RNA–Protein interactions for RNA: ENST00000593257.1

TRMT1-223, Transcript of tRNA methyltransferase 1, humanhuman

TSL 4

Gene TRMT1, Length 408 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-223ENST00000593257 NISCHQ9Y2I1 1504 aa37.84■■■■□ 3.65
TRMT1-223ENST00000593257 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
TRMT1-223ENST00000593257 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
TRMT1-223ENST00000593257 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
TRMT1-223ENST00000593257 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
TRMT1-223ENST00000593257 ABCC9O60706 1549 aa31.05■■■□□ 2.56
TRMT1-223ENST00000593257 MYO15BQ96JP2 1530 aa31■■■□□ 2.55
TRMT1-223ENST00000593257 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
TRMT1-223ENST00000593257 NACADO15069 1562 aa30.75■■■□□ 2.51
TRMT1-223ENST00000593257 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
TRMT1-223ENST00000593257 SCRIBQ14160 1630 aa30.27■■■□□ 2.44
TRMT1-223ENST00000593257 UNC13AQ9UPW8 1703 aa29.71■■■□□ 2.35
TRMT1-223ENST00000593257 SUPT5HO00267 1087 aaKnown RBP29.69■■■□□ 2.34
TRMT1-223ENST00000593257 BICRAQ9NZM4 1560 aa29.45■■■□□ 2.31
TRMT1-223ENST00000593257 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
TRMT1-223ENST00000593257 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
TRMT1-223ENST00000593257 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
TRMT1-223ENST00000593257 BAZ1AQ9NRL2 1556 aaPredicted RBP29.25■■■□□ 2.27
TRMT1-223ENST00000593257 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
TRMT1-223ENST00000593257 SMARCA4P51532 1647 aa29.06■■■□□ 2.24
TRMT1-223ENST00000593257 WIZO95785 1651 aa28.93■■■□□ 2.22
TRMT1-223ENST00000593257 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
TRMT1-223ENST00000593257 TOP2AP11388 1531 aaKnown RBP28.73■■■□□ 2.19
TRMT1-223ENST00000593257 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
TRMT1-223ENST00000593257 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
TRMT1-223ENST00000593257 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
TRMT1-223ENST00000593257 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
TRMT1-223ENST00000593257 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
TRMT1-223ENST00000593257 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.13
TRMT1-223ENST00000593257 NCAPD3P42695 1498 aa28.36■■■□□ 2.13
TRMT1-223ENST00000593257 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
TRMT1-223ENST00000593257 CC2D2AQ9P2K1 1620 aa28.13■■■□□ 2.09
TRMT1-223ENST00000593257 TRIM41Q8WV44 630 aa27.98■■■□□ 2.07
TRMT1-223ENST00000593257 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
TRMT1-223ENST00000593257 CFTRP13569 1480 aa27.73■■■□□ 2.03
TRMT1-223ENST00000593257 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
TRMT1-223ENST00000593257 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
TRMT1-223ENST00000593257 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
TRMT1-223ENST00000593257 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
TRMT1-223ENST00000593257 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
TRMT1-223ENST00000593257 BIVM-ERCC5R4GMW8 1640 aa27.4■■□□□ 1.98
TRMT1-223ENST00000593257 EEA1Q15075 1411 aa27.4■■□□□ 1.98
TRMT1-223ENST00000593257 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
TRMT1-223ENST00000593257 FAM9AQ8IZU1 332 aaPredicted RBP27.37■■□□□ 1.97
TRMT1-223ENST00000593257 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
TRMT1-223ENST00000593257 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
TRMT1-223ENST00000593257 CUX1P39880 1505 aa27.31■■□□□ 1.96
TRMT1-223ENST00000593257 SOGA1O94964 1423 aa27.25■■□□□ 1.95
TRMT1-223ENST00000593257 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
TRMT1-223ENST00000593257 NESP48681 1621 aa27.25■■□□□ 1.95
TRMT1-223ENST00000593257 PDS5BQ9NTI5 1447 aa27.2■■□□□ 1.94
TRMT1-223ENST00000593257 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
TRMT1-223ENST00000593257 CSRNP3Q8WYN3 585 aa27.15■■□□□ 1.94
TRMT1-223ENST00000593257 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
TRMT1-223ENST00000593257 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
TRMT1-223ENST00000593257 TOPBP1Q92547 1522 aa27.01■■□□□ 1.91
TRMT1-223ENST00000593257 FGD5Q6ZNL6 1462 aa27■■□□□ 1.91
TRMT1-223ENST00000593257 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
TRMT1-223ENST00000593257 KIF21BO75037 1637 aa26.96■■□□□ 1.91
TRMT1-223ENST00000593257 GOLGA3Q08378 1498 aa26.95■■□□□ 1.91
TRMT1-223ENST00000593257 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.9
TRMT1-223ENST00000593257 URB2Q14146 1524 aaKnown RBP26.93■■□□□ 1.9
TRMT1-223ENST00000593257 EHMT2Q96KQ7 1210 aa26.91■■□□□ 1.9
TRMT1-223ENST00000593257 TNIKQ9UKE5 1360 aa26.89■■□□□ 1.9
TRMT1-223ENST00000593257 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
TRMT1-223ENST00000593257 CUX2O14529 1486 aa26.86■■□□□ 1.89
TRMT1-223ENST00000593257 MRC2Q9UBG0 1479 aa26.82■■□□□ 1.88
TRMT1-223ENST00000593257 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
TRMT1-223ENST00000593257 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
TRMT1-223ENST00000593257 PRXQ9BXM0 1461 aa26.79■■□□□ 1.88
TRMT1-223ENST00000593257 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
TRMT1-223ENST00000593257 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
TRMT1-223ENST00000593257 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
TRMT1-223ENST00000593257 IGF1RP08069 1367 aa26.7■■□□□ 1.86
TRMT1-223ENST00000593257 CEP162Q5TB80 1403 aa26.69■■□□□ 1.86
TRMT1-223ENST00000593257 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
TRMT1-223ENST00000593257 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
TRMT1-223ENST00000593257 WDR62O43379 1518 aa26.66■■□□□ 1.86
TRMT1-223ENST00000593257 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.85
TRMT1-223ENST00000593257 TARBP1Q13395 1621 aaKnown RBP26.58■■□□□ 1.85
TRMT1-223ENST00000593257 ABCA5Q8WWZ7 1642 aa26.56■■□□□ 1.84
TRMT1-223ENST00000593257 CUL7Q14999 1698 aa26.54■■□□□ 1.84
TRMT1-223ENST00000593257 IFT140Q96RY7 1462 aa26.53■■□□□ 1.84
TRMT1-223ENST00000593257 GAPVD1Q14C86 1478 aa26.52■■□□□ 1.84
TRMT1-223ENST00000593257 THOC2Q8NI27 1593 aaKnown RBP26.52■■□□□ 1.84
TRMT1-223ENST00000593257 CLIP1P30622 1438 aa26.49■■□□□ 1.83
TRMT1-223ENST00000593257 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
TRMT1-223ENST00000593257 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
TRMT1-223ENST00000593257 PBRM1Q86U86 1689 aa26.33■■□□□ 1.81
TRMT1-223ENST00000593257 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.85e-6■■■□□ 16.9
TRMT1-223ENST00000593257 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
TRMT1-223ENST00000593257 TRIM26Q12899 539 aaPredicted RBP26.27■■□□□ 1.8
TRMT1-223ENST00000593257 FHAD1B1AJZ9 1412 aa26.27■■□□□ 1.8
TRMT1-223ENST00000593257 ZNF608Q9ULD9 1512 aaPredicted RBP26.25■■□□□ 1.79
TRMT1-223ENST00000593257 ADAMTS12P58397 1594 aa26.22■■□□□ 1.79
TRMT1-223ENST00000593257 RANGAP1P46060 587 aaPredicted RBP26.21■■□□□ 1.79
TRMT1-223ENST00000593257 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.79
TRMT1-223ENST00000593257 CTTNBP2Q8WZ74 1663 aa26.2■■□□□ 1.78
TRMT1-223ENST00000593257 ARAP1Q96P48 1450 aa26.2■■□□□ 1.78
TRMT1-223ENST00000593257 ARHGAP35Q9NRY4 1499 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms