RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 NISCHQ9Y2I1 1504 aa37.21■■■■□ 3.55
TRIM47-206ENST00000592942 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.86
TRIM47-206ENST00000592942 ABCC9O60706 1549 aa32.3■■■□□ 2.76
TRIM47-206ENST00000592942 DCAF8L2P0C7V8 631 aa31.1■■■□□ 2.57
TRIM47-206ENST00000592942 NACADO15069 1562 aa31.03■■■□□ 2.56
TRIM47-206ENST00000592942 RB1CC1Q8TDY2 1594 aa31.01■■■□□ 2.56
TRIM47-206ENST00000592942 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
TRIM47-206ENST00000592942 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
TRIM47-206ENST00000592942 DCAF1Q9Y4B6 1507 aa30.77■■■□□ 2.52
TRIM47-206ENST00000592942 UNC13AQ9UPW8 1703 aa30.34■■■□□ 2.45
TRIM47-206ENST00000592942 PABPN1Q86U42 306 aaKnown RBP eCLIP30.27■■■□□ 2.44
TRIM47-206ENST00000592942 DNAJC5BQ9UF47 199 aa30.22■■■□□ 2.43
TRIM47-206ENST00000592942 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
TRIM47-206ENST00000592942 SCRIBQ14160 1630 aa30.1■■■□□ 2.41
TRIM47-206ENST00000592942 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
TRIM47-206ENST00000592942 EIF4G1Q04637 1599 aaKnown RBP29.32■■■□□ 2.28
TRIM47-206ENST00000592942 CC2D2AQ9P2K1 1620 aa29.2■■■□□ 2.27
TRIM47-206ENST00000592942 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
TRIM47-206ENST00000592942 SMARCA4P51532 1647 aa28.82■■■□□ 2.2
TRIM47-206ENST00000592942 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
TRIM47-206ENST00000592942 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
TRIM47-206ENST00000592942 MROH2BQ7Z745 1585 aa28.71■■■□□ 2.19
TRIM47-206ENST00000592942 NCAPD3P42695 1498 aa28.7■■■□□ 2.18
TRIM47-206ENST00000592942 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
TRIM47-206ENST00000592942 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
TRIM47-206ENST00000592942 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
TRIM47-206ENST00000592942 RSF1Q96T23 1441 aaPredicted RBP28.42■■■□□ 2.14
TRIM47-206ENST00000592942 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
TRIM47-206ENST00000592942 WIZO95785 1651 aa28.36■■■□□ 2.13
TRIM47-206ENST00000592942 DNAJC5Q9H3Z4 198 aa28.12■■■□□ 2.09
TRIM47-206ENST00000592942 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
TRIM47-206ENST00000592942 NESP48681 1621 aa28■■■□□ 2.07
TRIM47-206ENST00000592942 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
TRIM47-206ENST00000592942 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
TRIM47-206ENST00000592942 CCDC88BA6NC98 1476 aa27.78■■■□□ 2.04
TRIM47-206ENST00000592942 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
TRIM47-206ENST00000592942 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
TRIM47-206ENST00000592942 CFTRP13569 1480 aa27.7■■■□□ 2.02
TRIM47-206ENST00000592942 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
TRIM47-206ENST00000592942 KIF21AQ7Z4S6 1674 aa27.58■■■□□ 2.01
TRIM47-206ENST00000592942 CUX2O14529 1486 aa27.51■■□□□ 1.99
TRIM47-206ENST00000592942 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
TRIM47-206ENST00000592942 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
TRIM47-206ENST00000592942 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
TRIM47-206ENST00000592942 MRC2Q9UBG0 1479 aa27.38■■□□□ 1.97
TRIM47-206ENST00000592942 PRDM2Q13029 1718 aa27.35■■□□□ 1.97
TRIM47-206ENST00000592942 WDR62O43379 1518 aa27.3■■□□□ 1.96
TRIM47-206ENST00000592942 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
TRIM47-206ENST00000592942 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
TRIM47-206ENST00000592942 ABCC8Q09428 1581 aa27.04■■□□□ 1.92
TRIM47-206ENST00000592942 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
TRIM47-206ENST00000592942 CUX1P39880 1505 aa26.9■■□□□ 1.9
TRIM47-206ENST00000592942 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
TRIM47-206ENST00000592942 POLA1P09884 1462 aaPredicted RBP26.85■■□□□ 1.89
TRIM47-206ENST00000592942 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
TRIM47-206ENST00000592942 FGD5Q6ZNL6 1462 aa26.78■■□□□ 1.88
TRIM47-206ENST00000592942 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
TRIM47-206ENST00000592942 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
TRIM47-206ENST00000592942 SOGA1O94964 1423 aa26.77■■□□□ 1.88
TRIM47-206ENST00000592942 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
TRIM47-206ENST00000592942 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.869e-8■■■■■ 36.6
TRIM47-206ENST00000592942 SYNJ1O43426 1573 aa26.66■■□□□ 1.86
TRIM47-206ENST00000592942 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
TRIM47-206ENST00000592942 TOP2BQ02880 1626 aa26.64■■□□□ 1.85
TRIM47-206ENST00000592942 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
TRIM47-206ENST00000592942 BIVM-ERCC5R4GMW8 1640 aa26.61■■□□□ 1.85
TRIM47-206ENST00000592942 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
TRIM47-206ENST00000592942 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
TRIM47-206ENST00000592942 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
TRIM47-206ENST00000592942 OSCARQ8IYS5 282 aa26.43■■□□□ 1.82
TRIM47-206ENST00000592942 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
TRIM47-206ENST00000592942 GRIN2BQ13224 1484 aa26.4■■□□□ 1.82
TRIM47-206ENST00000592942 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.81
TRIM47-206ENST00000592942 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
TRIM47-206ENST00000592942 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
TRIM47-206ENST00000592942 FBLN2P98095 1184 aa26.3■■□□□ 1.8
TRIM47-206ENST00000592942 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
TRIM47-206ENST00000592942 CHD1O14646 1710 aa26.25■■□□□ 1.79
TRIM47-206ENST00000592942 CHMP7Q8WUX9 453 aaPredicted RBP26.24■■□□□ 1.79
TRIM47-206ENST00000592942 SYNJ2O15056 1496 aa26.22■■□□□ 1.79
TRIM47-206ENST00000592942 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
TRIM47-206ENST00000592942 KIF27Q86VH2 1401 aa26.15■■□□□ 1.78
TRIM47-206ENST00000592942 IGF1RP08069 1367 aa26.15■■□□□ 1.78
TRIM47-206ENST00000592942 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
TRIM47-206ENST00000592942 ADAMTS12P58397 1594 aa26.11■■□□□ 1.77
TRIM47-206ENST00000592942 GRIN2AQ12879 1464 aa26.06■■□□□ 1.76
TRIM47-206ENST00000592942 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
TRIM47-206ENST00000592942 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
TRIM47-206ENST00000592942 NUP160Q12769 1436 aa25.98■■□□□ 1.75
TRIM47-206ENST00000592942 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
TRIM47-206ENST00000592942 CARMIL1Q5VZK9 1371 aa25.95■■□□□ 1.74
TRIM47-206ENST00000592942 ARHGEF11O15085 1522 aa25.94■■□□□ 1.74
TRIM47-206ENST00000592942 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
TRIM47-206ENST00000592942 RIMBP3CA6NJZ7 1639 aa25.93■■□□□ 1.74
TRIM47-206ENST00000592942 RIMBP3BA6NNM3 1639 aa25.93■■□□□ 1.74
TRIM47-206ENST00000592942 RIMBP3Q9UFD9 1639 aa25.93■■□□□ 1.74
TRIM47-206ENST00000592942 CUL7Q14999 1698 aa25.9■■□□□ 1.74
TRIM47-206ENST00000592942 CYB5RLQ6IPT4 315 aa25.78■■□□□ 1.72
TRIM47-206ENST00000592942 JPH4Q96JJ6 628 aa25.78■■□□□ 1.72
TRIM47-206ENST00000592942 ARAP1Q96P48 1450 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms