RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 NISCHQ9Y2I1 1504 aa28.05■■■□□ 2.08
RANBP3-230ENST00000593025 ABCC9O60706 1549 aa25.91■■□□□ 1.74
RANBP3-230ENST00000593025 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
RANBP3-230ENST00000593025 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
RANBP3-230ENST00000593025 RB1CC1Q8TDY2 1594 aa24.4■■□□□ 1.5
RANBP3-230ENST00000593025 NACADO15069 1562 aa24.11■■□□□ 1.45
RANBP3-230ENST00000593025 PABPN1Q86U42 306 aaKnown RBP eCLIP23.99■■□□□ 1.437e-7■□□□□ 8.1
RANBP3-230ENST00000593025 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
RANBP3-230ENST00000593025 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
RANBP3-230ENST00000593025 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
RANBP3-230ENST00000593025 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
RANBP3-230ENST00000593025 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
RANBP3-230ENST00000593025 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
RANBP3-230ENST00000593025 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
RANBP3-230ENST00000593025 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
RANBP3-230ENST00000593025 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
RANBP3-230ENST00000593025 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
RANBP3-230ENST00000593025 SCRIBQ14160 1630 aa23.12■■□□□ 1.29
RANBP3-230ENST00000593025 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
RANBP3-230ENST00000593025 CUX2O14529 1486 aa22.53■■□□□ 1.2
RANBP3-230ENST00000593025 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
RANBP3-230ENST00000593025 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
RANBP3-230ENST00000593025 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
RANBP3-230ENST00000593025 NESP48681 1621 aa22.15■■□□□ 1.14
RANBP3-230ENST00000593025 HMGXB3Q12766 1538 aa22.09■■□□□ 1.13
RANBP3-230ENST00000593025 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.12
RANBP3-230ENST00000593025 SMARCA4P51532 1647 aa22.02■■□□□ 1.11
RANBP3-230ENST00000593025 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
RANBP3-230ENST00000593025 KIF21AQ7Z4S6 1674 aa21.87■■□□□ 1.09
RANBP3-230ENST00000593025 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
RANBP3-230ENST00000593025 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
RANBP3-230ENST00000593025 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
RANBP3-230ENST00000593025 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
RANBP3-230ENST00000593025 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
RANBP3-230ENST00000593025 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
RANBP3-230ENST00000593025 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.05
RANBP3-230ENST00000593025 WDR62O43379 1518 aa21.6■■□□□ 1.05
RANBP3-230ENST00000593025 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
RANBP3-230ENST00000593025 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
RANBP3-230ENST00000593025 CEP164Q9UPV0 1460 aa21.37■■□□□ 1.01
RANBP3-230ENST00000593025 WIZO95785 1651 aa21.35■■□□□ 1.01
RANBP3-230ENST00000593025 FANCD2Q9BXW9 1451 aa21.32■■□□□ 1
RANBP3-230ENST00000593025 OSCARQ8IYS5 282 aa21.31■■□□□ 1
RANBP3-230ENST00000593025 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
RANBP3-230ENST00000593025 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
RANBP3-230ENST00000593025 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
RANBP3-230ENST00000593025 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
RANBP3-230ENST00000593025 CFTRP13569 1480 aa21.23■□□□□ 0.99
RANBP3-230ENST00000593025 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
RANBP3-230ENST00000593025 ZNF608Q9ULD9 1512 aaPredicted RBP21.07■□□□□ 0.96
RANBP3-230ENST00000593025 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
RANBP3-230ENST00000593025 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
RANBP3-230ENST00000593025 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
RANBP3-230ENST00000593025 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.95
RANBP3-230ENST00000593025 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
RANBP3-230ENST00000593025 ARAP1Q96P48 1450 aa20.89■□□□□ 0.94
RANBP3-230ENST00000593025 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
RANBP3-230ENST00000593025 CHD1O14646 1710 aa20.87■□□□□ 0.93
RANBP3-230ENST00000593025 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
RANBP3-230ENST00000593025 TARBP1Q13395 1621 aaKnown RBP20.79■□□□□ 0.92
RANBP3-230ENST00000593025 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
RANBP3-230ENST00000593025 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
RANBP3-230ENST00000593025 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.913e-14■■■■□ 21.3
RANBP3-230ENST00000593025 TRHP20396 242 aaPredicted RBP20.74■□□□□ 0.91
RANBP3-230ENST00000593025 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
RANBP3-230ENST00000593025 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.9
RANBP3-230ENST00000593025 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
RANBP3-230ENST00000593025 FBLN2P98095 1184 aa20.58■□□□□ 0.89
RANBP3-230ENST00000593025 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
RANBP3-230ENST00000593025 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
RANBP3-230ENST00000593025 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
RANBP3-230ENST00000593025 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
RANBP3-230ENST00000593025 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
RANBP3-230ENST00000593025 WDR97A6NE52 1622 aa20.46■□□□□ 0.87
RANBP3-230ENST00000593025 SOGA1O94964 1423 aa20.45■□□□□ 0.86
RANBP3-230ENST00000593025 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
RANBP3-230ENST00000593025 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
RANBP3-230ENST00000593025 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
RANBP3-230ENST00000593025 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
RANBP3-230ENST00000593025 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
RANBP3-230ENST00000593025 CUX1P39880 1505 aa20.36■□□□□ 0.85
RANBP3-230ENST00000593025 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
RANBP3-230ENST00000593025 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
RANBP3-230ENST00000593025 ERCC6L2Q5T890 1561 aa20.3■□□□□ 0.84
RANBP3-230ENST00000593025 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
RANBP3-230ENST00000593025 KIF13AQ9H1H9 1805 aa20.17■□□□□ 0.82
RANBP3-230ENST00000593025 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
RANBP3-230ENST00000593025 CEP170Q5SW79 1584 aa20.16■□□□□ 0.82
RANBP3-230ENST00000593025 SHROOM2Q13796 1616 aa20.13■□□□□ 0.81
RANBP3-230ENST00000593025 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
RANBP3-230ENST00000593025 NUP160Q12769 1436 aa20.11■□□□□ 0.81
RANBP3-230ENST00000593025 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
RANBP3-230ENST00000593025 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
RANBP3-230ENST00000593025 ABCC10Q5T3U5 1492 aa19.92■□□□□ 0.78
RANBP3-230ENST00000593025 DIP2BQ9P265 1576 aa19.91■□□□□ 0.78
RANBP3-230ENST00000593025 PRG4Q92954 1404 aaPredicted RBP19.9■□□□□ 0.78
RANBP3-230ENST00000593025 WRNQ14191 1432 aaPredicted RBP eCLIP19.89■□□□□ 0.77
RANBP3-230ENST00000593025 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.77
RANBP3-230ENST00000593025 MAPKBP1O60336 1514 aa19.88■□□□□ 0.77
RANBP3-230ENST00000593025 ERICH3Q5RHP9 1530 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms