RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NISCHQ9Y2I1 1504 aa51.17■■■■■ 5.78
TRIM47-207ENST00000593089 CCDC180Q9P1Z9 1646 aa45.88■■■■■ 4.94
TRIM47-207ENST00000593089 ABCC9O60706 1549 aa45.82■■■■■ 4.93
TRIM47-207ENST00000593089 RB1CC1Q8TDY2 1594 aa43.63■■■■■ 4.58
TRIM47-207ENST00000593089 NACADO15069 1562 aa43.34■■■■■ 4.53
TRIM47-207ENST00000593089 DCAF8L2P0C7V8 631 aa43.22■■■■■ 4.51
TRIM47-207ENST00000593089 DNAJC5BQ9UF47 199 aa42.86■■■■■ 4.45
TRIM47-207ENST00000593089 MYO15BQ96JP2 1530 aa42.73■■■■■ 4.43
TRIM47-207ENST00000593089 UNC13AQ9UPW8 1703 aa42.7■■■■■ 4.43
TRIM47-207ENST00000593089 PABPN1Q86U42 306 aaKnown RBP eCLIP42.68■■■■■ 4.42
TRIM47-207ENST00000593089 ZCCHC6Q5VYS8 1495 aaKnown RBP42.43■■■■■ 4.38
TRIM47-207ENST00000593089 BICRAQ9NZM4 1560 aa42.35■■■■■ 4.37
TRIM47-207ENST00000593089 DCAF1Q9Y4B6 1507 aa42.24■■■■■ 4.35
TRIM47-207ENST00000593089 SCRIBQ14160 1630 aa41.87■■■■■ 4.29
TRIM47-207ENST00000593089 SHROOM4Q9ULL8 1493 aa41.74■■■■■ 4.27
TRIM47-207ENST00000593089 CC2D2AQ9P2K1 1620 aa41.4■■■■■ 4.22
TRIM47-207ENST00000593089 EIF4G1Q04637 1599 aaKnown RBP41.32■■■■■ 4.2
TRIM47-207ENST00000593089 CECR2Q9BXF3 1484 aa41.25■■■■■ 4.19
TRIM47-207ENST00000593089 NCAPD3P42695 1498 aa39.99■■■■□ 3.99
TRIM47-207ENST00000593089 SMARCA4P51532 1647 aa39.92■■■■□ 3.98
TRIM47-207ENST00000593089 ATAD2BQ9ULI0 1458 aa39.91■■■■□ 3.98
TRIM47-207ENST00000593089 SMARCA2P51531 1590 aa39.8■■■■□ 3.96
TRIM47-207ENST00000593089 BAZ1AQ9NRL2 1556 aaPredicted RBP39.72■■■■□ 3.95
TRIM47-207ENST00000593089 HMGXB3Q12766 1538 aa39.72■■■■□ 3.95
TRIM47-207ENST00000593089 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
TRIM47-207ENST00000593089 BAZ1BQ9UIG0 1483 aaKnown RBP39.55■■■■□ 3.92
TRIM47-207ENST00000593089 PEG3Q9GZU2 1588 aa39.49■■■■□ 3.91
TRIM47-207ENST00000593089 MROH2BQ7Z745 1585 aa39.45■■■■□ 3.91
TRIM47-207ENST00000593089 CUX2O14529 1486 aa39.41■■■■□ 3.9
TRIM47-207ENST00000593089 NESP48681 1621 aa39.4■■■■□ 3.9
TRIM47-207ENST00000593089 DNAJC5Q9H3Z4 198 aa39.26■■■■□ 3.88
TRIM47-207ENST00000593089 LAMC3Q9Y6N6 1575 aa39.11■■■■□ 3.85
TRIM47-207ENST00000593089 WIZO95785 1651 aa39.02■■■■□ 3.84
TRIM47-207ENST00000593089 THOC2Q8NI27 1593 aaKnown RBP38.96■■■■□ 3.83
TRIM47-207ENST00000593089 KIF21AQ7Z4S6 1674 aa38.91■■■■□ 3.82
TRIM47-207ENST00000593089 PDS5BQ9NTI5 1447 aa38.87■■■■□ 3.81
TRIM47-207ENST00000593089 CADPSQ9ULU8 1353 aa38.8■■■■□ 3.8
TRIM47-207ENST00000593089 RSF1Q96T23 1441 aaPredicted RBP38.64■■■■□ 3.78
TRIM47-207ENST00000593089 MRC2Q9UBG0 1479 aa38.54■■■■□ 3.76
TRIM47-207ENST00000593089 TOP2AP11388 1531 aaKnown RBP38.49■■■■□ 3.75
TRIM47-207ENST00000593089 WDR62O43379 1518 aa38.43■■■■□ 3.74
TRIM47-207ENST00000593089 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
TRIM47-207ENST00000593089 FANCD2Q9BXW9 1451 aa38.38■■■■□ 3.73
TRIM47-207ENST00000593089 CFTRP13569 1480 aa38.37■■■■□ 3.73
TRIM47-207ENST00000593089 PRDM2Q13029 1718 aa38.07■■■■□ 3.68
TRIM47-207ENST00000593089 CCDC88BA6NC98 1476 aa38.06■■■■□ 3.68
TRIM47-207ENST00000593089 URB2Q14146 1524 aaKnown RBP38.06■■■■□ 3.68
TRIM47-207ENST00000593089 TOPBP1Q92547 1522 aa37.66■■■■□ 3.62
TRIM47-207ENST00000593089 TRIM41Q8WV44 630 aa37.66■■■■□ 3.62
TRIM47-207ENST00000593089 OSCARQ8IYS5 282 aa37.63■■■■□ 3.61
TRIM47-207ENST00000593089 IFT140Q96RY7 1462 aa37.63■■■■□ 3.61
TRIM47-207ENST00000593089 ZNF608Q9ULD9 1512 aaPredicted RBP37.58■■■■□ 3.61
TRIM47-207ENST00000593089 ABCC8Q09428 1581 aa37.56■■■■□ 3.6
TRIM47-207ENST00000593089 DNMBPQ6XZF7 1577 aa37.54■■■■□ 3.6
TRIM47-207ENST00000593089 EIF4G3O43432 1585 aaKnown RBP37.4■■■■□ 3.58
TRIM47-207ENST00000593089 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.57
TRIM47-207ENST00000593089 POLA1P09884 1462 aaPredicted RBP37.28■■■■□ 3.56
TRIM47-207ENST00000593089 AQRO60306 1485 aaKnown RBP eCLIP37.26■■■■□ 3.552e-6■■■■■ 43.7
TRIM47-207ENST00000593089 RIMBP3CA6NJZ7 1639 aa37.18■■■■□ 3.54
TRIM47-207ENST00000593089 RIMBP3BA6NNM3 1639 aa37.18■■■■□ 3.54
TRIM47-207ENST00000593089 RIMBP3Q9UFD9 1639 aa37.18■■■■□ 3.54
TRIM47-207ENST00000593089 RAD54L2Q9Y4B4 1467 aa37.17■■■■□ 3.54
TRIM47-207ENST00000593089 CHD1O14646 1710 aa37.13■■■■□ 3.53
TRIM47-207ENST00000593089 SOGA1O94964 1423 aa37.11■■■■□ 3.53
TRIM47-207ENST00000593089 FGD5Q6ZNL6 1462 aa37.08■■■■□ 3.53
TRIM47-207ENST00000593089 SUPT5HO00267 1087 aaKnown RBP37.08■■■■□ 3.53
TRIM47-207ENST00000593089 CUX1P39880 1505 aa37.05■■■■□ 3.52
TRIM47-207ENST00000593089 ARHGEF11O15085 1522 aa37.05■■■■□ 3.52
TRIM47-207ENST00000593089 TDRD9Q8NDG6 1382 aaKnown RBP37.04■■■■□ 3.52
TRIM47-207ENST00000593089 FBLN2P98095 1184 aa37.02■■■■□ 3.52
TRIM47-207ENST00000593089 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
TRIM47-207ENST00000593089 SNAPC4Q5SXM2 1469 aa36.88■■■■□ 3.5
TRIM47-207ENST00000593089 GRIN2BQ13224 1484 aa36.78■■■■□ 3.48
TRIM47-207ENST00000593089 CYB5RLQ6IPT4 315 aa36.77■■■■□ 3.48
TRIM47-207ENST00000593089 MAGI1Q96QZ7 1491 aaPredicted RBP36.76■■■■□ 3.48
TRIM47-207ENST00000593089 CHMP7Q8WUX9 453 aaPredicted RBP36.73■■■■□ 3.47
TRIM47-207ENST00000593089 PBRM1Q86U86 1689 aa36.7■■■■□ 3.47
TRIM47-207ENST00000593089 ARAP1Q96P48 1450 aa36.69■■■■□ 3.46
TRIM47-207ENST00000593089 GAPVD1Q14C86 1478 aa36.67■■■■□ 3.46
TRIM47-207ENST00000593089 CLASP1Q7Z460 1538 aa36.65■■■■□ 3.46
TRIM47-207ENST00000593089 SYNJ2O15056 1496 aa36.65■■■■□ 3.46
TRIM47-207ENST00000593089 SYNJ1O43426 1573 aa36.65■■■■□ 3.46
TRIM47-207ENST00000593089 ABCA10Q8WWZ4 1543 aa36.64■■■■□ 3.46
TRIM47-207ENST00000593089 ABCA5Q8WWZ7 1642 aa36.6■■■■□ 3.45
TRIM47-207ENST00000593089 WRNQ14191 1432 aaPredicted RBP eCLIP36.51■■■■□ 3.44
TRIM47-207ENST00000593089 BIVM-ERCC5R4GMW8 1640 aa36.5■■■■□ 3.43
TRIM47-207ENST00000593089 TOP2BQ02880 1626 aa36.49■■■■□ 3.43
TRIM47-207ENST00000593089 TRHP20396 242 aaPredicted RBP36.36■■■■□ 3.41
TRIM47-207ENST00000593089 ADAMTS12P58397 1594 aa36.32■■■■□ 3.41
TRIM47-207ENST00000593089 GRIN2AQ12879 1464 aa36.31■■■■□ 3.4
TRIM47-207ENST00000593089 CEP170Q5SW79 1584 aa36.2■■■■□ 3.39
TRIM47-207ENST00000593089 FHAD1B1AJZ9 1412 aa36.19■■■■□ 3.38
TRIM47-207ENST00000593089 ERICH3Q5RHP9 1530 aa36.18■■■■□ 3.38
TRIM47-207ENST00000593089 NUP160Q12769 1436 aa36.17■■■■□ 3.38
TRIM47-207ENST00000593089 ERCC6L2Q5T890 1561 aa36.12■■■■□ 3.37
TRIM47-207ENST00000593089 SHROOM2Q13796 1616 aa36.01■■■■□ 3.36
TRIM47-207ENST00000593089 PRG4Q92954 1404 aaPredicted RBP35.84■■■■□ 3.33
TRIM47-207ENST00000593089 RUSC2Q8N2Y8 1516 aa35.81■■■■□ 3.32
TRIM47-207ENST00000593089 JPH4Q96JJ6 628 aa35.8■■■■□ 3.32
TRIM47-207ENST00000593089 KIF27Q86VH2 1401 aa35.76■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms