RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
CACNA1A-212ENST00000593160 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
CACNA1A-212ENST00000593160 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
CACNA1A-212ENST00000593160 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
CACNA1A-212ENST00000593160 ABCC9O60706 1549 aa24.07■■□□□ 1.44
CACNA1A-212ENST00000593160 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
CACNA1A-212ENST00000593160 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
CACNA1A-212ENST00000593160 NACADO15069 1562 aa23.74■■□□□ 1.39
CACNA1A-212ENST00000593160 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
CACNA1A-212ENST00000593160 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
CACNA1A-212ENST00000593160 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
CACNA1A-212ENST00000593160 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
CACNA1A-212ENST00000593160 BICRAQ9NZM4 1560 aa22.88■■□□□ 1.25
CACNA1A-212ENST00000593160 SUPT5HO00267 1087 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-212ENST00000593160 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
CACNA1A-212ENST00000593160 PABPN1Q86U42 306 aaKnown RBP eCLIP22.62■■□□□ 1.21
CACNA1A-212ENST00000593160 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
CACNA1A-212ENST00000593160 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
CACNA1A-212ENST00000593160 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
CACNA1A-212ENST00000593160 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
CACNA1A-212ENST00000593160 WIZO95785 1651 aa22.39■■□□□ 1.17
CACNA1A-212ENST00000593160 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
CACNA1A-212ENST00000593160 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-212ENST00000593160 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-212ENST00000593160 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.12
CACNA1A-212ENST00000593160 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
CACNA1A-212ENST00000593160 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
CACNA1A-212ENST00000593160 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
CACNA1A-212ENST00000593160 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
CACNA1A-212ENST00000593160 NCAPD3P42695 1498 aa21.88■■□□□ 1.09
CACNA1A-212ENST00000593160 CC2D2AQ9P2K1 1620 aa21.84■■□□□ 1.09
CACNA1A-212ENST00000593160 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
CACNA1A-212ENST00000593160 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
CACNA1A-212ENST00000593160 CFTRP13569 1480 aa21.4■■□□□ 1.02
CACNA1A-212ENST00000593160 PRDM2Q13029 1718 aa21.4■■□□□ 1.02
CACNA1A-212ENST00000593160 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
CACNA1A-212ENST00000593160 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
CACNA1A-212ENST00000593160 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
CACNA1A-212ENST00000593160 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
CACNA1A-212ENST00000593160 DNAJC5BQ9UF47 199 aa21.21■□□□□ 0.99
CACNA1A-212ENST00000593160 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
CACNA1A-212ENST00000593160 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
CACNA1A-212ENST00000593160 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
CACNA1A-212ENST00000593160 NESP48681 1621 aa21.15■□□□□ 0.98
CACNA1A-212ENST00000593160 CUX1P39880 1505 aa21.1■□□□□ 0.97
CACNA1A-212ENST00000593160 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.97
CACNA1A-212ENST00000593160 SOGA1O94964 1423 aa20.99■□□□□ 0.95
CACNA1A-212ENST00000593160 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
CACNA1A-212ENST00000593160 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
CACNA1A-212ENST00000593160 CEP164Q9UPV0 1460 aa20.96■□□□□ 0.95
CACNA1A-212ENST00000593160 EEA1Q15075 1411 aa20.95■□□□□ 0.94
CACNA1A-212ENST00000593160 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
CACNA1A-212ENST00000593160 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
CACNA1A-212ENST00000593160 RUSC2Q8N2Y8 1516 aa20.93■□□□□ 0.94
CACNA1A-212ENST00000593160 LOC105371045A0A1W2PR82 267 aa20.9■□□□□ 0.94
CACNA1A-212ENST00000593160 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
CACNA1A-212ENST00000593160 FGD5Q6ZNL6 1462 aa20.86■□□□□ 0.93
CACNA1A-212ENST00000593160 URB2Q14146 1524 aaKnown RBP20.85■□□□□ 0.93
CACNA1A-212ENST00000593160 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.91
CACNA1A-212ENST00000593160 CSRNP3Q8WYN3 585 aa20.76■□□□□ 0.91
CACNA1A-212ENST00000593160 KIF21BO75037 1637 aa20.75■□□□□ 0.91
CACNA1A-212ENST00000593160 MRC2Q9UBG0 1479 aa20.73■□□□□ 0.91
CACNA1A-212ENST00000593160 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
CACNA1A-212ENST00000593160 KIF27Q86VH2 1401 aa20.71■□□□□ 0.91
CACNA1A-212ENST00000593160 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
CACNA1A-212ENST00000593160 CUX2O14529 1486 aa20.68■□□□□ 0.9
CACNA1A-212ENST00000593160 GOLGA3Q08378 1498 aa20.67■□□□□ 0.9
CACNA1A-212ENST00000593160 RAD54L2Q9Y4B4 1467 aa20.67■□□□□ 0.9
CACNA1A-212ENST00000593160 WDR62O43379 1518 aa20.66■□□□□ 0.9
CACNA1A-212ENST00000593160 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.9
CACNA1A-212ENST00000593160 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.89
CACNA1A-212ENST00000593160 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
CACNA1A-212ENST00000593160 PRXQ9BXM0 1461 aa20.61■□□□□ 0.89
CACNA1A-212ENST00000593160 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-212ENST00000593160 ERICH3Q5RHP9 1530 aa20.6■□□□□ 0.89
CACNA1A-212ENST00000593160 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.89
CACNA1A-212ENST00000593160 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
CACNA1A-212ENST00000593160 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
CACNA1A-212ENST00000593160 IGF1RP08069 1367 aa20.53■□□□□ 0.88
CACNA1A-212ENST00000593160 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
CACNA1A-212ENST00000593160 CUL7Q14999 1698 aa20.47■□□□□ 0.87
CACNA1A-212ENST00000593160 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
CACNA1A-212ENST00000593160 UBTFP17480 764 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-212ENST00000593160 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
CACNA1A-212ENST00000593160 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-212ENST00000593160 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
CACNA1A-212ENST00000593160 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
CACNA1A-212ENST00000593160 ZNF608Q9ULD9 1512 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-212ENST00000593160 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-212ENST00000593160 AQRO60306 1485 aaKnown RBP eCLIP20.32■□□□□ 0.84
CACNA1A-212ENST00000593160 CLIP1P30622 1438 aa20.31■□□□□ 0.84
CACNA1A-212ENST00000593160 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
CACNA1A-212ENST00000593160 GRIN2BQ13224 1484 aa20.29■□□□□ 0.84
CACNA1A-212ENST00000593160 CTTNBP2Q8WZ74 1663 aa20.27■□□□□ 0.84
CACNA1A-212ENST00000593160 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
CACNA1A-212ENST00000593160 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
CACNA1A-212ENST00000593160 SNAPC4Q5SXM2 1469 aa20.17■□□□□ 0.82
CACNA1A-212ENST00000593160 ARHGAP35Q9NRY4 1499 aa20.16■□□□□ 0.82
CACNA1A-212ENST00000593160 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
CACNA1A-212ENST00000593160 MAGI1Q96QZ7 1491 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms