RNA–Protein interactions for RNA: ENST00000593179.1

GFAP-224, Transcript of glial fibrillary acidic protein, humanhuman

TSL 4

Gene GFAP, Length 370 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-224ENST00000593179 NISCHQ9Y2I1 1504 aa44.86■■■■■ 4.77
GFAP-224ENST00000593179 CCDC180Q9P1Z9 1646 aa40.08■■■■■ 4.01
GFAP-224ENST00000593179 ABCC9O60706 1549 aa39.38■■■■□ 3.89
GFAP-224ENST00000593179 RB1CC1Q8TDY2 1594 aa37.79■■■■□ 3.64
GFAP-224ENST00000593179 NACADO15069 1562 aa37.68■■■■□ 3.62
GFAP-224ENST00000593179 DCAF8L2P0C7V8 631 aa37.43■■■■□ 3.58
GFAP-224ENST00000593179 MYO15BQ96JP2 1530 aa37.37■■■■□ 3.57
GFAP-224ENST00000593179 ZCCHC6Q5VYS8 1495 aaKnown RBP37.33■■■■□ 3.57
GFAP-224ENST00000593179 DCAF1Q9Y4B6 1507 aa37.12■■■■□ 3.53
GFAP-224ENST00000593179 UNC13AQ9UPW8 1703 aa37.1■■■■□ 3.53
GFAP-224ENST00000593179 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
GFAP-224ENST00000593179 PABPN1Q86U42 306 aaKnown RBP eCLIP36.71■■■■□ 3.47
GFAP-224ENST00000593179 SCRIBQ14160 1630 aa36.5■■■■□ 3.43
GFAP-224ENST00000593179 DNAJC5BQ9UF47 199 aa36.42■■■■□ 3.42
GFAP-224ENST00000593179 SHROOM4Q9ULL8 1493 aa36.24■■■■□ 3.39
GFAP-224ENST00000593179 EIF4G1Q04637 1599 aaKnown RBP35.73■■■■□ 3.31
GFAP-224ENST00000593179 CC2D2AQ9P2K1 1620 aa35.68■■■■□ 3.3
GFAP-224ENST00000593179 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
GFAP-224ENST00000593179 SMARCA4P51532 1647 aa34.91■■■■□ 3.18
GFAP-224ENST00000593179 BAZ1AQ9NRL2 1556 aaPredicted RBP34.78■■■■□ 3.16
GFAP-224ENST00000593179 NCAPD3P42695 1498 aa34.75■■■■□ 3.15
GFAP-224ENST00000593179 ATAD2BQ9ULI0 1458 aa34.74■■■■□ 3.15
GFAP-224ENST00000593179 SMARCA2P51531 1590 aa34.68■■■■□ 3.14
GFAP-224ENST00000593179 HMGXB3Q12766 1538 aa34.6■■■■□ 3.13
GFAP-224ENST00000593179 MROH2BQ7Z745 1585 aa34.58■■■■□ 3.13
GFAP-224ENST00000593179 PEG3Q9GZU2 1588 aa34.57■■■■□ 3.13
GFAP-224ENST00000593179 BAZ1BQ9UIG0 1483 aaKnown RBP34.41■■■■□ 3.1
GFAP-224ENST00000593179 WIZO95785 1651 aa34.24■■■■□ 3.07
GFAP-224ENST00000593179 RSF1Q96T23 1441 aaPredicted RBP34.04■■■■□ 3.04
GFAP-224ENST00000593179 NESP48681 1621 aa34.04■■■■□ 3.04
GFAP-224ENST00000593179 ERCC6Q03468 1493 aa33.93■■■■□ 3.02
GFAP-224ENST00000593179 LAMC3Q9Y6N6 1575 aa33.9■■■■□ 3.02
GFAP-224ENST00000593179 TOP2AP11388 1531 aaKnown RBP33.82■■■■□ 3
GFAP-224ENST00000593179 CUX2O14529 1486 aa33.72■■■□□ 2.99
GFAP-224ENST00000593179 KIF21AQ7Z4S6 1674 aa33.71■■■□□ 2.99
GFAP-224ENST00000593179 CADPSQ9ULU8 1353 aa33.7■■■□□ 2.98
GFAP-224ENST00000593179 THOC2Q8NI27 1593 aaKnown RBP33.64■■■□□ 2.98
GFAP-224ENST00000593179 PDS5BQ9NTI5 1447 aa33.62■■■□□ 2.97
GFAP-224ENST00000593179 CFTRP13569 1480 aa33.47■■■□□ 2.95
GFAP-224ENST00000593179 CCDC88BA6NC98 1476 aa33.39■■■□□ 2.94
GFAP-224ENST00000593179 PRDM2Q13029 1718 aa33.36■■■□□ 2.93
GFAP-224ENST00000593179 MRC2Q9UBG0 1479 aa33.34■■■□□ 2.93
GFAP-224ENST00000593179 FANCD2Q9BXW9 1451 aa33.33■■■□□ 2.93
GFAP-224ENST00000593179 CEP164Q9UPV0 1460 aa33.31■■■□□ 2.92
GFAP-224ENST00000593179 WDR62O43379 1518 aa33.28■■■□□ 2.92
GFAP-224ENST00000593179 URB2Q14146 1524 aaKnown RBP33.06■■■□□ 2.88
GFAP-224ENST00000593179 DNAJC5Q9H3Z4 198 aa32.97■■■□□ 2.87
GFAP-224ENST00000593179 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
GFAP-224ENST00000593179 TOPBP1Q92547 1522 aa32.79■■■□□ 2.84
GFAP-224ENST00000593179 DNMBPQ6XZF7 1577 aa32.75■■■□□ 2.83
GFAP-224ENST00000593179 ABCC8Q09428 1581 aa32.73■■■□□ 2.83
GFAP-224ENST00000593179 IFT140Q96RY7 1462 aa32.62■■■□□ 2.81
GFAP-224ENST00000593179 ZNF608Q9ULD9 1512 aaPredicted RBP32.54■■■□□ 2.8
GFAP-224ENST00000593179 TARBP1Q13395 1621 aaKnown RBP32.51■■■□□ 2.79
GFAP-224ENST00000593179 POLA1P09884 1462 aaPredicted RBP32.49■■■□□ 2.79
GFAP-224ENST00000593179 CUX1P39880 1505 aa32.46■■■□□ 2.79
GFAP-224ENST00000593179 EIF4G3O43432 1585 aaKnown RBP32.43■■■□□ 2.78
GFAP-224ENST00000593179 FGD5Q6ZNL6 1462 aa32.36■■■□□ 2.77
GFAP-224ENST00000593179 RAD54L2Q9Y4B4 1467 aa32.35■■■□□ 2.77
GFAP-224ENST00000593179 SOGA1O94964 1423 aa32.3■■■□□ 2.76
GFAP-224ENST00000593179 AQRO60306 1485 aaKnown RBP eCLIP32.29■■■□□ 2.76
GFAP-224ENST00000593179 WDR97A6NE52 1622 aa32.23■■■□□ 2.75
GFAP-224ENST00000593179 OSCARQ8IYS5 282 aa32.19■■■□□ 2.74
GFAP-224ENST00000593179 BIVM-ERCC5R4GMW8 1640 aa32.15■■■□□ 2.74
GFAP-224ENST00000593179 TDRD9Q8NDG6 1382 aaKnown RBP32.15■■■□□ 2.74
GFAP-224ENST00000593179 CHD1O14646 1710 aa32.14■■■□□ 2.74
GFAP-224ENST00000593179 TOP2BQ02880 1626 aa32.11■■■□□ 2.73
GFAP-224ENST00000593179 SYNJ1O43426 1573 aa32.11■■■□□ 2.73
GFAP-224ENST00000593179 WRNQ14191 1432 aaPredicted RBP eCLIP32.09■■■□□ 2.73
GFAP-224ENST00000593179 ABCA10Q8WWZ4 1543 aa32.05■■■□□ 2.72
GFAP-224ENST00000593179 PBRM1Q86U86 1689 aa32.02■■■□□ 2.72
GFAP-224ENST00000593179 ABCA5Q8WWZ7 1642 aa32■■■□□ 2.71
GFAP-224ENST00000593179 SNAPC4Q5SXM2 1469 aa32■■■□□ 2.71
GFAP-224ENST00000593179 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
GFAP-224ENST00000593179 GAPVD1Q14C86 1478 aa31.95■■■□□ 2.7
GFAP-224ENST00000593179 MAGI1Q96QZ7 1491 aaPredicted RBP31.94■■■□□ 2.7
GFAP-224ENST00000593179 FBLN2P98095 1184 aa31.85■■■□□ 2.69
GFAP-224ENST00000593179 RIMBP3CA6NJZ7 1639 aa31.85■■■□□ 2.69
GFAP-224ENST00000593179 RIMBP3BA6NNM3 1639 aa31.85■■■□□ 2.69
GFAP-224ENST00000593179 RIMBP3Q9UFD9 1639 aa31.85■■■□□ 2.69
GFAP-224ENST00000593179 SYNJ2O15056 1496 aa31.81■■■□□ 2.68
GFAP-224ENST00000593179 ARHGEF11O15085 1522 aa31.77■■■□□ 2.68
GFAP-224ENST00000593179 CHMP7Q8WUX9 453 aaPredicted RBP31.73■■■□□ 2.67
GFAP-224ENST00000593179 CLASP1Q7Z460 1538 aa31.73■■■□□ 2.67
GFAP-224ENST00000593179 TRIM41Q8WV44 630 aa31.72■■■□□ 2.67
GFAP-224ENST00000593179 ADAMTS12P58397 1594 aa31.7■■■□□ 2.67
GFAP-224ENST00000593179 ERICH3Q5RHP9 1530 aa31.65■■■□□ 2.66
GFAP-224ENST00000593179 GRIN2AQ12879 1464 aa31.59■■■□□ 2.65
GFAP-224ENST00000593179 FHAD1B1AJZ9 1412 aa31.56■■■□□ 2.64
GFAP-224ENST00000593179 ARAP1Q96P48 1450 aa31.51■■■□□ 2.63
GFAP-224ENST00000593179 CEP170Q5SW79 1584 aa31.49■■■□□ 2.63
GFAP-224ENST00000593179 NUP160Q12769 1436 aa31.47■■■□□ 2.63
GFAP-224ENST00000593179 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
GFAP-224ENST00000593179 CYB5RLQ6IPT4 315 aa31.39■■■□□ 2.62
GFAP-224ENST00000593179 CUL7Q14999 1698 aa31.35■■■□□ 2.61
GFAP-224ENST00000593179 IGF1RP08069 1367 aa31.34■■■□□ 2.61
GFAP-224ENST00000593179 SHROOM2Q13796 1616 aa31.33■■■□□ 2.61
GFAP-224ENST00000593179 ERCC6L2Q5T890 1561 aa31.28■■■□□ 2.6
GFAP-224ENST00000593179 RUSC2Q8N2Y8 1516 aa31.24■■■□□ 2.59
GFAP-224ENST00000593179 CARMIL1Q5VZK9 1371 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms