RNA–Protein interactions for RNA: ENST00000592944.1

ITGA2B-210, Transcript of integrin subunit alpha 2b, humanhuman

TSL 5

Gene ITGA2B, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA2B-210ENST00000592944 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
ITGA2B-210ENST00000592944 CCDC180Q9P1Z9 1646 aa33.67■■■□□ 2.98
ITGA2B-210ENST00000592944 ABCC9O60706 1549 aa32.8■■■□□ 2.84
ITGA2B-210ENST00000592944 RB1CC1Q8TDY2 1594 aa31.64■■■□□ 2.65
ITGA2B-210ENST00000592944 NACADO15069 1562 aa31.62■■■□□ 2.65
ITGA2B-210ENST00000592944 ZCCHC6Q5VYS8 1495 aaKnown RBP31.57■■■□□ 2.64
ITGA2B-210ENST00000592944 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
ITGA2B-210ENST00000592944 MYO15BQ96JP2 1530 aa31.48■■■□□ 2.63
ITGA2B-210ENST00000592944 DCAF1Q9Y4B6 1507 aa31.37■■■□□ 2.61
ITGA2B-210ENST00000592944 UNC13AQ9UPW8 1703 aa30.88■■■□□ 2.53
ITGA2B-210ENST00000592944 SCRIBQ14160 1630 aa30.69■■■□□ 2.5
ITGA2B-210ENST00000592944 BICRAQ9NZM4 1560 aa30.64■■■□□ 2.5
ITGA2B-210ENST00000592944 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
ITGA2B-210ENST00000592944 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
ITGA2B-210ENST00000592944 DNAJC5BQ9UF47 199 aa29.97■■■□□ 2.39
ITGA2B-210ENST00000592944 EIF4G1Q04637 1599 aaKnown RBP29.84■■■□□ 2.37
ITGA2B-210ENST00000592944 CC2D2AQ9P2K1 1620 aa29.69■■■□□ 2.34
ITGA2B-210ENST00000592944 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
ITGA2B-210ENST00000592944 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
ITGA2B-210ENST00000592944 BAZ1AQ9NRL2 1556 aaPredicted RBP29.37■■■□□ 2.29
ITGA2B-210ENST00000592944 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
ITGA2B-210ENST00000592944 ATAD2BQ9ULI0 1458 aa29.18■■■□□ 2.26
ITGA2B-210ENST00000592944 MROH2BQ7Z745 1585 aa29.17■■■□□ 2.26
ITGA2B-210ENST00000592944 NCAPD3P42695 1498 aa29.16■■■□□ 2.26
ITGA2B-210ENST00000592944 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
ITGA2B-210ENST00000592944 HMGXB3Q12766 1538 aa29.04■■■□□ 2.24
ITGA2B-210ENST00000592944 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
ITGA2B-210ENST00000592944 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
ITGA2B-210ENST00000592944 WIZO95785 1651 aa28.86■■■□□ 2.21
ITGA2B-210ENST00000592944 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
ITGA2B-210ENST00000592944 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
ITGA2B-210ENST00000592944 NESP48681 1621 aa28.4■■■□□ 2.14
ITGA2B-210ENST00000592944 CADPSQ9ULU8 1353 aa28.31■■■□□ 2.12
ITGA2B-210ENST00000592944 ERCC6Q03468 1493 aa28.29■■■□□ 2.12
ITGA2B-210ENST00000592944 CCDC88BA6NC98 1476 aa28.22■■■□□ 2.11
ITGA2B-210ENST00000592944 PDS5BQ9NTI5 1447 aa28.2■■■□□ 2.11
ITGA2B-210ENST00000592944 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
ITGA2B-210ENST00000592944 CFTRP13569 1480 aa28.16■■■□□ 2.1
ITGA2B-210ENST00000592944 KIF21AQ7Z4S6 1674 aa28.09■■■□□ 2.09
ITGA2B-210ENST00000592944 FANCD2Q9BXW9 1451 aa27.99■■■□□ 2.07
ITGA2B-210ENST00000592944 THOC2Q8NI27 1593 aaKnown RBP27.99■■■□□ 2.07
ITGA2B-210ENST00000592944 CUX2O14529 1486 aa27.98■■■□□ 2.07
ITGA2B-210ENST00000592944 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
ITGA2B-210ENST00000592944 CEP164Q9UPV0 1460 aa27.96■■■□□ 2.07
ITGA2B-210ENST00000592944 MRC2Q9UBG0 1479 aa27.9■■■□□ 2.06
ITGA2B-210ENST00000592944 WDR62O43379 1518 aa27.81■■■□□ 2.04
ITGA2B-210ENST00000592944 URB2Q14146 1524 aaKnown RBP27.69■■■□□ 2.02
ITGA2B-210ENST00000592944 ABCC8Q09428 1581 aa27.59■■■□□ 2.01
ITGA2B-210ENST00000592944 TOPBP1Q92547 1522 aa27.55■■■□□ 2
ITGA2B-210ENST00000592944 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
ITGA2B-210ENST00000592944 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
ITGA2B-210ENST00000592944 CUX1P39880 1505 aa27.36■■□□□ 1.97
ITGA2B-210ENST00000592944 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
ITGA2B-210ENST00000592944 FGD5Q6ZNL6 1462 aa27.26■■□□□ 1.95
ITGA2B-210ENST00000592944 TARBP1Q13395 1621 aaKnown RBP27.25■■□□□ 1.95
ITGA2B-210ENST00000592944 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
ITGA2B-210ENST00000592944 SOGA1O94964 1423 aa27.21■■□□□ 1.95
ITGA2B-210ENST00000592944 ZNF608Q9ULD9 1512 aaPredicted RBP27.2■■□□□ 1.94
ITGA2B-210ENST00000592944 BIVM-ERCC5R4GMW8 1640 aa27.18■■□□□ 1.94
ITGA2B-210ENST00000592944 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
ITGA2B-210ENST00000592944 TOP2BQ02880 1626 aa27.17■■□□□ 1.94
ITGA2B-210ENST00000592944 SYNJ1O43426 1573 aa27.15■■□□□ 1.94
ITGA2B-210ENST00000592944 EIF4G3O43432 1585 aaKnown RBP27.13■■□□□ 1.93
ITGA2B-210ENST00000592944 WDR97A6NE52 1622 aa27.08■■□□□ 1.93
ITGA2B-210ENST00000592944 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.922e-7■■■■■ 43.2
ITGA2B-210ENST00000592944 ABCA10Q8WWZ4 1543 aa27.02■■□□□ 1.92
ITGA2B-210ENST00000592944 TDRD9Q8NDG6 1382 aaKnown RBP27.02■■□□□ 1.92
ITGA2B-210ENST00000592944 DNAJC5Q9H3Z4 198 aa26.96■■□□□ 1.91
ITGA2B-210ENST00000592944 GAPVD1Q14C86 1478 aa26.91■■□□□ 1.9
ITGA2B-210ENST00000592944 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
ITGA2B-210ENST00000592944 GRIN2BQ13224 1484 aa26.9■■□□□ 1.9
ITGA2B-210ENST00000592944 PBRM1Q86U86 1689 aa26.85■■□□□ 1.89
ITGA2B-210ENST00000592944 SNAPC4Q5SXM2 1469 aa26.83■■□□□ 1.89
ITGA2B-210ENST00000592944 MAGI1Q96QZ7 1491 aaPredicted RBP26.82■■□□□ 1.88
ITGA2B-210ENST00000592944 OSCARQ8IYS5 282 aa26.8■■□□□ 1.88
ITGA2B-210ENST00000592944 CHD1O14646 1710 aa26.76■■□□□ 1.87
ITGA2B-210ENST00000592944 SYNJ2O15056 1496 aa26.71■■□□□ 1.87
ITGA2B-210ENST00000592944 FBLN2P98095 1184 aa26.71■■□□□ 1.87
ITGA2B-210ENST00000592944 ERICH3Q5RHP9 1530 aa26.7■■□□□ 1.87
ITGA2B-210ENST00000592944 KIF27Q86VH2 1401 aa26.67■■□□□ 1.86
ITGA2B-210ENST00000592944 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
ITGA2B-210ENST00000592944 ADAMTS12P58397 1594 aa26.65■■□□□ 1.86
ITGA2B-210ENST00000592944 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
ITGA2B-210ENST00000592944 FHAD1B1AJZ9 1412 aa26.6■■□□□ 1.85
ITGA2B-210ENST00000592944 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
ITGA2B-210ENST00000592944 IGF1RP08069 1367 aa26.51■■□□□ 1.83
ITGA2B-210ENST00000592944 CUL7Q14999 1698 aa26.5■■□□□ 1.83
ITGA2B-210ENST00000592944 CLASP1Q7Z460 1538 aa26.49■■□□□ 1.83
ITGA2B-210ENST00000592944 NUP160Q12769 1436 aa26.42■■□□□ 1.82
ITGA2B-210ENST00000592944 RUSC2Q8N2Y8 1516 aa26.4■■□□□ 1.82
ITGA2B-210ENST00000592944 CEP170Q5SW79 1584 aa26.4■■□□□ 1.82
ITGA2B-210ENST00000592944 CARMIL1Q5VZK9 1371 aa26.38■■□□□ 1.81
ITGA2B-210ENST00000592944 ARHGEF11O15085 1522 aa26.38■■□□□ 1.81
ITGA2B-210ENST00000592944 RIMBP3CA6NJZ7 1639 aa26.36■■□□□ 1.81
ITGA2B-210ENST00000592944 RIMBP3BA6NNM3 1639 aa26.36■■□□□ 1.81
ITGA2B-210ENST00000592944 RIMBP3Q9UFD9 1639 aa26.36■■□□□ 1.81
ITGA2B-210ENST00000592944 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
ITGA2B-210ENST00000592944 RAPGEF2Q9Y4G8 1499 aa26.24■■□□□ 1.79
ITGA2B-210ENST00000592944 EEA1Q15075 1411 aa26.24■■□□□ 1.79
ITGA2B-210ENST00000592944 SHROOM2Q13796 1616 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms