RNA–Protein interactions for RNA: ENST00000593261.1

NEK8-208, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-208ENST00000593261 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
NEK8-208ENST00000593261 ABCC9O60706 1549 aa13.74□□□□□ -0.21
NEK8-208ENST00000593261 CCDC180Q9P1Z9 1646 aa13.37□□□□□ -0.27
NEK8-208ENST00000593261 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
NEK8-208ENST00000593261 RB1CC1Q8TDY2 1594 aa12.88□□□□□ -0.35
NEK8-208ENST00000593261 UNC13AQ9UPW8 1703 aa12.71□□□□□ -0.38
NEK8-208ENST00000593261 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
NEK8-208ENST00000593261 NACADO15069 1562 aa12.66□□□□□ -0.38
NEK8-208ENST00000593261 BICRAQ9NZM4 1560 aa12.55□□□□□ -0.4
NEK8-208ENST00000593261 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.41
NEK8-208ENST00000593261 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
NEK8-208ENST00000593261 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
NEK8-208ENST00000593261 MYO15BQ96JP2 1530 aa12.31□□□□□ -0.44
NEK8-208ENST00000593261 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
NEK8-208ENST00000593261 EIF4G1Q04637 1599 aaKnown RBP12.26□□□□□ -0.45
NEK8-208ENST00000593261 SHROOM4Q9ULL8 1493 aa12.25□□□□□ -0.45
NEK8-208ENST00000593261 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
NEK8-208ENST00000593261 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
NEK8-208ENST00000593261 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
NEK8-208ENST00000593261 CUX2O14529 1486 aa11.93□□□□□ -0.5
NEK8-208ENST00000593261 ERCC6Q03468 1493 aa11.89□□□□□ -0.51
NEK8-208ENST00000593261 NESP48681 1621 aa11.71□□□□□ -0.53
NEK8-208ENST00000593261 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
NEK8-208ENST00000593261 THOC2Q8NI27 1593 aaKnown RBP11.69□□□□□ -0.54
NEK8-208ENST00000593261 NCAPD3P42695 1498 aa11.65□□□□□ -0.54
NEK8-208ENST00000593261 SMARCA2P51531 1590 aa11.64□□□□□ -0.55
NEK8-208ENST00000593261 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
NEK8-208ENST00000593261 KIF21AQ7Z4S6 1674 aa11.61□□□□□ -0.55
NEK8-208ENST00000593261 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
NEK8-208ENST00000593261 SMARCA4P51532 1647 aa11.57□□□□□ -0.56
NEK8-208ENST00000593261 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.57
NEK8-208ENST00000593261 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
NEK8-208ENST00000593261 BAZ1AQ9NRL2 1556 aaPredicted RBP11.46□□□□□ -0.57
NEK8-208ENST00000593261 PDS5BQ9NTI5 1447 aa11.41□□□□□ -0.58
NEK8-208ENST00000593261 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
NEK8-208ENST00000593261 WDR62O43379 1518 aa11.4□□□□□ -0.59
NEK8-208ENST00000593261 MRC2Q9UBG0 1479 aa11.39□□□□□ -0.59
NEK8-208ENST00000593261 MROH2BQ7Z745 1585 aa11.33□□□□□ -0.6
NEK8-208ENST00000593261 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
NEK8-208ENST00000593261 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
NEK8-208ENST00000593261 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
NEK8-208ENST00000593261 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
NEK8-208ENST00000593261 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
NEK8-208ENST00000593261 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
NEK8-208ENST00000593261 FANCD2Q9BXW9 1451 aa11.23□□□□□ -0.61
NEK8-208ENST00000593261 WIZO95785 1651 aa11.23□□□□□ -0.61
NEK8-208ENST00000593261 ARHGEF11O15085 1522 aa11.2□□□□□ -0.62
NEK8-208ENST00000593261 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
NEK8-208ENST00000593261 ZNF608Q9ULD9 1512 aaPredicted RBP11.12□□□□□ -0.63
NEK8-208ENST00000593261 CFTRP13569 1480 aa11.11□□□□□ -0.63
NEK8-208ENST00000593261 PRDM2Q13029 1718 aa11.1□□□□□ -0.63
NEK8-208ENST00000593261 CHD1O14646 1710 aa11.09□□□□□ -0.63
NEK8-208ENST00000593261 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
NEK8-208ENST00000593261 EIF4G3O43432 1585 aaKnown RBP11.08□□□□□ -0.64
NEK8-208ENST00000593261 ARAP1Q96P48 1450 aa11.07□□□□□ -0.64
NEK8-208ENST00000593261 CYB5RLQ6IPT4 315 aa11.07□□□□□ -0.64
NEK8-208ENST00000593261 IFT140Q96RY7 1462 aa11.03□□□□□ -0.64
NEK8-208ENST00000593261 AEBP2Q6ZN18 517 aaPredicted RBP11.02□□□□□ -0.65
NEK8-208ENST00000593261 TOP2AP11388 1531 aaKnown RBP11.01□□□□□ -0.65
NEK8-208ENST00000593261 TOPBP1Q92547 1522 aa10.98□□□□□ -0.65
NEK8-208ENST00000593261 RSF1Q96T23 1441 aaPredicted RBP10.94□□□□□ -0.66
NEK8-208ENST00000593261 TARBP1Q13395 1621 aaKnown RBP10.94□□□□□ -0.66
NEK8-208ENST00000593261 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEK8-208ENST00000593261 FBLN2P98095 1184 aa10.93□□□□□ -0.66
NEK8-208ENST00000593261 DNMBPQ6XZF7 1577 aa10.92□□□□□ -0.66
NEK8-208ENST00000593261 CLASP1Q7Z460 1538 aa10.89□□□□□ -0.67
NEK8-208ENST00000593261 CCDC88BA6NC98 1476 aa10.86□□□□□ -0.67
NEK8-208ENST00000593261 POLA1P09884 1462 aaPredicted RBP10.85□□□□□ -0.67
NEK8-208ENST00000593261 SNAPC4Q5SXM2 1469 aa10.85□□□□□ -0.67
NEK8-208ENST00000593261 ABCC8Q09428 1581 aa10.84□□□□□ -0.67
NEK8-208ENST00000593261 SYNJ1O43426 1573 aa10.83□□□□□ -0.68
NEK8-208ENST00000593261 RAD54L2Q9Y4B4 1467 aa10.82□□□□□ -0.68
NEK8-208ENST00000593261 TDRD9Q8NDG6 1382 aaKnown RBP10.8□□□□□ -0.68
NEK8-208ENST00000593261 GAPVD1Q14C86 1478 aa10.77□□□□□ -0.69
NEK8-208ENST00000593261 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
NEK8-208ENST00000593261 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
NEK8-208ENST00000593261 WDR97A6NE52 1622 aa10.74□□□□□ -0.69
NEK8-208ENST00000593261 SOGA1O94964 1423 aa10.74□□□□□ -0.69
NEK8-208ENST00000593261 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
NEK8-208ENST00000593261 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
NEK8-208ENST00000593261 CHMP7Q8WUX9 453 aaPredicted RBP10.73□□□□□ -0.69
NEK8-208ENST00000593261 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
NEK8-208ENST00000593261 KIF13AQ9H1H9 1805 aa10.72□□□□□ -0.69
NEK8-208ENST00000593261 GRIN2BQ13224 1484 aa10.71□□□□□ -0.69
NEK8-208ENST00000593261 CUX1P39880 1505 aa10.68□□□□□ -0.7
NEK8-208ENST00000593261 ABCA5Q8WWZ7 1642 aa10.64□□□□□ -0.71
NEK8-208ENST00000593261 CEP170Q5SW79 1584 aa10.64□□□□□ -0.71
NEK8-208ENST00000593261 ILDR1Q86SU0 546 aaPredicted RBP10.61□□□□□ -0.71
NEK8-208ENST00000593261 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
NEK8-208ENST00000593261 GRIN2AQ12879 1464 aa10.6□□□□□ -0.71
NEK8-208ENST00000593261 SHROOM2Q13796 1616 aa10.59□□□□□ -0.71
NEK8-208ENST00000593261 TSPOAP1O95153 1857 aa10.55□□□□□ -0.72
NEK8-208ENST00000593261 KDM6BO15054 1643 aa10.55□□□□□ -0.72
NEK8-208ENST00000593261 ABCA10Q8WWZ4 1543 aa10.55□□□□□ -0.72
NEK8-208ENST00000593261 NUP160Q12769 1436 aa10.54□□□□□ -0.72
NEK8-208ENST00000593261 DIP2BQ9P265 1576 aa10.54□□□□□ -0.72
NEK8-208ENST00000593261 KDM4FA0A1W2PPD8 638 aa10.52□□□□□ -0.73
NEK8-208ENST00000593261 ABCC10Q5T3U5 1492 aa10.5□□□□□ -0.73
NEK8-208ENST00000593261 ADCY10Q96PN6 1610 aa10.5□□□□□ -0.73
NEK8-208ENST00000593261 FAM69CQ0P6D2 419 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms