RNA–Protein interactions for RNA: ENST00000593361.5

DDX49-202, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-202ENST00000593361 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
DDX49-202ENST00000593361 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
DDX49-202ENST00000593361 ABCC9O60706 1549 aa26.3■■□□□ 1.8
DDX49-202ENST00000593361 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
DDX49-202ENST00000593361 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
DDX49-202ENST00000593361 NACADO15069 1562 aa25.52■■□□□ 1.68
DDX49-202ENST00000593361 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
DDX49-202ENST00000593361 MYO15BQ96JP2 1530 aa25.48■■□□□ 1.67
DDX49-202ENST00000593361 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
DDX49-202ENST00000593361 UNC13AQ9UPW8 1703 aa24.97■■□□□ 1.59
DDX49-202ENST00000593361 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
DDX49-202ENST00000593361 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
DDX49-202ENST00000593361 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
DDX49-202ENST00000593361 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
DDX49-202ENST00000593361 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
DDX49-202ENST00000593361 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
DDX49-202ENST00000593361 BAZ1AQ9NRL2 1556 aaPredicted RBP23.88■■□□□ 1.41
DDX49-202ENST00000593361 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
DDX49-202ENST00000593361 CC2D2AQ9P2K1 1620 aa23.83■■□□□ 1.41
DDX49-202ENST00000593361 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
DDX49-202ENST00000593361 DNAJC5BQ9UF47 199 aa23.73■■□□□ 1.39
DDX49-202ENST00000593361 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
DDX49-202ENST00000593361 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
DDX49-202ENST00000593361 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
DDX49-202ENST00000593361 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
DDX49-202ENST00000593361 WIZO95785 1651 aa23.56■■□□□ 1.36
DDX49-202ENST00000593361 NCAPD3P42695 1498 aa23.52■■□□□ 1.36
DDX49-202ENST00000593361 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
DDX49-202ENST00000593361 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
DDX49-202ENST00000593361 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.32
DDX49-202ENST00000593361 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
DDX49-202ENST00000593361 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
DDX49-202ENST00000593361 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.25
DDX49-202ENST00000593361 NESP48681 1621 aa22.88■■□□□ 1.25
DDX49-202ENST00000593361 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
DDX49-202ENST00000593361 CFTRP13569 1480 aa22.81■■□□□ 1.24
DDX49-202ENST00000593361 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
DDX49-202ENST00000593361 PDS5BQ9NTI5 1447 aa22.68■■□□□ 1.22
DDX49-202ENST00000593361 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
DDX49-202ENST00000593361 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
DDX49-202ENST00000593361 FANCD2Q9BXW9 1451 aa22.62■■□□□ 1.21
DDX49-202ENST00000593361 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
DDX49-202ENST00000593361 THOC2Q8NI27 1593 aaKnown RBP22.49■■□□□ 1.19
DDX49-202ENST00000593361 MRC2Q9UBG0 1479 aa22.46■■□□□ 1.19
DDX49-202ENST00000593361 WDR62O43379 1518 aa22.38■■□□□ 1.17
DDX49-202ENST00000593361 URB2Q14146 1524 aaKnown RBP22.37■■□□□ 1.17
DDX49-202ENST00000593361 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.17
DDX49-202ENST00000593361 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
DDX49-202ENST00000593361 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
DDX49-202ENST00000593361 CUX1P39880 1505 aa22.29■■□□□ 1.16
DDX49-202ENST00000593361 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
DDX49-202ENST00000593361 CUX2O14529 1486 aa22.27■■□□□ 1.16
DDX49-202ENST00000593361 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
DDX49-202ENST00000593361 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
DDX49-202ENST00000593361 TOP2BQ02880 1626 aa22.2■■□□□ 1.15
DDX49-202ENST00000593361 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
DDX49-202ENST00000593361 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
DDX49-202ENST00000593361 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
DDX49-202ENST00000593361 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
DDX49-202ENST00000593361 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
DDX49-202ENST00000593361 SOGA1O94964 1423 aa22.02■■□□□ 1.12
DDX49-202ENST00000593361 WDR97A6NE52 1622 aa22■■□□□ 1.11
DDX49-202ENST00000593361 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
DDX49-202ENST00000593361 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
DDX49-202ENST00000593361 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
DDX49-202ENST00000593361 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
DDX49-202ENST00000593361 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
DDX49-202ENST00000593361 ABCA5Q8WWZ7 1642 aa21.87■■□□□ 1.09
DDX49-202ENST00000593361 TDRD9Q8NDG6 1382 aaKnown RBP21.86■■□□□ 1.09
DDX49-202ENST00000593361 AQRO60306 1485 aaKnown RBP eCLIP21.84■■□□□ 1.09
DDX49-202ENST00000593361 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
DDX49-202ENST00000593361 GAPVD1Q14C86 1478 aa21.8■■□□□ 1.08
DDX49-202ENST00000593361 KIF27Q86VH2 1401 aa21.76■■□□□ 1.07
DDX49-202ENST00000593361 GRIN2BQ13224 1484 aa21.75■■□□□ 1.07
DDX49-202ENST00000593361 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
DDX49-202ENST00000593361 SNAPC4Q5SXM2 1469 aa21.69■■□□□ 1.06
DDX49-202ENST00000593361 RUSC2Q8N2Y8 1516 aa21.68■■□□□ 1.06
DDX49-202ENST00000593361 MAGI1Q96QZ7 1491 aaPredicted RBP21.66■■□□□ 1.06
DDX49-202ENST00000593361 ADAMTS12P58397 1594 aa21.64■■□□□ 1.05
DDX49-202ENST00000593361 CUL7Q14999 1698 aa21.61■■□□□ 1.05
DDX49-202ENST00000593361 EEA1Q15075 1411 aa21.6■■□□□ 1.05
DDX49-202ENST00000593361 IGF1RP08069 1367 aa21.6■■□□□ 1.05
DDX49-202ENST00000593361 CHD1O14646 1710 aa21.58■■□□□ 1.05
DDX49-202ENST00000593361 SYNJ2O15056 1496 aa21.57■■□□□ 1.04
DDX49-202ENST00000593361 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
DDX49-202ENST00000593361 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
DDX49-202ENST00000593361 FBLN2P98095 1184 aa21.49■■□□□ 1.03
DDX49-202ENST00000593361 CARMIL1Q5VZK9 1371 aa21.48■■□□□ 1.03
DDX49-202ENST00000593361 GRIN2AQ12879 1464 aa21.48■■□□□ 1.03
DDX49-202ENST00000593361 CHMP7Q8WUX9 453 aaPredicted RBP21.48■■□□□ 1.03
DDX49-202ENST00000593361 CSRNP3Q8WYN3 585 aa21.46■■□□□ 1.03
DDX49-202ENST00000593361 PRXQ9BXM0 1461 aa21.45■■□□□ 1.02
DDX49-202ENST00000593361 RAPGEF2Q9Y4G8 1499 aa21.43■■□□□ 1.02
DDX49-202ENST00000593361 KIF21BO75037 1637 aa21.39■■□□□ 1.01
DDX49-202ENST00000593361 CEP170Q5SW79 1584 aa21.38■■□□□ 1.01
DDX49-202ENST00000593361 NUP160Q12769 1436 aa21.36■■□□□ 1.01
DDX49-202ENST00000593361 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
DDX49-202ENST00000593361 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
DDX49-202ENST00000593361 CTTNBP2Q8WZ74 1663 aa21.28■■□□□ 1
DDX49-202ENST00000593361 GOLGA3Q08378 1498 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms