RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
ERCC1-217ENST00000592905 CCDC180Q9P1Z9 1646 aa32.63■■■□□ 2.81
ERCC1-217ENST00000592905 ABCC9O60706 1549 aa32.06■■■□□ 2.72
ERCC1-217ENST00000592905 DCAF8L2P0C7V8 631 aa30.88■■■□□ 2.53
ERCC1-217ENST00000592905 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
ERCC1-217ENST00000592905 NACADO15069 1562 aa30.68■■■□□ 2.5
ERCC1-217ENST00000592905 ZCCHC6Q5VYS8 1495 aaKnown RBP30.57■■■□□ 2.48
ERCC1-217ENST00000592905 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
ERCC1-217ENST00000592905 DCAF1Q9Y4B6 1507 aa30.32■■■□□ 2.44
ERCC1-217ENST00000592905 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
ERCC1-217ENST00000592905 PABPN1Q86U42 306 aaKnown RBP eCLIP30.01■■■□□ 2.39
ERCC1-217ENST00000592905 SCRIBQ14160 1630 aa29.89■■■□□ 2.37
ERCC1-217ENST00000592905 BICRAQ9NZM4 1560 aa29.86■■■□□ 2.37
ERCC1-217ENST00000592905 DNAJC5BQ9UF47 199 aa29.49■■■□□ 2.31
ERCC1-217ENST00000592905 SHROOM4Q9ULL8 1493 aa29.36■■■□□ 2.29
ERCC1-217ENST00000592905 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
ERCC1-217ENST00000592905 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
ERCC1-217ENST00000592905 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.19
ERCC1-217ENST00000592905 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
ERCC1-217ENST00000592905 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.15
ERCC1-217ENST00000592905 ATAD2BQ9ULI0 1458 aa28.37■■■□□ 2.13
ERCC1-217ENST00000592905 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
ERCC1-217ENST00000592905 NCAPD3P42695 1498 aa28.32■■■□□ 2.12
ERCC1-217ENST00000592905 SMARCA2P51531 1590 aa28.29■■■□□ 2.12
ERCC1-217ENST00000592905 PEG3Q9GZU2 1588 aa28.18■■■□□ 2.1
ERCC1-217ENST00000592905 HMGXB3Q12766 1538 aa28.16■■■□□ 2.1
ERCC1-217ENST00000592905 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
ERCC1-217ENST00000592905 WIZO95785 1651 aa28.1■■■□□ 2.09
ERCC1-217ENST00000592905 RSF1Q96T23 1441 aaPredicted RBP28.01■■■□□ 2.08
ERCC1-217ENST00000592905 NESP48681 1621 aa27.76■■■□□ 2.03
ERCC1-217ENST00000592905 TOP2AP11388 1531 aaKnown RBP27.71■■■□□ 2.03
ERCC1-217ENST00000592905 ERCC6Q03468 1493 aa27.59■■■□□ 2.01
ERCC1-217ENST00000592905 LAMC3Q9Y6N6 1575 aa27.58■■■□□ 2.01
ERCC1-217ENST00000592905 CADPSQ9ULU8 1353 aa27.52■■■□□ 2
ERCC1-217ENST00000592905 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
ERCC1-217ENST00000592905 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
ERCC1-217ENST00000592905 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
ERCC1-217ENST00000592905 PDS5BQ9NTI5 1447 aa27.4■■□□□ 1.98
ERCC1-217ENST00000592905 CFTRP13569 1480 aa27.33■■□□□ 1.97
ERCC1-217ENST00000592905 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.96
ERCC1-217ENST00000592905 CUX2O14529 1486 aa27.23■■□□□ 1.95
ERCC1-217ENST00000592905 FANCD2Q9BXW9 1451 aa27.22■■□□□ 1.95
ERCC1-217ENST00000592905 PRDM2Q13029 1718 aa27.18■■□□□ 1.94
ERCC1-217ENST00000592905 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
ERCC1-217ENST00000592905 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
ERCC1-217ENST00000592905 WDR62O43379 1518 aa27.03■■□□□ 1.92
ERCC1-217ENST00000592905 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
ERCC1-217ENST00000592905 TOPBP1Q92547 1522 aa26.79■■□□□ 1.88
ERCC1-217ENST00000592905 DNMBPQ6XZF7 1577 aa26.74■■□□□ 1.87
ERCC1-217ENST00000592905 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
ERCC1-217ENST00000592905 CUX1P39880 1505 aa26.6■■□□□ 1.85
ERCC1-217ENST00000592905 IFT140Q96RY7 1462 aa26.58■■□□□ 1.85
ERCC1-217ENST00000592905 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
ERCC1-217ENST00000592905 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
ERCC1-217ENST00000592905 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
ERCC1-217ENST00000592905 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
ERCC1-217ENST00000592905 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
ERCC1-217ENST00000592905 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
ERCC1-217ENST00000592905 SOGA1O94964 1423 aa26.48■■□□□ 1.83
ERCC1-217ENST00000592905 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.822e-7■■■■■ 39
ERCC1-217ENST00000592905 EIF4G3O43432 1585 aaKnown RBP26.41■■□□□ 1.82
ERCC1-217ENST00000592905 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
ERCC1-217ENST00000592905 SYNJ1O43426 1573 aa26.38■■□□□ 1.81
ERCC1-217ENST00000592905 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
ERCC1-217ENST00000592905 TOP2BQ02880 1626 aa26.34■■□□□ 1.81
ERCC1-217ENST00000592905 BIVM-ERCC5R4GMW8 1640 aa26.34■■□□□ 1.81
ERCC1-217ENST00000592905 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
ERCC1-217ENST00000592905 ABCA10Q8WWZ4 1543 aa26.2■■□□□ 1.79
ERCC1-217ENST00000592905 OSCARQ8IYS5 282 aa26.18■■□□□ 1.78
ERCC1-217ENST00000592905 GAPVD1Q14C86 1478 aa26.15■■□□□ 1.78
ERCC1-217ENST00000592905 FBLN2P98095 1184 aa26.14■■□□□ 1.78
ERCC1-217ENST00000592905 CHD1O14646 1710 aa26.14■■□□□ 1.77
ERCC1-217ENST00000592905 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
ERCC1-217ENST00000592905 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
ERCC1-217ENST00000592905 SNAPC4Q5SXM2 1469 aa26.12■■□□□ 1.77
ERCC1-217ENST00000592905 ABCA5Q8WWZ7 1642 aa26.12■■□□□ 1.77
ERCC1-217ENST00000592905 MAGI1Q96QZ7 1491 aaPredicted RBP26.03■■□□□ 1.76
ERCC1-217ENST00000592905 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
ERCC1-217ENST00000592905 SYNJ2O15056 1496 aa25.94■■□□□ 1.74
ERCC1-217ENST00000592905 ERICH3Q5RHP9 1530 aa25.88■■□□□ 1.73
ERCC1-217ENST00000592905 ADAMTS12P58397 1594 aa25.87■■□□□ 1.73
ERCC1-217ENST00000592905 KIF27Q86VH2 1401 aa25.84■■□□□ 1.73
ERCC1-217ENST00000592905 TRIM41Q8WV44 630 aa25.84■■□□□ 1.73
ERCC1-217ENST00000592905 FHAD1B1AJZ9 1412 aa25.81■■□□□ 1.72
ERCC1-217ENST00000592905 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
ERCC1-217ENST00000592905 RIMBP3CA6NJZ7 1639 aa25.78■■□□□ 1.72
ERCC1-217ENST00000592905 RIMBP3BA6NNM3 1639 aa25.78■■□□□ 1.72
ERCC1-217ENST00000592905 RIMBP3Q9UFD9 1639 aa25.78■■□□□ 1.72
ERCC1-217ENST00000592905 IGF1RP08069 1367 aa25.77■■□□□ 1.72
ERCC1-217ENST00000592905 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
ERCC1-217ENST00000592905 ARHGEF11O15085 1522 aa25.74■■□□□ 1.71
ERCC1-217ENST00000592905 RUSC2Q8N2Y8 1516 aa25.72■■□□□ 1.71
ERCC1-217ENST00000592905 CEP170Q5SW79 1584 aa25.7■■□□□ 1.71
ERCC1-217ENST00000592905 CUL7Q14999 1698 aa25.66■■□□□ 1.7
ERCC1-217ENST00000592905 NUP160Q12769 1436 aa25.65■■□□□ 1.7
ERCC1-217ENST00000592905 CARMIL1Q5VZK9 1371 aa25.62■■□□□ 1.69
ERCC1-217ENST00000592905 CYB5RLQ6IPT4 315 aa25.58■■□□□ 1.69
ERCC1-217ENST00000592905 ARAP1Q96P48 1450 aa25.54■■□□□ 1.68
ERCC1-217ENST00000592905 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
ERCC1-217ENST00000592905 ERCC6L2Q5T890 1561 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms