RNA–Protein interactions for RNA: ENST00000593079.1

RUNDC3A-207, Transcript of RUN domain containing 3A, humanhuman

TSL 3

Gene RUNDC3A, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-207ENST00000593079 NISCHQ9Y2I1 1504 aa9.69□□□□□ -0.86
RUNDC3A-207ENST00000593079 CCDC180Q9P1Z9 1646 aa8.62□□□□□ -1.03
RUNDC3A-207ENST00000593079 PELP1Q8IZL8 1130 aaKnown RBP8.45□□□□□ -1.06
RUNDC3A-207ENST00000593079 MYT1Q01538 1121 aa8.36□□□□□ -1.07
RUNDC3A-207ENST00000593079 ZCCHC6Q5VYS8 1495 aaKnown RBP8.17□□□□□ -1.1
RUNDC3A-207ENST00000593079 TTBK1Q5TCY1 1321 aaPredicted RBP8.11□□□□□ -1.11
RUNDC3A-207ENST00000593079 DCAF1Q9Y4B6 1507 aa8.09□□□□□ -1.11
RUNDC3A-207ENST00000593079 MYO15BQ96JP2 1530 aa8.01□□□□□ -1.13
RUNDC3A-207ENST00000593079 NACADO15069 1562 aa7.96□□□□□ -1.14
RUNDC3A-207ENST00000593079 ABCC9O60706 1549 aa7.92□□□□□ -1.14
RUNDC3A-207ENST00000593079 RB1CC1Q8TDY2 1594 aa7.9□□□□□ -1.14
RUNDC3A-207ENST00000593079 DCAF8L2P0C7V8 631 aa7.9□□□□□ -1.14
RUNDC3A-207ENST00000593079 SHROOM4Q9ULL8 1493 aa7.81□□□□□ -1.16
RUNDC3A-207ENST00000593079 SCRIBQ14160 1630 aa7.8□□□□□ -1.16
RUNDC3A-207ENST00000593079 PRKCSHP14314 528 aaPredicted RBP7.77□□□□□ -1.17
RUNDC3A-207ENST00000593079 UNC13AQ9UPW8 1703 aa7.72□□□□□ -1.17
RUNDC3A-207ENST00000593079 HRCP23327 699 aa7.71□□□□□ -1.18
RUNDC3A-207ENST00000593079 APLP2Q06481 763 aa7.71□□□□□ -1.18
RUNDC3A-207ENST00000593079 SLC24A1O60721 1099 aa7.65□□□□□ -1.18
RUNDC3A-207ENST00000593079 ERICH6Q7L0X2 663 aa7.65□□□□□ -1.18
RUNDC3A-207ENST00000593079 BAZ1AQ9NRL2 1556 aaPredicted RBP7.57□□□□□ -1.2
RUNDC3A-207ENST00000593079 SCAF1Q9H7N4 1312 aaKnown RBP7.55□□□□□ -1.2
RUNDC3A-207ENST00000593079 SUPT5HO00267 1087 aaKnown RBP7.53□□□□□ -1.2
RUNDC3A-207ENST00000593079 BCL11AQ9H165 835 aa7.53□□□□□ -1.2
RUNDC3A-207ENST00000593079 BICRAQ9NZM4 1560 aa7.51□□□□□ -1.21
RUNDC3A-207ENST00000593079 SMARCA4P51532 1647 aa7.5□□□□□ -1.21
RUNDC3A-207ENST00000593079 RSF1Q96T23 1441 aaPredicted RBP7.46□□□□□ -1.21
RUNDC3A-207ENST00000593079 FAM9AQ8IZU1 332 aaPredicted RBP7.45□□□□□ -1.22
RUNDC3A-207ENST00000593079 MROH2BQ7Z745 1585 aa7.43□□□□□ -1.22
RUNDC3A-207ENST00000593079 SMARCA2P51531 1590 aa7.42□□□□□ -1.22
RUNDC3A-207ENST00000593079 WIZO95785 1651 aa7.42□□□□□ -1.22
RUNDC3A-207ENST00000593079 CECR2Q9BXF3 1484 aa7.41□□□□□ -1.22
RUNDC3A-207ENST00000593079 TOP2AP11388 1531 aaKnown RBP7.41□□□□□ -1.22
RUNDC3A-207ENST00000593079 PEG3Q9GZU2 1588 aa7.41□□□□□ -1.22
RUNDC3A-207ENST00000593079 DAXXQ9UER7 740 aaPredicted RBP7.38□□□□□ -1.23
RUNDC3A-207ENST00000593079 PABPN1Q86U42 306 aaKnown RBP eCLIP7.37□□□□□ -1.23
RUNDC3A-207ENST00000593079 EIF4G1Q04637 1599 aaKnown RBP7.35□□□□□ -1.23
RUNDC3A-207ENST00000593079 HMGXB3Q12766 1538 aa7.33□□□□□ -1.24
RUNDC3A-207ENST00000593079 BAZ1BQ9UIG0 1483 aaKnown RBP7.33□□□□□ -1.24
RUNDC3A-207ENST00000593079 PPARGC1BQ86YN6 1023 aaKnown RBP7.31□□□□□ -1.24
RUNDC3A-207ENST00000593079 CENPBP07199 599 aaPredicted RBP7.29□□□□□ -1.24
RUNDC3A-207ENST00000593079 PRDM2Q13029 1718 aa7.29□□□□□ -1.24
RUNDC3A-207ENST00000593079 ATAD2BQ9ULI0 1458 aa7.29□□□□□ -1.24
RUNDC3A-207ENST00000593079 NCAPD3P42695 1498 aa7.24□□□□□ -1.25
RUNDC3A-207ENST00000593079 CC2D2AQ9P2K1 1620 aa7.23□□□□□ -1.25
RUNDC3A-207ENST00000593079 ACIN1Q9UKV3 1341 aaKnown RBP7.23□□□□□ -1.25
RUNDC3A-207ENST00000593079 CCDC88BA6NC98 1476 aa7.23□□□□□ -1.25
RUNDC3A-207ENST00000593079 CHIC1Q5VXU3 224 aa7.18□□□□□ -1.26
RUNDC3A-207ENST00000593079 ANP32EQ9BTT0 268 aa7.17□□□□□ -1.26
RUNDC3A-207ENST00000593079 TRIM41Q8WV44 630 aa7.15□□□□□ -1.26
RUNDC3A-207ENST00000593079 EIF5BO60841 1220 aaKnown RBP7.13□□□□□ -1.27
RUNDC3A-207ENST00000593079 ZEB1P37275 1124 aaPredicted RBP7.11□□□□□ -1.27
RUNDC3A-207ENST00000593079 NEUROD1Q13562 356 aa7.11□□□□□ -1.27
RUNDC3A-207ENST00000593079 EEA1Q15075 1411 aa7.1□□□□□ -1.27
RUNDC3A-207ENST00000593079 BIVM-ERCC5R4GMW8 1640 aa7.1□□□□□ -1.27
RUNDC3A-207ENST00000593079 LAMC3Q9Y6N6 1575 aa7.1□□□□□ -1.27
RUNDC3A-207ENST00000593079 WRNQ14191 1432 aaPredicted RBP eCLIP7.1□□□□□ -1.27
RUNDC3A-207ENST00000593079 ABCC8Q09428 1581 aa7.09□□□□□ -1.27
RUNDC3A-207ENST00000593079 GTF3C3Q9Y5Q9 886 aa7.09□□□□□ -1.27
RUNDC3A-207ENST00000593079 CFTRP13569 1480 aa7.09□□□□□ -1.27
RUNDC3A-207ENST00000593079 TOP2BQ02880 1626 aa7.09□□□□□ -1.28
RUNDC3A-207ENST00000593079 UBE2Q2Q8WVN8 375 aa7.08□□□□□ -1.28
RUNDC3A-207ENST00000593079 SYNJ1O43426 1573 aa7.05□□□□□ -1.28
RUNDC3A-207ENST00000593079 PCGF6Q9BYE7 350 aa7.05□□□□□ -1.28
RUNDC3A-207ENST00000593079 CADPSQ9ULU8 1353 aa7.05□□□□□ -1.28
RUNDC3A-207ENST00000593079 CSRNP3Q8WYN3 585 aa7.04□□□□□ -1.28
RUNDC3A-207ENST00000593079 CEP164Q9UPV0 1460 aa7.02□□□□□ -1.29
RUNDC3A-207ENST00000593079 PDS5BQ9NTI5 1447 aa7.01□□□□□ -1.29
RUNDC3A-207ENST00000593079 DNMBPQ6XZF7 1577 aa7.01□□□□□ -1.29
RUNDC3A-207ENST00000593079 FANCD2Q9BXW9 1451 aa7□□□□□ -1.29
RUNDC3A-207ENST00000593079 KIF21BO75037 1637 aa6.99□□□□□ -1.29
RUNDC3A-207ENST00000593079 KIF21AQ7Z4S6 1674 aa6.99□□□□□ -1.29
RUNDC3A-207ENST00000593079 CUX1P39880 1505 aa6.98□□□□□ -1.29
RUNDC3A-207ENST00000593079 GOLGA3Q08378 1498 aa6.97□□□□□ -1.29
RUNDC3A-207ENST00000593079 KIF27Q86VH2 1401 aa6.95□□□□□ -1.3
RUNDC3A-207ENST00000593079 ERICH3Q5RHP9 1530 aa6.95□□□□□ -1.3
RUNDC3A-207ENST00000593079 CUL7Q14999 1698 aa6.94□□□□□ -1.3
RUNDC3A-207ENST00000593079 WDR97A6NE52 1622 aa6.94□□□□□ -1.3
RUNDC3A-207ENST00000593079 PLEKHG5O94827 1062 aa6.93□□□□□ -1.3
RUNDC3A-207ENST00000593079 ANO8Q9HCE9 1232 aaPredicted RBP6.93□□□□□ -1.3
RUNDC3A-207ENST00000593079 FGD5Q6ZNL6 1462 aa6.92□□□□□ -1.3
RUNDC3A-207ENST00000593079 TOPBP1Q92547 1522 aa6.92□□□□□ -1.3
RUNDC3A-207ENST00000593079 NESP48681 1621 aa6.91□□□□□ -1.3
RUNDC3A-207ENST00000593079 ERCC6Q03468 1493 aa6.91□□□□□ -1.3
RUNDC3A-207ENST00000593079 MRC2Q9UBG0 1479 aa6.91□□□□□ -1.3
RUNDC3A-207ENST00000593079 SOGA1O94964 1423 aa6.9□□□□□ -1.31
RUNDC3A-207ENST00000593079 CUX2O14529 1486 aa6.89□□□□□ -1.31
RUNDC3A-207ENST00000593079 ABCA10Q8WWZ4 1543 aa6.89□□□□□ -1.31
RUNDC3A-207ENST00000593079 POLA1P09884 1462 aaPredicted RBP6.88□□□□□ -1.31
RUNDC3A-207ENST00000593079 PBRM1Q86U86 1689 aa6.87□□□□□ -1.31
RUNDC3A-207ENST00000593079 CTTNBP2Q8WZ74 1663 aa6.87□□□□□ -1.31
RUNDC3A-207ENST00000593079 WDR62O43379 1518 aa6.87□□□□□ -1.31
RUNDC3A-207ENST00000593079 TNIKQ9UKE5 1360 aa6.87□□□□□ -1.31
RUNDC3A-207ENST00000593079 ERICH6BQ5W0A0 696 aa6.87□□□□□ -1.31
RUNDC3A-207ENST00000593079 ABCA5Q8WWZ7 1642 aa6.87□□□□□ -1.31
RUNDC3A-207ENST00000593079 URB2Q14146 1524 aaKnown RBP6.86□□□□□ -1.31
RUNDC3A-207ENST00000593079 UBTFP17480 764 aaKnown RBP6.86□□□□□ -1.31
RUNDC3A-207ENST00000593079 CEP162Q5TB80 1403 aa6.85□□□□□ -1.31
RUNDC3A-207ENST00000593079 CLSPNQ9HAW4 1339 aa6.85□□□□□ -1.31
RUNDC3A-207ENST00000593079 PKNOX2Q96KN3 472 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms