RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
SMCO4P1-201ENST00000592909 ABCC9O60706 1549 aa23.85■■□□□ 1.41
SMCO4P1-201ENST00000592909 CCDC180Q9P1Z9 1646 aa23.38■■□□□ 1.33
SMCO4P1-201ENST00000592909 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
SMCO4P1-201ENST00000592909 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
SMCO4P1-201ENST00000592909 NACADO15069 1562 aa22.29■■□□□ 1.16
SMCO4P1-201ENST00000592909 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
SMCO4P1-201ENST00000592909 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
SMCO4P1-201ENST00000592909 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
SMCO4P1-201ENST00000592909 BICRAQ9NZM4 1560 aa21.87■■□□□ 1.09
SMCO4P1-201ENST00000592909 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
SMCO4P1-201ENST00000592909 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.05
SMCO4P1-201ENST00000592909 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
SMCO4P1-201ENST00000592909 CC2D2AQ9P2K1 1620 aa21.5■■□□□ 1.03
SMCO4P1-201ENST00000592909 DCAF1Q9Y4B6 1507 aa21.44■■□□□ 1.02
SMCO4P1-201ENST00000592909 ZCCHC6Q5VYS8 1495 aaKnown RBP21.41■■□□□ 1.02
SMCO4P1-201ENST00000592909 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
SMCO4P1-201ENST00000592909 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
SMCO4P1-201ENST00000592909 SCRIBQ14160 1630 aa21.27■■□□□ 1
SMCO4P1-201ENST00000592909 CUX2O14529 1486 aa20.76■□□□□ 0.91
SMCO4P1-201ENST00000592909 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
SMCO4P1-201ENST00000592909 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
SMCO4P1-201ENST00000592909 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
SMCO4P1-201ENST00000592909 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
SMCO4P1-201ENST00000592909 SMARCA2P51531 1590 aa20.37■□□□□ 0.85
SMCO4P1-201ENST00000592909 NESP48681 1621 aa20.36■□□□□ 0.85
SMCO4P1-201ENST00000592909 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
SMCO4P1-201ENST00000592909 BAZ1BQ9UIG0 1483 aaKnown RBP20.22■□□□□ 0.83
SMCO4P1-201ENST00000592909 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
SMCO4P1-201ENST00000592909 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
SMCO4P1-201ENST00000592909 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
SMCO4P1-201ENST00000592909 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
SMCO4P1-201ENST00000592909 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
SMCO4P1-201ENST00000592909 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
SMCO4P1-201ENST00000592909 KIF21AQ7Z4S6 1674 aa19.99■□□□□ 0.79
SMCO4P1-201ENST00000592909 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
SMCO4P1-201ENST00000592909 MROH2BQ7Z745 1585 aa19.97■□□□□ 0.79
SMCO4P1-201ENST00000592909 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
SMCO4P1-201ENST00000592909 WDR62O43379 1518 aa19.88■□□□□ 0.77
SMCO4P1-201ENST00000592909 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
SMCO4P1-201ENST00000592909 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
SMCO4P1-201ENST00000592909 FANCD2Q9BXW9 1451 aa19.71■□□□□ 0.75
SMCO4P1-201ENST00000592909 WIZO95785 1651 aa19.66■□□□□ 0.74
SMCO4P1-201ENST00000592909 CFTRP13569 1480 aa19.66■□□□□ 0.74
SMCO4P1-201ENST00000592909 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
SMCO4P1-201ENST00000592909 RIMBP3CA6NJZ7 1639 aa19.46■□□□□ 0.71
SMCO4P1-201ENST00000592909 RIMBP3BA6NNM3 1639 aa19.46■□□□□ 0.71
SMCO4P1-201ENST00000592909 RIMBP3Q9UFD9 1639 aa19.46■□□□□ 0.71
SMCO4P1-201ENST00000592909 RSF1Q96T23 1441 aaPredicted RBP19.45■□□□□ 0.7
SMCO4P1-201ENST00000592909 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
SMCO4P1-201ENST00000592909 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
SMCO4P1-201ENST00000592909 ARHGEF11O15085 1522 aa19.41■□□□□ 0.7
SMCO4P1-201ENST00000592909 ZNF608Q9ULD9 1512 aaPredicted RBP19.4■□□□□ 0.7
SMCO4P1-201ENST00000592909 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
SMCO4P1-201ENST00000592909 TOPBP1Q92547 1522 aa19.29■□□□□ 0.68
SMCO4P1-201ENST00000592909 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
SMCO4P1-201ENST00000592909 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
SMCO4P1-201ENST00000592909 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
SMCO4P1-201ENST00000592909 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
SMCO4P1-201ENST00000592909 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
SMCO4P1-201ENST00000592909 ARAP1Q96P48 1450 aa19.19■□□□□ 0.66
SMCO4P1-201ENST00000592909 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
SMCO4P1-201ENST00000592909 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
SMCO4P1-201ENST00000592909 FBLN2P98095 1184 aa19.14■□□□□ 0.65
SMCO4P1-201ENST00000592909 TARBP1Q13395 1621 aaKnown RBP19.11■□□□□ 0.65
SMCO4P1-201ENST00000592909 CHD1O14646 1710 aa19.08■□□□□ 0.65
SMCO4P1-201ENST00000592909 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
SMCO4P1-201ENST00000592909 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
SMCO4P1-201ENST00000592909 SOGA1O94964 1423 aa19■□□□□ 0.63
SMCO4P1-201ENST00000592909 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
SMCO4P1-201ENST00000592909 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
SMCO4P1-201ENST00000592909 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
SMCO4P1-201ENST00000592909 CLASP1Q7Z460 1538 aa18.95■□□□□ 0.62
SMCO4P1-201ENST00000592909 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
SMCO4P1-201ENST00000592909 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
SMCO4P1-201ENST00000592909 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
SMCO4P1-201ENST00000592909 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
SMCO4P1-201ENST00000592909 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
SMCO4P1-201ENST00000592909 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
SMCO4P1-201ENST00000592909 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
SMCO4P1-201ENST00000592909 GAPVD1Q14C86 1478 aa18.81■□□□□ 0.6
SMCO4P1-201ENST00000592909 CUX1P39880 1505 aa18.79■□□□□ 0.6
SMCO4P1-201ENST00000592909 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
SMCO4P1-201ENST00000592909 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
SMCO4P1-201ENST00000592909 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
SMCO4P1-201ENST00000592909 ERCC6L2Q5T890 1561 aa18.61■□□□□ 0.57
SMCO4P1-201ENST00000592909 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
SMCO4P1-201ENST00000592909 NUP160Q12769 1436 aa18.59■□□□□ 0.57
SMCO4P1-201ENST00000592909 CEP170Q5SW79 1584 aa18.55■□□□□ 0.56
SMCO4P1-201ENST00000592909 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
SMCO4P1-201ENST00000592909 FHAD1B1AJZ9 1412 aa18.5■□□□□ 0.55
SMCO4P1-201ENST00000592909 ADAMTS12P58397 1594 aa18.5■□□□□ 0.55
SMCO4P1-201ENST00000592909 SHROOM2Q13796 1616 aa18.49■□□□□ 0.55
SMCO4P1-201ENST00000592909 PRG4Q92954 1404 aaPredicted RBP18.44■□□□□ 0.54
SMCO4P1-201ENST00000592909 JPH4Q96JJ6 628 aa18.44■□□□□ 0.54
SMCO4P1-201ENST00000592909 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
SMCO4P1-201ENST00000592909 KIF13AQ9H1H9 1805 aa18.4■□□□□ 0.54
SMCO4P1-201ENST00000592909 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
SMCO4P1-201ENST00000592909 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.54
SMCO4P1-201ENST00000592909 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms