RNA–Protein interactions for RNA: ENST00000593363.1

PRKD2-203, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-203ENST00000593363 NISCHQ9Y2I1 1504 aa37.59■■■■□ 3.61
PRKD2-203ENST00000593363 ABCC9O60706 1549 aa34.09■■■■□ 3.05
PRKD2-203ENST00000593363 CCDC180Q9P1Z9 1646 aa33.89■■■■□ 3.02
PRKD2-203ENST00000593363 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
PRKD2-203ENST00000593363 DNAJC5BQ9UF47 199 aa32.24■■■□□ 2.75
PRKD2-203ENST00000593363 NACADO15069 1562 aa32.09■■■□□ 2.73
PRKD2-203ENST00000593363 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
PRKD2-203ENST00000593363 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
PRKD2-203ENST00000593363 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
PRKD2-203ENST00000593363 MYO15BQ96JP2 1530 aa31.56■■■□□ 2.64
PRKD2-203ENST00000593363 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
PRKD2-203ENST00000593363 ZCCHC6Q5VYS8 1495 aaKnown RBP31.09■■■□□ 2.57
PRKD2-203ENST00000593363 DCAF1Q9Y4B6 1507 aa31.05■■■□□ 2.56
PRKD2-203ENST00000593363 SHROOM4Q9ULL8 1493 aa30.99■■■□□ 2.55
PRKD2-203ENST00000593363 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
PRKD2-203ENST00000593363 CC2D2AQ9P2K1 1620 aa30.82■■■□□ 2.52
PRKD2-203ENST00000593363 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.51
PRKD2-203ENST00000593363 EIF4G1Q04637 1599 aaKnown RBP30.68■■■□□ 2.5
PRKD2-203ENST00000593363 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
PRKD2-203ENST00000593363 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
PRKD2-203ENST00000593363 CUX2O14529 1486 aa29.52■■■□□ 2.32
PRKD2-203ENST00000593363 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
PRKD2-203ENST00000593363 ERCC6Q03468 1493 aa29.46■■■□□ 2.31
PRKD2-203ENST00000593363 SMARCA2P51531 1590 aa29.39■■■□□ 2.3
PRKD2-203ENST00000593363 SMARCA4P51532 1647 aa29.39■■■□□ 2.3
PRKD2-203ENST00000593363 HMGXB3Q12766 1538 aa29.37■■■□□ 2.29
PRKD2-203ENST00000593363 NESP48681 1621 aa29.22■■■□□ 2.27
PRKD2-203ENST00000593363 BAZ1AQ9NRL2 1556 aaPredicted RBP29.19■■■□□ 2.26
PRKD2-203ENST00000593363 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
PRKD2-203ENST00000593363 PEG3Q9GZU2 1588 aa29.12■■■□□ 2.25
PRKD2-203ENST00000593363 THOC2Q8NI27 1593 aaKnown RBP29■■■□□ 2.23
PRKD2-203ENST00000593363 LAMC3Q9Y6N6 1575 aa29■■■□□ 2.23
PRKD2-203ENST00000593363 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
PRKD2-203ENST00000593363 KIF21AQ7Z4S6 1674 aa28.87■■■□□ 2.21
PRKD2-203ENST00000593363 PDS5BQ9NTI5 1447 aa28.82■■■□□ 2.2
PRKD2-203ENST00000593363 CADPSQ9ULU8 1353 aa28.69■■■□□ 2.18
PRKD2-203ENST00000593363 WIZO95785 1651 aa28.61■■■□□ 2.17
PRKD2-203ENST00000593363 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
PRKD2-203ENST00000593363 WDR62O43379 1518 aa28.54■■■□□ 2.16
PRKD2-203ENST00000593363 CEP164Q9UPV0 1460 aa28.42■■■□□ 2.14
PRKD2-203ENST00000593363 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
PRKD2-203ENST00000593363 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
PRKD2-203ENST00000593363 CFTRP13569 1480 aa28.31■■■□□ 2.12
PRKD2-203ENST00000593363 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
PRKD2-203ENST00000593363 TOP2AP11388 1531 aaKnown RBP28.22■■■□□ 2.11
PRKD2-203ENST00000593363 URB2Q14146 1524 aaKnown RBP28.15■■■□□ 2.1
PRKD2-203ENST00000593363 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
PRKD2-203ENST00000593363 PRDM2Q13029 1718 aa28.08■■■□□ 2.09
PRKD2-203ENST00000593363 CCDC88BA6NC98 1476 aa27.89■■■□□ 2.06
PRKD2-203ENST00000593363 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
PRKD2-203ENST00000593363 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
PRKD2-203ENST00000593363 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
PRKD2-203ENST00000593363 RIMBP3CA6NJZ7 1639 aa27.8■■■□□ 2.04
PRKD2-203ENST00000593363 RIMBP3BA6NNM3 1639 aa27.8■■■□□ 2.04
PRKD2-203ENST00000593363 RIMBP3Q9UFD9 1639 aa27.8■■■□□ 2.04
PRKD2-203ENST00000593363 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
PRKD2-203ENST00000593363 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
PRKD2-203ENST00000593363 DNMBPQ6XZF7 1577 aa27.68■■■□□ 2.02
PRKD2-203ENST00000593363 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
PRKD2-203ENST00000593363 TARBP1Q13395 1621 aaKnown RBP27.59■■■□□ 2.01
PRKD2-203ENST00000593363 CHD1O14646 1710 aa27.57■■■□□ 2
PRKD2-203ENST00000593363 AQRO60306 1485 aaKnown RBP eCLIP27.55■■■□□ 2
PRKD2-203ENST00000593363 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
PRKD2-203ENST00000593363 CYB5RLQ6IPT4 315 aa27.47■■□□□ 1.99
PRKD2-203ENST00000593363 FBLN2P98095 1184 aa27.4■■□□□ 1.98
PRKD2-203ENST00000593363 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
PRKD2-203ENST00000593363 ARAP1Q96P48 1450 aa27.38■■□□□ 1.97
PRKD2-203ENST00000593363 SOGA1O94964 1423 aa27.36■■□□□ 1.97
PRKD2-203ENST00000593363 TDRD9Q8NDG6 1382 aaKnown RBP27.34■■□□□ 1.97
PRKD2-203ENST00000593363 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
PRKD2-203ENST00000593363 FGD5Q6ZNL6 1462 aa27.28■■□□□ 1.96
PRKD2-203ENST00000593363 SNAPC4Q5SXM2 1469 aa27.26■■□□□ 1.95
PRKD2-203ENST00000593363 TRHP20396 242 aaPredicted RBP27.24■■□□□ 1.95
PRKD2-203ENST00000593363 CUX1P39880 1505 aa27.22■■□□□ 1.95
PRKD2-203ENST00000593363 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
PRKD2-203ENST00000593363 MAGI1Q96QZ7 1491 aaPredicted RBP27.2■■□□□ 1.95
PRKD2-203ENST00000593363 CHMP7Q8WUX9 453 aaPredicted RBP27.18■■□□□ 1.94
PRKD2-203ENST00000593363 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
PRKD2-203ENST00000593363 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
PRKD2-203ENST00000593363 SYNJ2O15056 1496 aa27.11■■□□□ 1.93
PRKD2-203ENST00000593363 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
PRKD2-203ENST00000593363 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
PRKD2-203ENST00000593363 ABCA10Q8WWZ4 1543 aa26.97■■□□□ 1.91
PRKD2-203ENST00000593363 ABCA5Q8WWZ7 1642 aa26.96■■□□□ 1.91
PRKD2-203ENST00000593363 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
PRKD2-203ENST00000593363 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
PRKD2-203ENST00000593363 ADAMTS12P58397 1594 aa26.77■■□□□ 1.88
PRKD2-203ENST00000593363 ERCC6L2Q5T890 1561 aa26.76■■□□□ 1.87
PRKD2-203ENST00000593363 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
PRKD2-203ENST00000593363 NUP160Q12769 1436 aa26.74■■□□□ 1.87
PRKD2-203ENST00000593363 BIVM-ERCC5R4GMW8 1640 aa26.74■■□□□ 1.87
PRKD2-203ENST00000593363 CEP170Q5SW79 1584 aa26.74■■□□□ 1.87
PRKD2-203ENST00000593363 TOP2BQ02880 1626 aa26.72■■□□□ 1.87
PRKD2-203ENST00000593363 FHAD1B1AJZ9 1412 aa26.68■■□□□ 1.86
PRKD2-203ENST00000593363 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
PRKD2-203ENST00000593363 AEBP2Q6ZN18 517 aaPredicted RBP26.65■■□□□ 1.86
PRKD2-203ENST00000593363 ERICH3Q5RHP9 1530 aa26.63■■□□□ 1.85
PRKD2-203ENST00000593363 KIF13AQ9H1H9 1805 aa26.5■■□□□ 1.83
PRKD2-203ENST00000593363 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
PRKD2-203ENST00000593363 JPH4Q96JJ6 628 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms