RNA–Protein interactions for RNA: ENST00000593019.1

RBFA-205, Transcript of ribosome binding factor A, humanhuman

TSL 2

Gene RBFA, Length 1,551 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFA-205ENST00000593019 NISCHQ9Y2I1 1504 aa30.48■■■□□ 2.47
RBFA-205ENST00000593019 CCDC180Q9P1Z9 1646 aa27.18■■□□□ 1.94
RBFA-205ENST00000593019 ABCC9O60706 1549 aa26.96■■□□□ 1.91
RBFA-205ENST00000593019 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
RBFA-205ENST00000593019 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
RBFA-205ENST00000593019 NACADO15069 1562 aa25.63■■□□□ 1.69
RBFA-205ENST00000593019 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
RBFA-205ENST00000593019 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
RBFA-205ENST00000593019 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
RBFA-205ENST00000593019 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
RBFA-205ENST00000593019 DCAF1Q9Y4B6 1507 aa25.16■■□□□ 1.62
RBFA-205ENST00000593019 DNAJC5BQ9UF47 199 aa25.06■■□□□ 1.6
RBFA-205ENST00000593019 BICRAQ9NZM4 1560 aa25.02■■□□□ 1.6
RBFA-205ENST00000593019 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
RBFA-205ENST00000593019 SHROOM4Q9ULL8 1493 aa24.62■■□□□ 1.53
RBFA-205ENST00000593019 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
RBFA-205ENST00000593019 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
RBFA-205ENST00000593019 CECR2Q9BXF3 1484 aa24.23■■□□□ 1.47
RBFA-205ENST00000593019 SMARCA4P51532 1647 aa23.71■■□□□ 1.39
RBFA-205ENST00000593019 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
RBFA-205ENST00000593019 ATAD2BQ9ULI0 1458 aa23.67■■□□□ 1.38
RBFA-205ENST00000593019 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
RBFA-205ENST00000593019 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
RBFA-205ENST00000593019 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
RBFA-205ENST00000593019 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
RBFA-205ENST00000593019 PEG3Q9GZU2 1588 aa23.45■■□□□ 1.35
RBFA-205ENST00000593019 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
RBFA-205ENST00000593019 NESP48681 1621 aa23.26■■□□□ 1.31
RBFA-205ENST00000593019 WIZO95785 1651 aa23.26■■□□□ 1.31
RBFA-205ENST00000593019 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
RBFA-205ENST00000593019 RSF1Q96T23 1441 aaPredicted RBP23.14■■□□□ 1.3
RBFA-205ENST00000593019 LAMC3Q9Y6N6 1575 aa23.07■■□□□ 1.28
RBFA-205ENST00000593019 CUX2O14529 1486 aa23.04■■□□□ 1.28
RBFA-205ENST00000593019 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
RBFA-205ENST00000593019 TOP2AP11388 1531 aaKnown RBP22.94■■□□□ 1.26
RBFA-205ENST00000593019 KIF21AQ7Z4S6 1674 aa22.94■■□□□ 1.26
RBFA-205ENST00000593019 PDS5BQ9NTI5 1447 aa22.94■■□□□ 1.26
RBFA-205ENST00000593019 THOC2Q8NI27 1593 aaKnown RBP22.92■■□□□ 1.26
RBFA-205ENST00000593019 CFTRP13569 1480 aa22.78■■□□□ 1.24
RBFA-205ENST00000593019 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
RBFA-205ENST00000593019 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
RBFA-205ENST00000593019 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
RBFA-205ENST00000593019 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
RBFA-205ENST00000593019 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
RBFA-205ENST00000593019 WDR62O43379 1518 aa22.66■■□□□ 1.22
RBFA-205ENST00000593019 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
RBFA-205ENST00000593019 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
RBFA-205ENST00000593019 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.18
RBFA-205ENST00000593019 TOPBP1Q92547 1522 aa22.33■■□□□ 1.16
RBFA-205ENST00000593019 ABCC8Q09428 1581 aa22.26■■□□□ 1.15
RBFA-205ENST00000593019 DNMBPQ6XZF7 1577 aa22.26■■□□□ 1.15
RBFA-205ENST00000593019 IFT140Q96RY7 1462 aa22.23■■□□□ 1.15
RBFA-205ENST00000593019 ZNF608Q9ULD9 1512 aaPredicted RBP22.22■■□□□ 1.15
RBFA-205ENST00000593019 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
RBFA-205ENST00000593019 TARBP1Q13395 1621 aaKnown RBP22.11■■□□□ 1.13
RBFA-205ENST00000593019 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
RBFA-205ENST00000593019 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
RBFA-205ENST00000593019 CUX1P39880 1505 aa22.07■■□□□ 1.12
RBFA-205ENST00000593019 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
RBFA-205ENST00000593019 AQRO60306 1485 aaKnown RBP eCLIP22.06■■□□□ 1.126e-10■■■■■ 27.6
RBFA-205ENST00000593019 SOGA1O94964 1423 aa22.04■■□□□ 1.12
RBFA-205ENST00000593019 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
RBFA-205ENST00000593019 TDRD9Q8NDG6 1382 aaKnown RBP21.98■■□□□ 1.11
RBFA-205ENST00000593019 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
RBFA-205ENST00000593019 CHD1O14646 1710 aa21.86■■□□□ 1.09
RBFA-205ENST00000593019 FBLN2P98095 1184 aa21.86■■□□□ 1.09
RBFA-205ENST00000593019 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
RBFA-205ENST00000593019 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
RBFA-205ENST00000593019 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
RBFA-205ENST00000593019 SYNJ1O43426 1573 aa21.79■■□□□ 1.08
RBFA-205ENST00000593019 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
RBFA-205ENST00000593019 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
RBFA-205ENST00000593019 TOP2BQ02880 1626 aa21.77■■□□□ 1.08
RBFA-205ENST00000593019 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.08
RBFA-205ENST00000593019 GAPVD1Q14C86 1478 aa21.76■■□□□ 1.07
RBFA-205ENST00000593019 RIMBP3CA6NJZ7 1639 aa21.76■■□□□ 1.07
RBFA-205ENST00000593019 RIMBP3BA6NNM3 1639 aa21.76■■□□□ 1.07
RBFA-205ENST00000593019 RIMBP3Q9UFD9 1639 aa21.76■■□□□ 1.07
RBFA-205ENST00000593019 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
RBFA-205ENST00000593019 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
RBFA-205ENST00000593019 ABCA5Q8WWZ7 1642 aa21.72■■□□□ 1.07
RBFA-205ENST00000593019 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
RBFA-205ENST00000593019 ARHGEF11O15085 1522 aa21.72■■□□□ 1.07
RBFA-205ENST00000593019 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
RBFA-205ENST00000593019 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
RBFA-205ENST00000593019 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
RBFA-205ENST00000593019 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
RBFA-205ENST00000593019 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
RBFA-205ENST00000593019 GRIN2AQ12879 1464 aa21.51■■□□□ 1.03
RBFA-205ENST00000593019 ERICH3Q5RHP9 1530 aa21.5■■□□□ 1.03
RBFA-205ENST00000593019 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
RBFA-205ENST00000593019 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
RBFA-205ENST00000593019 NUP160Q12769 1436 aa21.43■■□□□ 1.02
RBFA-205ENST00000593019 KIF27Q86VH2 1401 aa21.36■■□□□ 1.01
RBFA-205ENST00000593019 IGF1RP08069 1367 aa21.35■■□□□ 1.01
RBFA-205ENST00000593019 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
RBFA-205ENST00000593019 SHROOM2Q13796 1616 aa21.29■■□□□ 1
RBFA-205ENST00000593019 CUL7Q14999 1698 aa21.25■□□□□ 0.99
RBFA-205ENST00000593019 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
RBFA-205ENST00000593019 JPH4Q96JJ6 628 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms