RNA–Protein interactions for RNA: ENST00000593136.2

RAVER1-205, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 5

Gene RAVER1, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-205ENST00000593136 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
RAVER1-205ENST00000593136 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
RAVER1-205ENST00000593136 ABCC9O60706 1549 aa29.87■■■□□ 2.37
RAVER1-205ENST00000593136 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
RAVER1-205ENST00000593136 NACADO15069 1562 aa28.45■■■□□ 2.14
RAVER1-205ENST00000593136 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
RAVER1-205ENST00000593136 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
RAVER1-205ENST00000593136 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.06
RAVER1-205ENST00000593136 DNAJC5BQ9UF47 199 aa27.88■■■□□ 2.05
RAVER1-205ENST00000593136 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
RAVER1-205ENST00000593136 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
RAVER1-205ENST00000593136 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
RAVER1-205ENST00000593136 BICRAQ9NZM4 1560 aa27.73■■■□□ 2.03
RAVER1-205ENST00000593136 SHROOM4Q9ULL8 1493 aa27.45■■□□□ 1.99
RAVER1-205ENST00000593136 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
RAVER1-205ENST00000593136 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
RAVER1-205ENST00000593136 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
RAVER1-205ENST00000593136 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
RAVER1-205ENST00000593136 NCAPD3P42695 1498 aa26.28■■□□□ 1.8
RAVER1-205ENST00000593136 ATAD2BQ9ULI0 1458 aa26.2■■□□□ 1.78
RAVER1-205ENST00000593136 SMARCA4P51532 1647 aa26.2■■□□□ 1.78
RAVER1-205ENST00000593136 SMARCA2P51531 1590 aa26.13■■□□□ 1.77
RAVER1-205ENST00000593136 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
RAVER1-205ENST00000593136 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
RAVER1-205ENST00000593136 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
RAVER1-205ENST00000593136 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
RAVER1-205ENST00000593136 MROH2BQ7Z745 1585 aa25.91■■□□□ 1.74
RAVER1-205ENST00000593136 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
RAVER1-205ENST00000593136 CUX2O14529 1486 aa25.73■■□□□ 1.71
RAVER1-205ENST00000593136 NESP48681 1621 aa25.73■■□□□ 1.71
RAVER1-205ENST00000593136 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
RAVER1-205ENST00000593136 WIZO95785 1651 aa25.58■■□□□ 1.69
RAVER1-205ENST00000593136 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
RAVER1-205ENST00000593136 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
RAVER1-205ENST00000593136 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
RAVER1-205ENST00000593136 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
RAVER1-205ENST00000593136 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
RAVER1-205ENST00000593136 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
RAVER1-205ENST00000593136 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
RAVER1-205ENST00000593136 CFTRP13569 1480 aa25.23■■□□□ 1.63
RAVER1-205ENST00000593136 MRC2Q9UBG0 1479 aa25.22■■□□□ 1.63
RAVER1-205ENST00000593136 WDR62O43379 1518 aa25.17■■□□□ 1.62
RAVER1-205ENST00000593136 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
RAVER1-205ENST00000593136 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
RAVER1-205ENST00000593136 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
RAVER1-205ENST00000593136 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
RAVER1-205ENST00000593136 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
RAVER1-205ENST00000593136 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
RAVER1-205ENST00000593136 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
RAVER1-205ENST00000593136 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
RAVER1-205ENST00000593136 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
RAVER1-205ENST00000593136 ZNF608Q9ULD9 1512 aaPredicted RBP24.58■■□□□ 1.53
RAVER1-205ENST00000593136 OSCARQ8IYS5 282 aa24.58■■□□□ 1.53
RAVER1-205ENST00000593136 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
RAVER1-205ENST00000593136 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
RAVER1-205ENST00000593136 EIF4G3O43432 1585 aaKnown RBP24.45■■□□□ 1.5
RAVER1-205ENST00000593136 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
RAVER1-205ENST00000593136 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.491e-7■■■■■ 33.8
RAVER1-205ENST00000593136 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
RAVER1-205ENST00000593136 SOGA1O94964 1423 aa24.35■■□□□ 1.49
RAVER1-205ENST00000593136 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
RAVER1-205ENST00000593136 CUX1P39880 1505 aa24.35■■□□□ 1.49
RAVER1-205ENST00000593136 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
RAVER1-205ENST00000593136 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
RAVER1-205ENST00000593136 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
RAVER1-205ENST00000593136 CHD1O14646 1710 aa24.19■■□□□ 1.46
RAVER1-205ENST00000593136 RIMBP3CA6NJZ7 1639 aa24.19■■□□□ 1.46
RAVER1-205ENST00000593136 RIMBP3BA6NNM3 1639 aa24.19■■□□□ 1.46
RAVER1-205ENST00000593136 RIMBP3Q9UFD9 1639 aa24.19■■□□□ 1.46
RAVER1-205ENST00000593136 ARHGEF11O15085 1522 aa24.16■■□□□ 1.46
RAVER1-205ENST00000593136 FBLN2P98095 1184 aa24.16■■□□□ 1.46
RAVER1-205ENST00000593136 SNAPC4Q5SXM2 1469 aa24.14■■□□□ 1.46
RAVER1-205ENST00000593136 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
RAVER1-205ENST00000593136 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
RAVER1-205ENST00000593136 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
RAVER1-205ENST00000593136 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
RAVER1-205ENST00000593136 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
RAVER1-205ENST00000593136 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
RAVER1-205ENST00000593136 SYNJ2O15056 1496 aa24.04■■□□□ 1.44
RAVER1-205ENST00000593136 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
RAVER1-205ENST00000593136 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
RAVER1-205ENST00000593136 BIVM-ERCC5R4GMW8 1640 aa24■■□□□ 1.43
RAVER1-205ENST00000593136 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
RAVER1-205ENST00000593136 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
RAVER1-205ENST00000593136 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
RAVER1-205ENST00000593136 CYB5RLQ6IPT4 315 aa23.96■■□□□ 1.43
RAVER1-205ENST00000593136 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
RAVER1-205ENST00000593136 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
RAVER1-205ENST00000593136 ADAMTS12P58397 1594 aa23.81■■□□□ 1.4
RAVER1-205ENST00000593136 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
RAVER1-205ENST00000593136 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
RAVER1-205ENST00000593136 NUP160Q12769 1436 aa23.76■■□□□ 1.39
RAVER1-205ENST00000593136 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
RAVER1-205ENST00000593136 SHROOM2Q13796 1616 aa23.6■■□□□ 1.37
RAVER1-205ENST00000593136 TRHP20396 242 aaPredicted RBP23.6■■□□□ 1.37
RAVER1-205ENST00000593136 ERCC6L2Q5T890 1561 aa23.58■■□□□ 1.37
RAVER1-205ENST00000593136 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
RAVER1-205ENST00000593136 IGF1RP08069 1367 aa23.55■■□□□ 1.36
RAVER1-205ENST00000593136 JPH4Q96JJ6 628 aa23.5■■□□□ 1.35
RAVER1-205ENST00000593136 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms