21.33■■□□□ 1.01
SHD-202ENST00000593383 JPH4Q96JJ6 628 aa21.3■■□□□ 1
SHD-202ENST00000593383 KIF13AQ9H1H9 1805 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms