RNA–Protein interactions for RNA: ENST00000592871.1

LIN37-208, Transcript of lin-37 DREAM MuvB core complex component, humanhuman

TSL 4

Gene LIN37, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN37-208ENST00000592871 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
LIN37-208ENST00000592871 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
LIN37-208ENST00000592871 ABCC9O60706 1549 aa21.96■■□□□ 1.11
LIN37-208ENST00000592871 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
LIN37-208ENST00000592871 NACADO15069 1562 aa21.06■□□□□ 0.96
LIN37-208ENST00000592871 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
LIN37-208ENST00000592871 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
LIN37-208ENST00000592871 MYO15BQ96JP2 1530 aa20.89■□□□□ 0.94
LIN37-208ENST00000592871 DCAF1Q9Y4B6 1507 aa20.79■□□□□ 0.92
LIN37-208ENST00000592871 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
LIN37-208ENST00000592871 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
LIN37-208ENST00000592871 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
LIN37-208ENST00000592871 SCRIBQ14160 1630 aa20.45■□□□□ 0.87
LIN37-208ENST00000592871 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
LIN37-208ENST00000592871 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
LIN37-208ENST00000592871 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
LIN37-208ENST00000592871 CC2D2AQ9P2K1 1620 aa19.86■□□□□ 0.77
LIN37-208ENST00000592871 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
LIN37-208ENST00000592871 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
LIN37-208ENST00000592871 BAZ1AQ9NRL2 1556 aaPredicted RBP19.5■□□□□ 0.71
LIN37-208ENST00000592871 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
LIN37-208ENST00000592871 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
LIN37-208ENST00000592871 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
LIN37-208ENST00000592871 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
LIN37-208ENST00000592871 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
LIN37-208ENST00000592871 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
LIN37-208ENST00000592871 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
LIN37-208ENST00000592871 WIZO95785 1651 aa19.2■□□□□ 0.66
LIN37-208ENST00000592871 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.65
LIN37-208ENST00000592871 NESP48681 1621 aa18.99■□□□□ 0.63
LIN37-208ENST00000592871 TOP2AP11388 1531 aaKnown RBP18.99■□□□□ 0.63
LIN37-208ENST00000592871 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
LIN37-208ENST00000592871 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
LIN37-208ENST00000592871 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
LIN37-208ENST00000592871 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
LIN37-208ENST00000592871 PDS5BQ9NTI5 1447 aa18.78■□□□□ 0.6
LIN37-208ENST00000592871 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
LIN37-208ENST00000592871 CUX2O14529 1486 aa18.73■□□□□ 0.59
LIN37-208ENST00000592871 CFTRP13569 1480 aa18.73■□□□□ 0.59
LIN37-208ENST00000592871 THOC2Q8NI27 1593 aaKnown RBP18.72■□□□□ 0.59
LIN37-208ENST00000592871 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
LIN37-208ENST00000592871 PRDM2Q13029 1718 aa18.64■□□□□ 0.57
LIN37-208ENST00000592871 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
LIN37-208ENST00000592871 SUPT5HO00267 1087 aaKnown RBP18.63■□□□□ 0.57
LIN37-208ENST00000592871 MRC2Q9UBG0 1479 aa18.61■□□□□ 0.57
LIN37-208ENST00000592871 WDR62O43379 1518 aa18.56■□□□□ 0.56
LIN37-208ENST00000592871 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
LIN37-208ENST00000592871 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
LIN37-208ENST00000592871 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
LIN37-208ENST00000592871 ABCC8Q09428 1581 aa18.32■□□□□ 0.52
LIN37-208ENST00000592871 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
LIN37-208ENST00000592871 CUX1P39880 1505 aa18.21■□□□□ 0.51
LIN37-208ENST00000592871 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
LIN37-208ENST00000592871 DNAJC5Q9H3Z4 198 aa18.17■□□□□ 0.5
LIN37-208ENST00000592871 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
LIN37-208ENST00000592871 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
LIN37-208ENST00000592871 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
LIN37-208ENST00000592871 EIF4G3O43432 1585 aaKnown RBP18.12■□□□□ 0.49
LIN37-208ENST00000592871 RAD54L2Q9Y4B4 1467 aa18.11■□□□□ 0.49
LIN37-208ENST00000592871 SOGA1O94964 1423 aa18.09■□□□□ 0.49
LIN37-208ENST00000592871 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
LIN37-208ENST00000592871 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.483e-6■■□□□ 13.8
LIN37-208ENST00000592871 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
LIN37-208ENST00000592871 SYNJ1O43426 1573 aa18.04■□□□□ 0.48
LIN37-208ENST00000592871 TOP2BQ02880 1626 aa18.03■□□□□ 0.48
LIN37-208ENST00000592871 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
LIN37-208ENST00000592871 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
LIN37-208ENST00000592871 ABCA10Q8WWZ4 1543 aa17.96■□□□□ 0.47
LIN37-208ENST00000592871 ABCA5Q8WWZ7 1642 aa17.91■□□□□ 0.46
LIN37-208ENST00000592871 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
LIN37-208ENST00000592871 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
LIN37-208ENST00000592871 GRIN2BQ13224 1484 aa17.9■□□□□ 0.46
LIN37-208ENST00000592871 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
LIN37-208ENST00000592871 SNAPC4Q5SXM2 1469 aa17.9■□□□□ 0.46
LIN37-208ENST00000592871 CHD1O14646 1710 aa17.9■□□□□ 0.46
LIN37-208ENST00000592871 MAGI1Q96QZ7 1491 aaPredicted RBP17.87■□□□□ 0.45
LIN37-208ENST00000592871 FBLN2P98095 1184 aa17.84■□□□□ 0.45
LIN37-208ENST00000592871 SYNJ2O15056 1496 aa17.79■□□□□ 0.44
LIN37-208ENST00000592871 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.44
LIN37-208ENST00000592871 ADAMTS12P58397 1594 aa17.75■□□□□ 0.43
LIN37-208ENST00000592871 ERICH3Q5RHP9 1530 aa17.74■□□□□ 0.43
LIN37-208ENST00000592871 CLASP1Q7Z460 1538 aa17.69■□□□□ 0.42
LIN37-208ENST00000592871 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
LIN37-208ENST00000592871 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
LIN37-208ENST00000592871 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
LIN37-208ENST00000592871 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
LIN37-208ENST00000592871 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
LIN37-208ENST00000592871 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
LIN37-208ENST00000592871 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
LIN37-208ENST00000592871 CEP170Q5SW79 1584 aa17.61■□□□□ 0.41
LIN37-208ENST00000592871 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
LIN37-208ENST00000592871 IGF1RP08069 1367 aa17.6■□□□□ 0.41
LIN37-208ENST00000592871 NUP160Q12769 1436 aa17.6■□□□□ 0.41
LIN37-208ENST00000592871 CUL7Q14999 1698 aa17.59■□□□□ 0.41
LIN37-208ENST00000592871 ARAP1Q96P48 1450 aa17.53■□□□□ 0.4
LIN37-208ENST00000592871 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.39
LIN37-208ENST00000592871 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
LIN37-208ENST00000592871 SHROOM2Q13796 1616 aa17.48■□□□□ 0.39
LIN37-208ENST00000592871 CYB5RLQ6IPT4 315 aa17.48■□□□□ 0.39
LIN37-208ENST00000592871 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms